Protein–RNA interactions for Protein: O76070

SNCG, Gamma-synuclein, humanhuman

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNCGO76070 INF2-203ENST00000392634 4672 ntAPPRIS P3 TSL 5 BASIC11.65□□□□□ -0.55
SNCGO76070 LARP4-201ENST00000293618 6296 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
SNCGO76070 TAF5-201ENST00000369839 3268 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
SNCGO76070 ODF2-202ENST00000372791 2375 ntAPPRIS P3 TSL 1 (best) BASIC11.64□□□□□ -0.55
SNCGO76070 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
SNCGO76070 CNPPD1-202ENST00000409789 2073 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
SNCGO76070 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
SNCGO76070 C6orf106-203ENST00000374026 4232 ntAPPRIS ALT2 TSL 2 BASIC11.64□□□□□ -0.55
SNCGO76070 ASCL1-201ENST00000266744 2472 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
SNCGO76070 POP4-201ENST00000221770 2321 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
SNCGO76070 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC11.64□□□□□ -0.55
SNCGO76070 AC005899.8-201ENST00000625127 3153 ntTSL 5 BASIC11.64□□□□□ -0.55
SNCGO76070 SCARA5-201ENST00000354914 4026 ntAPPRIS P1 TSL 2 BASIC11.64□□□□□ -0.55
SNCGO76070 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
SNCGO76070 ETV7-207ENST00000620358 1599 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
SNCGO76070 RFPL2-203ENST00000400237 2407 ntAPPRIS P3 TSL 2 BASIC11.64□□□□□ -0.55
SNCGO76070 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC11.64□□□□□ -0.55
SNCGO76070 TEN1-CDK3-202ENST00000569284 3287 ntAPPRIS P1 TSL 2 BASIC11.64□□□□□ -0.55
SNCGO76070 SLC26A1-202ENST00000398516 3109 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
SNCGO76070 DLGAP2-214ENST00000612087 10088 ntAPPRIS P2 TSL 5 BASIC11.64□□□□□ -0.55
SNCGO76070 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
SNCGO76070 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC11.64□□□□□ -0.55
SNCGO76070 AC068587.9-201ENST00000641814 219 ntBASIC11.64□□□□□ -0.55
SNCGO76070 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
SNCGO76070 DOCK7-203ENST00000404627 2678 ntTSL 2 BASIC11.64□□□□□ -0.55
SNCGO76070 TRIM24-202ENST00000415680 3799 ntAPPRIS ALT2 TSL 1 (best) BASIC11.64□□□□□ -0.55
SNCGO76070 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC11.64□□□□□ -0.55
SNCGO76070 TCF23-201ENST00000296096 4882 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
SNCGO76070 KCTD11-201ENST00000333751 2783 ntAPPRIS P1 BASIC11.64□□□□□ -0.55
SNCGO76070 CAAP1-201ENST00000333916 2791 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
SNCGO76070 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC11.64□□□□□ -0.55
SNCGO76070 ABCG4-205ENST00000619701 3852 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
SNCGO76070 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
SNCGO76070 LINC01010-201ENST00000431422 2069 ntTSL 2 BASIC11.64□□□□□ -0.55
SNCGO76070 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC11.64□□□□□ -0.55
SNCGO76070 MLXIP-208ENST00000538698 5097 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
SNCGO76070 H1F0-201ENST00000340857 2344 ntAPPRIS P1 BASIC11.64□□□□□ -0.55
SNCGO76070 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
SNCGO76070 SELENON-203ENST00000374315 4212 ntAPPRIS ALT2 TSL 5 BASIC11.64□□□□□ -0.55
SNCGO76070 ADAMTS9-210ENST00000498707 7624 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
SNCGO76070 AL499627.1-201ENST00000569373 2188 ntBASIC11.64□□□□□ -0.55
SNCGO76070 SLC6A6-210ENST00000622186 6528 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
SNCGO76070 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC11.64□□□□□ -0.55
SNCGO76070 NSD2-204ENST00000382891 7534 ntAPPRIS P1 TSL 5 BASIC11.64□□□□□ -0.55
SNCGO76070 JPH4-205ENST00000622501 3489 ntAPPRIS ALT1 TSL 5 BASIC11.63□□□□□ -0.55
SNCGO76070 CNTNAP3P2-201ENST00000617175 3861 ntBASIC11.63□□□□□ -0.55
SNCGO76070 GALNT18-201ENST00000227756 2504 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
SNCGO76070 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
SNCGO76070 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC11.63□□□□□ -0.55
