Protein–RNA interactions for Protein: O94782

USP1, Ubiquitin carboxyl-terminal hydrolase 1, humanhuman

Predictions only

Length 785 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP1O94782 THAP8-201ENST00000292894 1825 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
USP1O94782 ILVBL-209ENST00000534378 2067 ntTSL 5 BASIC17.49■□□□□ 0.39
USP1O94782 RASIP1-201ENST00000222145 3308 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
USP1O94782 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
USP1O94782 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC17.49■□□□□ 0.39
USP1O94782 RAN-212ENST00000543796 2661 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
USP1O94782 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC17.49■□□□□ 0.39
USP1O94782 TTLL11-201ENST00000321582 3250 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
USP1O94782 BRD2-201ENST00000374825 4894 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
USP1O94782 IGF2-205ENST00000416167 5585 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
USP1O94782 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
USP1O94782 FUT8-AS1-201ENST00000621019 1521 ntBASIC17.49■□□□□ 0.39
USP1O94782 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
USP1O94782 FAM86B2-202ENST00000309608 806 ntTSL 3 BASIC17.49■□□□□ 0.39
USP1O94782 CCS-201ENST00000310190 942 ntTSL 5 BASIC17.49■□□□□ 0.39
USP1O94782 CD9-202ENST00000382515 1229 ntTSL 5 BASIC17.49■□□□□ 0.39
USP1O94782 SSR4P1-202ENST00000429427 967 ntTSL 5 BASIC17.49■□□□□ 0.39
USP1O94782 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC17.49■□□□□ 0.39
USP1O94782 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC17.49■□□□□ 0.39
USP1O94782 RAP1B-229ENST00000543393 874 ntTSL 3 BASIC17.49■□□□□ 0.39
USP1O94782 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC17.49■□□□□ 0.39
USP1O94782 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC17.49■□□□□ 0.39
USP1O94782 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
USP1O94782 AC116407.4-201ENST00000623319 1061 ntBASIC17.49■□□□□ 0.39
USP1O94782 CACNA1I-201ENST00000401624 6740 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
USP1O94782 MARCH1-203ENST00000503008 5877 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
USP1O94782 ZDHHC8-202ENST00000334554 5046 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
USP1O94782 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC17.49■□□□□ 0.39
USP1O94782 FAM153A-203ENST00000440605 1966 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
USP1O94782 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC17.49■□□□□ 0.39
USP1O94782 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC17.49■□□□□ 0.39
USP1O94782 AC016734.2-201ENST00000624325 1377 ntBASIC17.49■□□□□ 0.39
USP1O94782 SLC1A4-201ENST00000234256 4561 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
USP1O94782 ZBTB7C-221ENST00000590800 4947 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
USP1O94782 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
USP1O94782 AC106886.4-201ENST00000623557 2502 ntBASIC17.49■□□□□ 0.39
USP1O94782 DIRC2-201ENST00000261038 3596 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
USP1O94782 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
USP1O94782 UBE3D-203ENST00000369747 1917 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
USP1O94782 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
USP1O94782 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
USP1O94782 RHOBTB1-201ENST00000337910 4473 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
USP1O94782 AC074117.1-201ENST00000447070 3060 ntTSL 2 BASIC17.49■□□□□ 0.39
USP1O94782 SLC27A2-201ENST00000267842 2394 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
USP1O94782 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
USP1O94782 HPN-202ENST00000392226 1783 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
USP1O94782 AL162727.3-201ENST00000635661 2787 ntBASIC17.48■□□□□ 0.39
USP1O94782 AFG3L2-201ENST00000269143 3247 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
USP1O94782 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
USP1O94782 RHNO1-209ENST00000618250 2070 ntAPPRIS P3 TSL 4 BASIC17.48■□□□□ 0.39
USP1O94782 FAM135A-205ENST00000418814 6415 ntTSL 5 BASIC17.48■□□□□ 0.39
USP1O94782 ARHGEF4-206ENST00000428230 2172 ntTSL 5 BASIC17.48■□□□□ 0.39
USP1O94782 PRSS16-201ENST00000230582 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
USP1O94782 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
USP1O94782 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
USP1O94782 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
USP1O94782 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
USP1O94782 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
USP1O94782 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
USP1O94782 PCED1CP-201ENST00000419887 785 ntBASIC17.48■□□□□ 0.39
USP1O94782 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC17.48■□□□□ 0.39
USP1O94782 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
USP1O94782 AC091607.1-201ENST00000490318 1060 ntBASIC17.48■□□□□ 0.39
USP1O94782 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC17.48■□□□□ 0.39
USP1O94782 ABR-204ENST00000543210 1049 ntTSL 2 BASIC17.48■□□□□ 0.39
USP1O94782 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC17.48■□□□□ 0.39
USP1O94782 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC17.48■□□□□ 0.39
USP1O94782 ABR-217ENST00000572441 563 ntTSL 4 BASIC17.48■□□□□ 0.39
USP1O94782 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC17.48■□□□□ 0.39
USP1O94782 IGFLR1-209ENST00000592537 1195 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
USP1O94782 AC011467.2-201ENST00000598425 242 ntBASIC17.48■□□□□ 0.39
USP1O94782 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC17.48■□□□□ 0.39
USP1O94782 SUSD4-202ENST00000343846 3480 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
USP1O94782 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC17.48■□□□□ 0.39
USP1O94782 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC17.48■□□□□ 0.39
USP1O94782 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
USP1O94782 SERPINH1-201ENST00000358171 2225 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
USP1O94782 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
USP1O94782 KLHDC7B-201ENST00000395676 2991 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
USP1O94782 AC027796.3-201ENST00000572919 4753 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
USP1O94782 LYPLAL1-202ENST00000366928 1898 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
USP1O94782 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC17.48■□□□□ 0.39
USP1O94782 HRASLS5-206ENST00000540857 3032 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
USP1O94782 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
USP1O94782 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC17.47■□□□□ 0.39
USP1O94782 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC17.47■□□□□ 0.39
USP1O94782 UCHL5-206ENST00000367455 5327 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
USP1O94782 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
USP1O94782 RAB22A-201ENST00000244040 8670 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
USP1O94782 FAM46A-201ENST00000320172 5609 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
USP1O94782 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
USP1O94782 MAP4K1-201ENST00000396857 2653 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
USP1O94782 TRMT44-201ENST00000389737 2799 ntAPPRIS P2 TSL 5 BASIC17.47■□□□□ 0.39
USP1O94782 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
USP1O94782 ZFP64-205ENST00000371518 1841 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
USP1O94782 TSSK2-201ENST00000399635 1816 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
USP1O94782 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
USP1O94782 MIOS-202ENST00000405785 3095 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
USP1O94782 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
USP1O94782 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC17.47■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 34.5 ms