Protein–RNA interactions for Protein: P18074

ERCC2, TFIIH basal transcription factor complex helicase XPD subunit, humanhuman

Predictions only

Length 760 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC2P18074 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
ERCC2P18074 LPAR5-202ENST00000431922 2695 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
ERCC2P18074 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
ERCC2P18074 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
ERCC2P18074 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
ERCC2P18074 AC004870.1-201ENST00000315132 882 ntBASIC17.74■□□□□ 0.43
ERCC2P18074 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
ERCC2P18074 GOSR2-202ENST00000393456 788 ntTSL 3 BASIC17.74■□□□□ 0.43
ERCC2P18074 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC17.74■□□□□ 0.43
ERCC2P18074 AC079781.3-201ENST00000449110 356 ntBASIC17.74■□□□□ 0.43
ERCC2P18074 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC17.74■□□□□ 0.43
ERCC2P18074 AL589182.2-201ENST00000619332 1049 ntBASIC17.74■□□□□ 0.43
ERCC2P18074 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC17.74■□□□□ 0.43
ERCC2P18074 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
ERCC2P18074 L1CAM-203ENST00000370055 4655 ntTSL 5 BASIC17.74■□□□□ 0.43
ERCC2P18074 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
ERCC2P18074 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
ERCC2P18074 ETV7-207ENST00000620358 1599 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
ERCC2P18074 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
ERCC2P18074 LRRTM1-202ENST00000409148 2126 ntAPPRIS P1 TSL 4 BASIC17.74■□□□□ 0.43
ERCC2P18074 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC17.74■□□□□ 0.43
ERCC2P18074 ZSCAN25-201ENST00000262941 1652 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
ERCC2P18074 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
ERCC2P18074 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
ERCC2P18074 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC17.74■□□□□ 0.43
ERCC2P18074 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
ERCC2P18074 RGS14-201ENST00000408923 2415 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
ERCC2P18074 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
ERCC2P18074 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
ERCC2P18074 ADO-201ENST00000373783 3627 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
ERCC2P18074 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
ERCC2P18074 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
ERCC2P18074 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
ERCC2P18074 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
ERCC2P18074 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
ERCC2P18074 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
ERCC2P18074 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC17.73■□□□□ 0.43
ERCC2P18074 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
ERCC2P18074 TMEM150B-201ENST00000326652 943 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
ERCC2P18074 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
ERCC2P18074 RAB17-203ENST00000409576 466 ntTSL 3 BASIC17.73■□□□□ 0.43
ERCC2P18074 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC17.73■□□□□ 0.43
ERCC2P18074 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
ERCC2P18074 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
ERCC2P18074 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC17.73■□□□□ 0.43
ERCC2P18074 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC17.73■□□□□ 0.43
ERCC2P18074 BAZ1B-201ENST00000339594 6102 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
ERCC2P18074 GPR89P-201ENST00000407924 1495 ntBASIC17.73■□□□□ 0.43
ERCC2P18074 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
ERCC2P18074 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
ERCC2P18074 ARHGEF4-206ENST00000428230 2172 ntTSL 5 BASIC17.73■□□□□ 0.43
ERCC2P18074 ASXL1-202ENST00000375687 7031 ntAPPRIS P2 TSL 5 BASIC17.73■□□□□ 0.43
ERCC2P18074 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
ERCC2P18074 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
ERCC2P18074 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
ERCC2P18074 AP5B1-201ENST00000532090 4811 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
ERCC2P18074 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC17.72■□□□□ 0.43
ERCC2P18074 ABHD3-209ENST00000580981 1836 ntTSL 5 BASIC17.72■□□□□ 0.43
ERCC2P18074 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
ERCC2P18074 ZNF302-202ENST00000446502 2635 ntAPPRIS ALT2 TSL 2 BASIC17.72■□□□□ 0.43
ERCC2P18074 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
ERCC2P18074 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
ERCC2P18074 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
ERCC2P18074 ADGRG2-209ENST00000379876 4779 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
ERCC2P18074 MYC-202ENST00000377970 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
ERCC2P18074 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
ERCC2P18074 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC17.72■□□□□ 0.43
ERCC2P18074 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC17.72■□□□□ 0.43
ERCC2P18074 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC17.72■□□□□ 0.43
ERCC2P18074 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC17.72■□□□□ 0.43
ERCC2P18074 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC17.72■□□□□ 0.43
ERCC2P18074 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC17.72■□□□□ 0.43
ERCC2P18074 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC17.72■□□□□ 0.43
ERCC2P18074 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC17.72■□□□□ 0.43
ERCC2P18074 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC17.72■□□□□ 0.43
ERCC2P18074 AC139887.3-201ENST00000568585 713 ntBASIC17.72■□□□□ 0.43
ERCC2P18074 PNMT-203ENST00000581428 677 ntTSL 2 BASIC17.72■□□□□ 0.43
ERCC2P18074 SDCCAG3P1-201ENST00000589292 1150 ntBASIC17.72■□□□□ 0.43
ERCC2P18074 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
ERCC2P18074 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC17.72■□□□□ 0.43
ERCC2P18074 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
ERCC2P18074 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
ERCC2P18074 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC17.72■□□□□ 0.43
ERCC2P18074 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
ERCC2P18074 HYAL3-205ENST00000450982 1402 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
ERCC2P18074 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC17.72■□□□□ 0.43
ERCC2P18074 AL590787.1-201ENST00000568856 1315 ntBASIC17.72■□□□□ 0.43
ERCC2P18074 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC17.72■□□□□ 0.43
ERCC2P18074 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
ERCC2P18074 ALDH3B1-208ENST00000617288 2078 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
ERCC2P18074 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
ERCC2P18074 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
ERCC2P18074 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC17.71■□□□□ 0.43
ERCC2P18074 OVOL1-203ENST00000532448 1774 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
ERCC2P18074 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
ERCC2P18074 PTDSS1-202ENST00000517309 5177 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
ERCC2P18074 NAA50-209ENST00000497525 1385 ntTSL 2 BASIC17.71■□□□□ 0.43
ERCC2P18074 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
ERCC2P18074 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
ERCC2P18074 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 24.4 ms