SNCGO76070 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
SNCGO76070 HNRNPA1-202ENST00000340913 1842 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
SNCGO76070 MYADML2-201ENST00000409745 2452 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
SNCGO76070 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
SNCGO76070 GSN-206ENST00000394353 2311 ntTSL 2 BASIC11.63□□□□□ -0.55
SNCGO76070 JPH1-201ENST00000342232 4378 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
SNCGO76070 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC11.63□□□□□ -0.55
SNCGO76070 TMC3-AS1-203ENST00000559781 2195 ntTSL 3 BASIC11.63□□□□□ -0.55
SNCGO76070 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
SNCGO76070 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
SNCGO76070 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
SNCGO76070 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
SNCGO76070 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
SNCGO76070 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
SNCGO76070 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC11.63□□□□□ -0.55
SNCGO76070 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
SNCGO76070 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC11.63□□□□□ -0.55
SNCGO76070 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
SNCGO76070 CBX7-201ENST00000216133 4081 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
SNCGO76070 DDX59-206ENST00000447706 2900 ntTSL 2 BASIC11.63□□□□□ -0.55
SNCGO76070 MTMR9LP-203ENST00000426597 1545 ntBASIC11.63□□□□□ -0.55
SNCGO76070 CHAD-203ENST00000508540 1789 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
SNCGO76070 TUSC3-201ENST00000382020 3683 ntAPPRIS ALT1 TSL 1 (best) BASIC11.63□□□□□ -0.55
SNCGO76070 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC11.63□□□□□ -0.55
SNCGO76070 KRT71-201ENST00000267119 2265 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
SNCGO76070 ELK1-203ENST00000376983 2258 ntAPPRIS P3 TSL 1 (best) BASIC11.63□□□□□ -0.55
SNCGO76070 PNPLA5-201ENST00000216177 2539 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
SNCGO76070 PELI3-209ENST00000618547 2508 ntTSL 2 BASIC11.63□□□□□ -0.55
SNCGO76070 SLC18B1-201ENST00000275227 2368 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
SNCGO76070 CD300A-202ENST00000360141 1858 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
SNCGO76070 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC11.63□□□□□ -0.55
SNCGO76070 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC11.63□□□□□ -0.55
SNCGO76070 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC11.63□□□□□ -0.55
SNCGO76070 CACNA1G-225ENST00000512389 6837 ntAPPRIS ALT2 TSL 1 (best) BASIC11.63□□□□□ -0.55
SNCGO76070 FLII-201ENST00000327031 4338 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
SNCGO76070 ZFHX2-205ENST00000615307 1972 ntTSL 2 BASIC11.63□□□□□ -0.55
SNCGO76070 CYTH3-202ENST00000396741 4508 ntAPPRIS ALT1 TSL 5 BASIC11.63□□□□□ -0.55
SNCGO76070 OR1I1-202ENST00000641398 5984 ntAPPRIS P1 BASIC11.63□□□□□ -0.55
SNCGO76070 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
SNCGO76070 ALCAM-201ENST00000306107 4701 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
SNCGO76070 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC11.62□□□□□ -0.55
SNCGO76070 JMJD6-203ENST00000445478 5303 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
SNCGO76070 VWA2-202ENST00000392982 2794 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
SNCGO76070 FAM104A-201ENST00000403627 2798 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
SNCGO76070 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
SNCGO76070 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
SNCGO76070 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC11.62□□□□□ -0.55
SNCGO76070 FGFR1-202ENST00000335922 4157 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
SNCGO76070 PITPNM1-216ENST00000534749 4189 ntAPPRIS P3 TSL 1 (best) BASIC11.62□□□□□ -0.55
SNCGO76070 MYLK-204ENST00000360304 7738 ntAPPRIS ALT2 TSL 5 BASIC11.62□□□□□ -0.55
SNCGO76070 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Retrieved 100 of 98,524 protein–RNA pairs in 57.9 ms