Protein–RNA interactions for Protein: O60245

PCDH7, Protocadherin-7, humanhuman

Predictions only

Length 1,069 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH7O60245 DPEP3-201ENST00000268793 2018 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
PCDH7O60245 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
PCDH7O60245 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
PCDH7O60245 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC16.5■□□□□ 0.23
PCDH7O60245 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC16.5■□□□□ 0.23
PCDH7O60245 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC16.5■□□□□ 0.23
PCDH7O60245 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC16.49■□□□□ 0.23
PCDH7O60245 HEYL-201ENST00000372852 3661 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
PCDH7O60245 HHIPL1-201ENST00000330710 7390 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
PCDH7O60245 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
PCDH7O60245 HPN-202ENST00000392226 1783 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
PCDH7O60245 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC16.49■□□□□ 0.23
PCDH7O60245 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
PCDH7O60245 SLC27A2-201ENST00000267842 2394 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
PCDH7O60245 ADAMTS16-201ENST00000274181 4979 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
PCDH7O60245 KLHDC7B-201ENST00000395676 2991 ntAPPRIS P1 BASIC16.49■□□□□ 0.23
PCDH7O60245 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
PCDH7O60245 SRRM2-201ENST00000301740 9353 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
PCDH7O60245 FIBP-202ENST00000357519 1248 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
PCDH7O60245 LYPLAL1-202ENST00000366928 1898 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
PCDH7O60245 TLE4-206ENST00000376552 3695 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
PCDH7O60245 MIR1224-201ENST00000408193 85 ntBASIC16.49■□□□□ 0.23
PCDH7O60245 NUS1P2-201ENST00000417358 873 ntBASIC16.49■□□□□ 0.23
PCDH7O60245 SRP19-202ENST00000445150 833 ntTSL 2 BASIC16.49■□□□□ 0.23
PCDH7O60245 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
PCDH7O60245 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC16.49■□□□□ 0.23
PCDH7O60245 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC16.49■□□□□ 0.23
PCDH7O60245 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
PCDH7O60245 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC16.49■□□□□ 0.23
PCDH7O60245 TPM1-226ENST00000560959 925 ntTSL 2 BASIC16.49■□□□□ 0.23
PCDH7O60245 COX5A-204ENST00000567270 579 ntTSL 3 BASIC16.49■□□□□ 0.23
PCDH7O60245 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
PCDH7O60245 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC16.49■□□□□ 0.23
PCDH7O60245 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
PCDH7O60245 CACNA1A-253ENST00000637927 6847 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
PCDH7O60245 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC16.49■□□□□ 0.23
PCDH7O60245 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC16.49■□□□□ 0.23
PCDH7O60245 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC16.49■□□□□ 0.23
PCDH7O60245 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC16.49■□□□□ 0.23
PCDH7O60245 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
PCDH7O60245 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
PCDH7O60245 NFATC2-206ENST00000609943 5690 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
PCDH7O60245 UBE3D-203ENST00000369747 1917 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
PCDH7O60245 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC16.49■□□□□ 0.23
PCDH7O60245 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC16.48■□□□□ 0.23
PCDH7O60245 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
PCDH7O60245 ARHGAP8-201ENST00000336963 1487 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
PCDH7O60245 AGXT-201ENST00000307503 1865 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
PCDH7O60245 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC16.48■□□□□ 0.23
PCDH7O60245 ADGRG2-202ENST00000354791 4494 ntTSL 5 BASIC16.48■□□□□ 0.23
PCDH7O60245 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
PCDH7O60245 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC16.48■□□□□ 0.23
PCDH7O60245 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC16.48■□□□□ 0.23
PCDH7O60245 AC106886.4-201ENST00000623557 2502 ntBASIC16.48■□□□□ 0.23
PCDH7O60245 APBA2-207ENST00000558402 4031 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
PCDH7O60245 MYC-202ENST00000377970 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
PCDH7O60245 HRASLS5-206ENST00000540857 3032 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
PCDH7O60245 GUCA1B-201ENST00000230361 1113 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
PCDH7O60245 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC16.48■□□□□ 0.23
PCDH7O60245 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
PCDH7O60245 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC16.48■□□□□ 0.23
PCDH7O60245 NT5C-211ENST00000582170 653 ntTSL 3 BASIC16.48■□□□□ 0.23
PCDH7O60245 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
PCDH7O60245 DHRS4L2-211ENST00000621761 1049 ntTSL 5 BASIC16.48■□□□□ 0.23
PCDH7O60245 CCNC-219ENST00000627680 896 ntTSL 5 BASIC16.48■□□□□ 0.23
PCDH7O60245 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC16.48■□□□□ 0.23
PCDH7O60245 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC16.48■□□□□ 0.23
PCDH7O60245 RAB22A-201ENST00000244040 8670 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
PCDH7O60245 PARD3-206ENST00000374776 3389 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
PCDH7O60245 RGS12-203ENST00000344733 5469 ntAPPRIS P4 TSL 1 (best) BASIC16.48■□□□□ 0.23
PCDH7O60245 CNTNAP3-201ENST00000297668 5064 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
PCDH7O60245 GJB3-201ENST00000373362 1797 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
PCDH7O60245 AC005915.1-201ENST00000624912 2018 ntBASIC16.48■□□□□ 0.23
PCDH7O60245 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
PCDH7O60245 TBL2-201ENST00000305632 3161 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
PCDH7O60245 DAPK1-202ENST00000408954 5892 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
PCDH7O60245 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
PCDH7O60245 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
PCDH7O60245 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
PCDH7O60245 PHYH-202ENST00000396913 1732 ntTSL 5 BASIC16.48■□□□□ 0.23
PCDH7O60245 SERPINH1-201ENST00000358171 2225 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
PCDH7O60245 SMCHD1-201ENST00000320876 8821 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
PCDH7O60245 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC16.47■□□□□ 0.23
PCDH7O60245 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
PCDH7O60245 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC16.47■□□□□ 0.23
PCDH7O60245 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
PCDH7O60245 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC16.47■□□□□ 0.23
PCDH7O60245 RXRB-201ENST00000374680 2908 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
PCDH7O60245 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
PCDH7O60245 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC16.47■□□□□ 0.23
PCDH7O60245 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC16.47■□□□□ 0.23
PCDH7O60245 AL357673.1-201ENST00000637610 2542 ntAPPRIS P5 TSL 5 BASIC16.47■□□□□ 0.23
PCDH7O60245 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
PCDH7O60245 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
PCDH7O60245 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
PCDH7O60245 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC16.47■□□□□ 0.23
PCDH7O60245 TMEM213-202ENST00000413208 480 ntAPPRIS ALT2 TSL 3 BASIC16.47■□□□□ 0.23
PCDH7O60245 NAT6-202ENST00000417393 1163 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
PCDH7O60245 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
PCDH7O60245 PNN-202ENST00000553331 656 ntTSL 3 BASIC16.47■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 30.9 ms