Protein–RNA interactions for Protein: O75131

CPNE3, Copine-3, humanhuman

Known RBP Predictions only

Length 537 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3O75131 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CPNE3O75131 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC16.6■□□□□ 0.25
CPNE3O75131 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC16.6■□□□□ 0.25
CPNE3O75131 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
CPNE3O75131 ANAPC13-206ENST00000514612 1420 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
CPNE3O75131 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
CPNE3O75131 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC16.6■□□□□ 0.25
CPNE3O75131 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC16.6■□□□□ 0.25
CPNE3O75131 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
CPNE3O75131 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC16.59■□□□□ 0.25
CPNE3O75131 AC148477.5-201ENST00000625164 1645 ntBASIC16.59■□□□□ 0.25
CPNE3O75131 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CPNE3O75131 ROCK2-209ENST00000616279 6401 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
CPNE3O75131 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
CPNE3O75131 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC16.59■□□□□ 0.25
CPNE3O75131 CASZ1-202ENST00000377022 7936 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CPNE3O75131 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC16.59■□□□□ 0.25
CPNE3O75131 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
CPNE3O75131 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
CPNE3O75131 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
CPNE3O75131 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
CPNE3O75131 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
CPNE3O75131 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC16.59■□□□□ 0.25
CPNE3O75131 MYO1B-202ENST00000339514 5026 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
CPNE3O75131 CHRNA5-201ENST00000299565 3623 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CPNE3O75131 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC16.59■□□□□ 0.25
CPNE3O75131 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC16.59■□□□□ 0.25
CPNE3O75131 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC16.59■□□□□ 0.25
CPNE3O75131 AC073621.1-201ENST00000392730 636 ntBASIC16.59■□□□□ 0.25
CPNE3O75131 MIR1233-2-201ENST00000408138 82 ntBASIC16.59■□□□□ 0.25
CPNE3O75131 MIR1233-1-201ENST00000408722 82 ntBASIC16.59■□□□□ 0.25
CPNE3O75131 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC16.59■□□□□ 0.25
CPNE3O75131 AC009947.1-201ENST00000444350 727 ntBASIC16.59■□□□□ 0.25
CPNE3O75131 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC16.59■□□□□ 0.25
CPNE3O75131 AC002558.1-201ENST00000488906 803 ntBASIC16.59■□□□□ 0.25
CPNE3O75131 STK19B-204ENST00000512515 211 ntBASIC16.59■□□□□ 0.25
CPNE3O75131 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC16.59■□□□□ 0.25
CPNE3O75131 RNA5SP416-201ENST00000516838 111 ntBASIC16.59■□□□□ 0.25
CPNE3O75131 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
CPNE3O75131 ZPBP2-204ENST00000584588 1277 ntTSL 5 BASIC16.59■□□□□ 0.25
CPNE3O75131 STK25P1-201ENST00000585406 838 ntBASIC16.59■□□□□ 0.25
CPNE3O75131 AL121832.1-201ENST00000615180 677 ntTSL 3 BASIC16.59■□□□□ 0.25
CPNE3O75131 AC139530.3-201ENST00000620344 690 ntBASIC16.59■□□□□ 0.25
CPNE3O75131 AC004706.3-202ENST00000621574 984 ntBASIC16.59■□□□□ 0.25
CPNE3O75131 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
CPNE3O75131 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
CPNE3O75131 FLJ13224-201ENST00000313737 1514 ntBASIC16.59■□□□□ 0.25
CPNE3O75131 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CPNE3O75131 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CPNE3O75131 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC16.59■□□□□ 0.25
CPNE3O75131 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
CPNE3O75131 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CPNE3O75131 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC16.59■□□□□ 0.25
CPNE3O75131 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC16.59■□□□□ 0.25
CPNE3O75131 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CPNE3O75131 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC16.59■□□□□ 0.25
CPNE3O75131 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
CPNE3O75131 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CPNE3O75131 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC16.59■□□□□ 0.25
CPNE3O75131 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC16.59■□□□□ 0.25
CPNE3O75131 MAP7-209ENST00000618822 4497 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
CPNE3O75131 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.25
CPNE3O75131 MARCH1-203ENST00000503008 5877 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
CPNE3O75131 STK4-201ENST00000372801 2038 ntTSL 2 BASIC16.58■□□□□ 0.25
CPNE3O75131 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
CPNE3O75131 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC16.58■□□□□ 0.25
CPNE3O75131 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC16.58■□□□□ 0.25
CPNE3O75131 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
CPNE3O75131 ELAVL2-208ENST00000544538 3789 ntAPPRIS P3 TSL 5 BASIC16.58■□□□□ 0.25
CPNE3O75131 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
CPNE3O75131 AC046158.3-201ENST00000624947 2558 ntBASIC16.58■□□□□ 0.25
CPNE3O75131 BACE1-201ENST00000313005 6326 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
CPNE3O75131 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
CPNE3O75131 BEX3-201ENST00000361298 921 ntTSL 2 BASIC16.58■□□□□ 0.24
CPNE3O75131 MYCLP1-201ENST00000372451 1075 ntBASIC16.58■□□□□ 0.24
CPNE3O75131 MCFD2-205ENST00000409218 648 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.24
CPNE3O75131 C2orf49-202ENST00000410049 854 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
CPNE3O75131 CRCP-205ENST00000431089 942 ntTSL 2 BASIC16.58■□□□□ 0.24
CPNE3O75131 MIR503HG-203ENST00000441492 649 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
CPNE3O75131 PGAM5P1-201ENST00000518923 814 ntBASIC16.58■□□□□ 0.24
CPNE3O75131 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC16.58■□□□□ 0.24
CPNE3O75131 AC243965.1-201ENST00000557595 781 ntTSL 3 BASIC16.58■□□□□ 0.24
CPNE3O75131 CYB561-217ENST00000582997 877 ntTSL 5 BASIC16.58■□□□□ 0.24
CPNE3O75131 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC16.58■□□□□ 0.24
CPNE3O75131 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
CPNE3O75131 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
CPNE3O75131 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
CPNE3O75131 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
CPNE3O75131 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.24
CPNE3O75131 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
CPNE3O75131 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.24
CPNE3O75131 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC16.58■□□□□ 0.24
CPNE3O75131 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC16.58■□□□□ 0.24
CPNE3O75131 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC16.58■□□□□ 0.24
CPNE3O75131 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
CPNE3O75131 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
CPNE3O75131 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
CPNE3O75131 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
CPNE3O75131 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
CPNE3O75131 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 51.4 ms