Protein–RNA interactions for Protein: O95749

GGPS1, Geranylgeranyl pyrophosphate synthase, humanhuman

Predictions only

Length 300 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1O95749 GGCT-205ENST00000409436 954 ntTSL 3 BASIC19.32■□□□□ 0.68
GGPS1O95749 AFG3L1P-209ENST00000429663 458 ntTSL 3 BASIC19.32■□□□□ 0.68
GGPS1O95749 MKNK2P1-201ENST00000437526 628 ntBASIC19.32■□□□□ 0.68
GGPS1O95749 CD99L2-206ENST00000466436 988 ntAPPRIS P4 TSL 1 (best) BASIC19.32■□□□□ 0.68
GGPS1O95749 SLC25A6P2-201ENST00000497974 877 ntBASIC19.32■□□□□ 0.68
GGPS1O95749 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC19.32■□□□□ 0.68
GGPS1O95749 AC130456.4-201ENST00000568635 665 ntTSL 2 BASIC19.32■□□□□ 0.68
GGPS1O95749 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC19.32■□□□□ 0.68
GGPS1O95749 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
GGPS1O95749 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC19.32■□□□□ 0.68
GGPS1O95749 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
GGPS1O95749 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
GGPS1O95749 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
GGPS1O95749 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC19.32■□□□□ 0.68
GGPS1O95749 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC19.32■□□□□ 0.68
GGPS1O95749 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC19.32■□□□□ 0.68
GGPS1O95749 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC19.32■□□□□ 0.68
GGPS1O95749 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
GGPS1O95749 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC19.31■□□□□ 0.68
GGPS1O95749 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
GGPS1O95749 LINC02138-201ENST00000378340 1326 ntTSL 2 BASIC19.31■□□□□ 0.68
GGPS1O95749 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
GGPS1O95749 AC133963.1-201ENST00000504166 1679 ntBASIC19.31■□□□□ 0.68
GGPS1O95749 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
GGPS1O95749 RFX3-AS1-201ENST00000423112 552 ntTSL 3 BASIC19.31■□□□□ 0.68
GGPS1O95749 AL162231.1-204ENST00000423809 477 ntAPPRIS ALT2 TSL 3 BASIC19.31■□□□□ 0.68
GGPS1O95749 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC19.31■□□□□ 0.68
GGPS1O95749 AC006042.2-201ENST00000428660 568 ntTSL 4 BASIC19.31■□□□□ 0.68
GGPS1O95749 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC19.31■□□□□ 0.68
GGPS1O95749 FAM185BP-201ENST00000443595 716 ntBASIC19.31■□□□□ 0.68
GGPS1O95749 AC087163.2-201ENST00000457299 853 ntBASIC19.31■□□□□ 0.68
GGPS1O95749 AC063976.1-201ENST00000457890 381 ntTSL 2 BASIC19.31■□□□□ 0.68
GGPS1O95749 AC074386.1-202ENST00000463561 864 ntBASIC19.31■□□□□ 0.68
GGPS1O95749 DDIAS-202ENST00000524921 607 ntAPPRIS ALT2 TSL 4 BASIC19.31■□□□□ 0.68
GGPS1O95749 OVCA2-201ENST00000572195 1122 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
GGPS1O95749 AC007192.2-201ENST00000600364 463 ntTSL 5 BASIC19.31■□□□□ 0.68
GGPS1O95749 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
GGPS1O95749 FAM153A-203ENST00000440605 1966 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
GGPS1O95749 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
GGPS1O95749 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
GGPS1O95749 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
GGPS1O95749 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
GGPS1O95749 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
GGPS1O95749 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
GGPS1O95749 WDR74-204ENST00000525239 1736 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
GGPS1O95749 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
GGPS1O95749 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
GGPS1O95749 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
GGPS1O95749 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
GGPS1O95749 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
GGPS1O95749 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
GGPS1O95749 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
GGPS1O95749 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
GGPS1O95749 ELL2P1-201ENST00000413990 1906 ntBASIC19.3■□□□□ 0.68
GGPS1O95749 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC19.3■□□□□ 0.68
GGPS1O95749 CEND1P1-201ENST00000451006 455 ntBASIC19.3■□□□□ 0.68
GGPS1O95749 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC19.3■□□□□ 0.68
GGPS1O95749 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC19.3■□□□□ 0.68
GGPS1O95749 IL18BP-211ENST00000531053 853 ntAPPRIS ALT2 TSL 2 BASIC19.3■□□□□ 0.68
GGPS1O95749 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC19.3■□□□□ 0.68
GGPS1O95749 MRPL34-205ENST00000600434 793 ntAPPRIS P2 TSL 3 BASIC19.3■□□□□ 0.68
GGPS1O95749 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
GGPS1O95749 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
GGPS1O95749 AC134043.2-201ENST00000624206 2238 ntBASIC19.3■□□□□ 0.68
GGPS1O95749 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
GGPS1O95749 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
GGPS1O95749 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
GGPS1O95749 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC19.3■□□□□ 0.68
GGPS1O95749 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
GGPS1O95749 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC19.3■□□□□ 0.68
GGPS1O95749 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
GGPS1O95749 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
GGPS1O95749 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
GGPS1O95749 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
GGPS1O95749 FAM131A-207ENST00000450976 1335 ntTSL 3 BASIC19.29■□□□□ 0.68
GGPS1O95749 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC19.29■□□□□ 0.68
GGPS1O95749 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
GGPS1O95749 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
GGPS1O95749 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
GGPS1O95749 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
GGPS1O95749 PMS2P2-201ENST00000425039 1128 ntBASIC19.29■□□□□ 0.68
GGPS1O95749 FAM58CP-201ENST00000435741 640 ntBASIC19.29■□□□□ 0.68
GGPS1O95749 DARS-AS1-203ENST00000438432 768 ntTSL 3 BASIC19.29■□□□□ 0.68
GGPS1O95749 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
GGPS1O95749 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC19.29■□□□□ 0.68
GGPS1O95749 ACTL9-202ENST00000612068 1252 ntBASIC19.29■□□□□ 0.68
GGPS1O95749 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC19.29■□□□□ 0.68
GGPS1O95749 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
GGPS1O95749 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
GGPS1O95749 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
GGPS1O95749 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC19.29■□□□□ 0.68
GGPS1O95749 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
GGPS1O95749 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
GGPS1O95749 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC19.29■□□□□ 0.68
GGPS1O95749 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC19.29■□□□□ 0.68
GGPS1O95749 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
GGPS1O95749 TBXAS1-202ENST00000411653 1792 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
GGPS1O95749 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
GGPS1O95749 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
GGPS1O95749 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 38.6 ms