Protein–RNA interactions for Protein: P05538

HLA-DQB2, HLA class II histocompatibility antigen, DQ beta 2 chain, humanhuman

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB2P05538 AC139887.3-201ENST00000568585 713 ntBASIC17.48■□□□□ 0.39
HLA-DQB2P05538 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC17.48■□□□□ 0.39
HLA-DQB2P05538 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
HLA-DQB2P05538 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC17.48■□□□□ 0.39
HLA-DQB2P05538 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC17.48■□□□□ 0.39
HLA-DQB2P05538 HCRTR1-203ENST00000403528 2003 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
HLA-DQB2P05538 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC17.48■□□□□ 0.39
HLA-DQB2P05538 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
HLA-DQB2P05538 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC17.48■□□□□ 0.39
HLA-DQB2P05538 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
HLA-DQB2P05538 ARL6IP6-201ENST00000326446 2805 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
HLA-DQB2P05538 OSBP2-211ENST00000446658 2836 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
HLA-DQB2P05538 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC17.47■□□□□ 0.39
HLA-DQB2P05538 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC17.47■□□□□ 0.39
HLA-DQB2P05538 FRMD8P1-201ENST00000440433 1524 ntBASIC17.47■□□□□ 0.39
HLA-DQB2P05538 PCDHA12-202ENST00000613593 2588 ntBASIC17.47■□□□□ 0.39
HLA-DQB2P05538 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
HLA-DQB2P05538 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
HLA-DQB2P05538 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
HLA-DQB2P05538 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC17.47■□□□□ 0.39
HLA-DQB2P05538 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
HLA-DQB2P05538 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
HLA-DQB2P05538 CHRNA5-201ENST00000299565 3623 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
HLA-DQB2P05538 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC17.47■□□□□ 0.39
HLA-DQB2P05538 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
HLA-DQB2P05538 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC17.47■□□□□ 0.39
HLA-DQB2P05538 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC17.47■□□□□ 0.39
HLA-DQB2P05538 FAM197Y8-203ENST00000450145 560 ntBASIC17.47■□□□□ 0.39
HLA-DQB2P05538 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
HLA-DQB2P05538 AC073648.2-201ENST00000510116 352 ntBASIC17.47■□□□□ 0.39
HLA-DQB2P05538 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC17.47■□□□□ 0.39
HLA-DQB2P05538 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC17.47■□□□□ 0.39
HLA-DQB2P05538 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC17.47■□□□□ 0.39
HLA-DQB2P05538 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC17.47■□□□□ 0.39
HLA-DQB2P05538 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
HLA-DQB2P05538 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC17.47■□□□□ 0.39
HLA-DQB2P05538 VPS51-217ENST00000639871 243 ntTSL 5 BASIC17.47■□□□□ 0.39
HLA-DQB2P05538 TNFRSF13B-201ENST00000261652 1357 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
HLA-DQB2P05538 TEX264-215ENST00000611400 1488 ntAPPRIS P3 TSL 5 BASIC17.47■□□□□ 0.39
HLA-DQB2P05538 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
HLA-DQB2P05538 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC17.47■□□□□ 0.39
HLA-DQB2P05538 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
HLA-DQB2P05538 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC17.47■□□□□ 0.39
HLA-DQB2P05538 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC17.47■□□□□ 0.39
HLA-DQB2P05538 DHCR7-201ENST00000355527 2666 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
HLA-DQB2P05538 RBCK1-202ENST00000356286 2774 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
HLA-DQB2P05538 WAC-202ENST00000347934 2839 ntTSL 5 BASIC17.47■□□□□ 0.39
HLA-DQB2P05538 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
HLA-DQB2P05538 AC092068.3-201ENST00000587894 2016 ntBASIC17.47■□□□□ 0.39
