Protein–RNA interactions for Protein: O95197

RTN3, Reticulon-3, humanhuman

Predicted RBP Predictions only

Length 1,032 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3O95197 METTL26-205ENST00000397666 726 ntTSL 2 BASIC18.19■□□□□ 0.5
RTN3O95197 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
RTN3O95197 LBH-204ENST00000406087 559 ntTSL 4 BASIC18.19■□□□□ 0.5
RTN3O95197 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC18.19■□□□□ 0.5
RTN3O95197 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC18.19■□□□□ 0.5
RTN3O95197 AL591424.1-201ENST00000442569 1213 ntBASIC18.19■□□□□ 0.5
RTN3O95197 AC108751.1-201ENST00000490852 363 ntBASIC18.19■□□□□ 0.5
RTN3O95197 RPS15P9-201ENST00000494093 319 ntBASIC18.19■□□□□ 0.5
RTN3O95197 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC18.19■□□□□ 0.5
RTN3O95197 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
RTN3O95197 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC18.19■□□□□ 0.5
RTN3O95197 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC18.19■□□□□ 0.5
RTN3O95197 ARMC7-203ENST00000581078 1002 ntTSL 2 BASIC18.19■□□□□ 0.5
RTN3O95197 SELENOM-210ENST00000611680 689 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
RTN3O95197 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
RTN3O95197 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
RTN3O95197 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
RTN3O95197 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
RTN3O95197 LYSMD4-203ENST00000378904 2122 ntBASIC18.19■□□□□ 0.5
RTN3O95197 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
RTN3O95197 ASIC2-201ENST00000225823 3443 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
RTN3O95197 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC18.18■□□□□ 0.5
RTN3O95197 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC18.18■□□□□ 0.5
RTN3O95197 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC18.18■□□□□ 0.5
RTN3O95197 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
RTN3O95197 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
RTN3O95197 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC18.18■□□□□ 0.5
RTN3O95197 DLG4-201ENST00000302955 3184 ntAPPRIS P3 TSL 5 BASIC18.18■□□□□ 0.5
RTN3O95197 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
RTN3O95197 DLG4-202ENST00000399506 3185 ntAPPRIS ALT1 TSL 2 BASIC18.18■□□□□ 0.5
RTN3O95197 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
RTN3O95197 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
RTN3O95197 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
RTN3O95197 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC18.18■□□□□ 0.5
RTN3O95197 DOC2B-203ENST00000613549 6048 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
RTN3O95197 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC18.18■□□□□ 0.5
RTN3O95197 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
RTN3O95197 PDCD1-201ENST00000334409 2114 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
RTN3O95197 OTOS-202ENST00000391989 645 ntAPPRIS P1 TSL 3 BASIC18.18■□□□□ 0.5
RTN3O95197 MIR503HG-203ENST00000441492 649 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
RTN3O95197 AL807752.7-201ENST00000471521 989 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
RTN3O95197 AC009567.1-201ENST00000515071 525 ntTSL 4 BASIC18.18■□□□□ 0.5
RTN3O95197 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
RTN3O95197 L2HGDH-206ENST00000555610 804 ntTSL 5 BASIC18.18■□□□□ 0.5
RTN3O95197 AC008667.4-201ENST00000607370 168 ntBASIC18.18■□□□□ 0.5
RTN3O95197 FAM197Y3-203ENST00000618346 717 ntBASIC18.18■□□□□ 0.5
RTN3O95197 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
RTN3O95197 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC18.18■□□□□ 0.5
RTN3O95197 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC18.18■□□□□ 0.5
RTN3O95197 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC18.18■□□□□ 0.5
RTN3O95197 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
RTN3O95197 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC18.18■□□□□ 0.5
RTN3O95197 AL162727.3-201ENST00000635661 2787 ntBASIC18.18■□□□□ 0.5
RTN3O95197 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC18.18■□□□□ 0.5
RTN3O95197 CRKL-201ENST00000354336 5325 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
RTN3O95197 DPP6-202ENST00000377770 3710 ntAPPRIS P4 TSL 1 (best) BASIC18.18■□□□□ 0.5
RTN3O95197 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
RTN3O95197 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC18.17■□□□□ 0.5
RTN3O95197 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC18.17■□□□□ 0.5
RTN3O95197 PHACTR3-204ENST00000371015 2728 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
RTN3O95197 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC18.17■□□□□ 0.5
RTN3O95197 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC18.17■□□□□ 0.5
RTN3O95197 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
RTN3O95197 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
RTN3O95197 TSSK2-201ENST00000399635 1816 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
RTN3O95197 U73166.1-201ENST00000439898 2625 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
RTN3O95197 DPY30-201ENST00000295066 631 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
RTN3O95197 DPY30-202ENST00000342166 708 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
RTN3O95197 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
RTN3O95197 AP002414.1-201ENST00000391405 1147 ntBASIC18.17■□□□□ 0.5
RTN3O95197 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC18.17■□□□□ 0.5
RTN3O95197 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
RTN3O95197 TERC-201ENST00000602385 541 ntBASIC18.17■□□□□ 0.5
RTN3O95197 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC18.17■□□□□ 0.5
RTN3O95197 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
RTN3O95197 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
RTN3O95197 AC018695.7-201ENST00000624587 2492 ntBASIC18.17■□□□□ 0.5
RTN3O95197 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
RTN3O95197 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
RTN3O95197 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC18.17■□□□□ 0.5
RTN3O95197 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
RTN3O95197 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
RTN3O95197 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC18.17■□□□□ 0.5
RTN3O95197 GDF5-201ENST00000374369 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
RTN3O95197 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
RTN3O95197 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC18.17■□□□□ 0.5
RTN3O95197 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC18.17■□□□□ 0.5
RTN3O95197 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
RTN3O95197 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
RTN3O95197 AQP1-204ENST00000441328 2487 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
RTN3O95197 WASF1-206ENST00000392588 3122 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
RTN3O95197 DVL1-202ENST00000378891 2926 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
RTN3O95197 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
RTN3O95197 GDE1-201ENST00000353258 2958 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
RTN3O95197 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
RTN3O95197 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
RTN3O95197 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC18.16■□□□□ 0.5
RTN3O95197 DPM3-203ENST00000368400 409 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
RTN3O95197 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC18.16■□□□□ 0.5
RTN3O95197 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC18.16■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 42.9 ms