Protein–RNA interactions for Protein: O60330

PCDHGA12, Protocadherin gamma-A12, humanhuman

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA12O60330 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
PCDHGA12O60330 AC009053.2-201ENST00000563701 2365 ntBASIC17.11■□□□□ 0.33
PCDHGA12O60330 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
PCDHGA12O60330 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
PCDHGA12O60330 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC17.11■□□□□ 0.33
PCDHGA12O60330 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC17.11■□□□□ 0.33
PCDHGA12O60330 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC17.11■□□□□ 0.33
PCDHGA12O60330 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
PCDHGA12O60330 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
PCDHGA12O60330 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
PCDHGA12O60330 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
PCDHGA12O60330 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC17.11■□□□□ 0.33
PCDHGA12O60330 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
PCDHGA12O60330 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
PCDHGA12O60330 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC17.1■□□□□ 0.33
PCDHGA12O60330 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
PCDHGA12O60330 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC17.1■□□□□ 0.33
PCDHGA12O60330 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
PCDHGA12O60330 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
PCDHGA12O60330 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC17.1■□□□□ 0.33
PCDHGA12O60330 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC17.1■□□□□ 0.33
PCDHGA12O60330 ZBTB33-201ENST00000326624 5211 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
PCDHGA12O60330 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC17.1■□□□□ 0.33
PCDHGA12O60330 TECR-201ENST00000215567 1171 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
PCDHGA12O60330 ARMC12-201ENST00000288065 1169 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
PCDHGA12O60330 CD82-202ENST00000342935 967 ntTSL 5 BASIC17.1■□□□□ 0.33
PCDHGA12O60330 PNMT-202ENST00000394246 821 ntTSL 2 BASIC17.1■□□□□ 0.33
PCDHGA12O60330 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
PCDHGA12O60330 MRPL20P1-201ENST00000400819 433 ntBASIC17.1■□□□□ 0.33
PCDHGA12O60330 LINC00899-202ENST00000444890 493 ntTSL 3 BASIC17.1■□□□□ 0.33
PCDHGA12O60330 CEND1P1-201ENST00000451006 455 ntBASIC17.1■□□□□ 0.33
PCDHGA12O60330 AC096734.2-201ENST00000562054 433 ntBASIC17.1■□□□□ 0.33
PCDHGA12O60330 PDPK2P-202ENST00000562415 1191 ntBASIC17.1■□□□□ 0.33
PCDHGA12O60330 AC005306.1-201ENST00000587498 661 ntTSL 3 BASIC17.1■□□□□ 0.33
PCDHGA12O60330 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC17.1■□□□□ 0.33
PCDHGA12O60330 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC17.1■□□□□ 0.33
PCDHGA12O60330 AL078644.1-201ENST00000609881 752 ntBASIC17.1■□□□□ 0.33
PCDHGA12O60330 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC17.1■□□□□ 0.33
PCDHGA12O60330 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
PCDHGA12O60330 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
PCDHGA12O60330 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC17.1■□□□□ 0.33
PCDHGA12O60330 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
PCDHGA12O60330 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC17.1■□□□□ 0.33
PCDHGA12O60330 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
PCDHGA12O60330 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
PCDHGA12O60330 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC17.1■□□□□ 0.33
PCDHGA12O60330 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC17.1■□□□□ 0.33
PCDHGA12O60330 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
PCDHGA12O60330 SYT15-202ENST00000374323 6428 ntTSL 2 BASIC17.1■□□□□ 0.33
PCDHGA12O60330 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC17.1■□□□□ 0.33
PCDHGA12O60330 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
PCDHGA12O60330 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
PCDHGA12O60330 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
PCDHGA12O60330 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
PCDHGA12O60330 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC17.09■□□□□ 0.33
PCDHGA12O60330 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC17.09■□□□□ 0.33
PCDHGA12O60330 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
PCDHGA12O60330 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
PCDHGA12O60330 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
PCDHGA12O60330 IGLL3P-201ENST00000412472 434 ntBASIC17.09■□□□□ 0.33
PCDHGA12O60330 ACTG1P14-201ENST00000446382 1122 ntBASIC17.09■□□□□ 0.33
PCDHGA12O60330 RIN3-211ENST00000557762 517 ntTSL 3 BASIC17.09■□□□□ 0.33
PCDHGA12O60330 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC17.09■□□□□ 0.33
PCDHGA12O60330 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC17.09■□□□□ 0.33
PCDHGA12O60330 STX10-204ENST00000587230 1136 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
PCDHGA12O60330 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC17.09■□□□□ 0.33
PCDHGA12O60330 AC019129.2-201ENST00000609837 1235 ntBASIC17.09■□□□□ 0.33
PCDHGA12O60330 GGTLC5P-201ENST00000617623 998 ntBASIC17.09■□□□□ 0.33
PCDHGA12O60330 ORC5-208ENST00000626700 344 ntTSL 3 BASIC17.09■□□□□ 0.33
PCDHGA12O60330 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
PCDHGA12O60330 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
PCDHGA12O60330 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
PCDHGA12O60330 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC17.09■□□□□ 0.33
PCDHGA12O60330 ADCY6-202ENST00000357869 5748 ntTSL 2 BASIC17.09■□□□□ 0.33
PCDHGA12O60330 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
PCDHGA12O60330 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
PCDHGA12O60330 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
PCDHGA12O60330 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
PCDHGA12O60330 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC17.09■□□□□ 0.33
PCDHGA12O60330 MLXIP-201ENST00000319080 8427 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
PCDHGA12O60330 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.33
PCDHGA12O60330 DMRTA1-201ENST00000325870 5569 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
PCDHGA12O60330 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
PCDHGA12O60330 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.33
PCDHGA12O60330 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC17.08■□□□□ 0.33
PCDHGA12O60330 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC17.08■□□□□ 0.33
PCDHGA12O60330 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
PCDHGA12O60330 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.33
PCDHGA12O60330 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
PCDHGA12O60330 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
PCDHGA12O60330 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.33
PCDHGA12O60330 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC17.08■□□□□ 0.32
PCDHGA12O60330 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
PCDHGA12O60330 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
PCDHGA12O60330 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC17.08■□□□□ 0.32
PCDHGA12O60330 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
PCDHGA12O60330 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC17.08■□□□□ 0.32
PCDHGA12O60330 MIPEPP3-202ENST00000424756 347 ntTSL 3 BASIC17.08■□□□□ 0.32
PCDHGA12O60330 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC17.08■□□□□ 0.32
PCDHGA12O60330 DARS-AS1-203ENST00000438432 768 ntTSL 3 BASIC17.08■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 42.5 ms