HLA-DQB2P05538 B4GALNT2-201ENST00000300404 1906 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
HLA-DQB2P05538 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC17.47■□□□□ 0.39
HLA-DQB2P05538 AD000671.3-202ENST00000591091 1712 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
HLA-DQB2P05538 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC17.47■□□□□ 0.39
HLA-DQB2P05538 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC17.46■□□□□ 0.39
HLA-DQB2P05538 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
HLA-DQB2P05538 AKIRIN1-202ENST00000432648 2741 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
HLA-DQB2P05538 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC17.46■□□□□ 0.39
HLA-DQB2P05538 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC17.46■□□□□ 0.39
HLA-DQB2P05538 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC17.46■□□□□ 0.39
HLA-DQB2P05538 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC17.46■□□□□ 0.39
HLA-DQB2P05538 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
HLA-DQB2P05538 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
HLA-DQB2P05538 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC17.46■□□□□ 0.39
HLA-DQB2P05538 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC17.46■□□□□ 0.39
HLA-DQB2P05538 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC17.46■□□□□ 0.39
HLA-DQB2P05538 FAAHP1-202ENST00000446499 1238 ntBASIC17.46■□□□□ 0.39
HLA-DQB2P05538 AC018712.1-201ENST00000455767 687 ntBASIC17.46■□□□□ 0.39
HLA-DQB2P05538 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC17.46■□□□□ 0.39
HLA-DQB2P05538 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC17.46■□□□□ 0.39
HLA-DQB2P05538 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
HLA-DQB2P05538 RNPS1P1-201ENST00000507437 918 ntBASIC17.46■□□□□ 0.39
HLA-DQB2P05538 PP7080-204ENST00000510714 601 ntTSL 3 BASIC17.46■□□□□ 0.39
HLA-DQB2P05538 TMEM33-208ENST00000513702 1092 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
HLA-DQB2P05538 AC124947.2-201ENST00000547118 1133 ntBASIC17.46■□□□□ 0.39
HLA-DQB2P05538 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC17.46■□□□□ 0.39
HLA-DQB2P05538 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC17.46■□□□□ 0.39
HLA-DQB2P05538 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC17.46■□□□□ 0.39
HLA-DQB2P05538 AC104692.2-201ENST00000603054 253 ntBASIC17.46■□□□□ 0.39
HLA-DQB2P05538 AC004706.3-202ENST00000621574 984 ntBASIC17.46■□□□□ 0.39
HLA-DQB2P05538 AC107918.4-202ENST00000641623 219 ntBASIC17.46■□□□□ 0.39
HLA-DQB2P05538 ZBTB44-201ENST00000357899 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
HLA-DQB2P05538 UBE3D-203ENST00000369747 1917 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
HLA-DQB2P05538 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
HLA-DQB2P05538 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
HLA-DQB2P05538 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC17.46■□□□□ 0.39
HLA-DQB2P05538 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
HLA-DQB2P05538 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC17.46■□□□□ 0.39
HLA-DQB2P05538 HR-201ENST00000312841 5351 ntTSL 5 BASIC17.46■□□□□ 0.39
HLA-DQB2P05538 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC17.46■□□□□ 0.38
HLA-DQB2P05538 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC17.46■□□□□ 0.38
HLA-DQB2P05538 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC17.46■□□□□ 0.38
HLA-DQB2P05538 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC17.45■□□□□ 0.38
HLA-DQB2P05538 ZNF773-201ENST00000282292 2206 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
HLA-DQB2P05538 HNRNPRP1-201ENST00000453465 1695 ntBASIC17.45■□□□□ 0.38
HLA-DQB2P05538 LTBR-207ENST00000539925 1665 ntAPPRIS ALT2 TSL 2 BASIC17.45■□□□□ 0.38
HLA-DQB2P05538 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC17.45■□□□□ 0.38
HLA-DQB2P05538 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
HLA-DQB2P05538 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
HLA-DQB2P05538 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC17.45■□□□□ 0.38
HLA-DQB2P05538 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 39.1 ms