Protein–RNA interactions for Protein: O15353

FOXN1, Forkhead box protein N1, humanhuman

Predictions only

Length 648 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN1O15353 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC20.55■□□□□ 0.88
FOXN1O15353 AC079336.1-201ENST00000583156 420 ntTSL 3 BASIC20.55■□□□□ 0.88
FOXN1O15353 AC104985.1-201ENST00000587528 507 ntTSL 3 BASIC20.55■□□□□ 0.88
FOXN1O15353 AL390754.1-201ENST00000619088 582 ntBASIC20.55■□□□□ 0.88
FOXN1O15353 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
FOXN1O15353 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
FOXN1O15353 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
FOXN1O15353 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
FOXN1O15353 CYP51A1P2-201ENST00000419457 1499 ntBASIC20.55■□□□□ 0.88
FOXN1O15353 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC20.55■□□□□ 0.88
FOXN1O15353 FST-202ENST00000396947 2538 ntTSL 5 BASIC20.55■□□□□ 0.88
FOXN1O15353 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
FOXN1O15353 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
FOXN1O15353 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
FOXN1O15353 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
FOXN1O15353 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
FOXN1O15353 PIP5KL1-201ENST00000300432 1104 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
FOXN1O15353 TOMM5-201ENST00000321301 751 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
FOXN1O15353 SNCG-201ENST00000348795 684 ntTSL 2 BASIC20.54■□□□□ 0.88
FOXN1O15353 ITPR1-AS1-201ENST00000412804 858 ntTSL 2 BASIC20.54■□□□□ 0.88
FOXN1O15353 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC20.54■□□□□ 0.88
FOXN1O15353 GABARAPL1-202ENST00000421801 855 ntTSL 2 BASIC20.54■□□□□ 0.88
FOXN1O15353 AC068898.1-201ENST00000440750 335 ntTSL 3 BASIC20.54■□□□□ 0.88
FOXN1O15353 GALT-202ENST00000450095 1280 ntTSL 2 BASIC20.54■□□□□ 0.88
FOXN1O15353 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC20.54■□□□□ 0.88
FOXN1O15353 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC20.54■□□□□ 0.88
FOXN1O15353 PARP8-206ENST00000503665 572 ntTSL 4 BASIC20.54■□□□□ 0.88
FOXN1O15353 AP000777.2-201ENST00000539897 501 ntTSL 4 BASIC20.54■□□□□ 0.88
FOXN1O15353 AC138474.1-201ENST00000586630 523 ntTSL 3 BASIC20.54■□□□□ 0.88
FOXN1O15353 AL132655.2-201ENST00000596276 594 ntBASIC20.54■□□□□ 0.88
FOXN1O15353 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC20.54■□□□□ 0.88
FOXN1O15353 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC20.54■□□□□ 0.88
FOXN1O15353 MYBPH-201ENST00000255416 1805 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
FOXN1O15353 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
FOXN1O15353 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
FOXN1O15353 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC20.54■□□□□ 0.88
FOXN1O15353 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
FOXN1O15353 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
FOXN1O15353 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
FOXN1O15353 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
FOXN1O15353 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
FOXN1O15353 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
FOXN1O15353 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
FOXN1O15353 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
FOXN1O15353 LINC00896-202ENST00000609602 2128 ntBASIC20.53■□□□□ 0.88
FOXN1O15353 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC20.53■□□□□ 0.88
FOXN1O15353 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
FOXN1O15353 LINC01116-202ENST00000339037 838 ntTSL 3 BASIC20.53■□□□□ 0.88
FOXN1O15353 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
FOXN1O15353 SPDYE21P-201ENST00000413323 827 ntBASIC20.53■□□□□ 0.88
FOXN1O15353 PRRT3-AS1-201ENST00000431558 614 ntTSL 2 BASIC20.53■□□□□ 0.88
FOXN1O15353 H2AFV-206ENST00000437072 589 ntTSL 4 BASIC20.53■□□□□ 0.88
FOXN1O15353 DNAJC19-208ENST00000486355 828 ntTSL 2 BASIC20.53■□□□□ 0.88
FOXN1O15353 DNAJC19-209ENST00000491873 769 ntTSL 2 BASIC20.53■□□□□ 0.88
FOXN1O15353 OR10S1-201ENST00000531945 1121 ntAPPRIS P2 BASIC20.53■□□□□ 0.88
FOXN1O15353 HILS1-202ENST00000545329 423 ntBASIC20.53■□□□□ 0.88
FOXN1O15353 CIPC-205ENST00000555437 566 ntTSL 3 BASIC20.53■□□□□ 0.88
FOXN1O15353 COQ9-214ENST00000567933 882 ntTSL 3 BASIC20.53■□□□□ 0.88
FOXN1O15353 AC023141.13-201ENST00000604991 943 ntBASIC20.53■□□□□ 0.88
FOXN1O15353 DUSP13-212ENST00000605915 1015 ntTSL 5 BASIC20.53■□□□□ 0.88
FOXN1O15353 OR10S1-202ENST00000641123 1121 ntAPPRIS ALT2 BASIC20.53■□□□□ 0.88
FOXN1O15353 KRT8P47-201ENST00000604727 1398 ntBASIC20.53■□□□□ 0.88
FOXN1O15353 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC20.53■□□□□ 0.88
FOXN1O15353 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
FOXN1O15353 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC20.53■□□□□ 0.88
FOXN1O15353 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
FOXN1O15353 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
FOXN1O15353 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
FOXN1O15353 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC20.53■□□□□ 0.88
FOXN1O15353 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
FOXN1O15353 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
FOXN1O15353 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC20.52■□□□□ 0.88
FOXN1O15353 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
FOXN1O15353 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
FOXN1O15353 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC20.52■□□□□ 0.88
FOXN1O15353 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC20.52■□□□□ 0.88
FOXN1O15353 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
FOXN1O15353 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC20.52■□□□□ 0.88
FOXN1O15353 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC20.52■□□□□ 0.88
FOXN1O15353 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
FOXN1O15353 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC20.52■□□□□ 0.88
FOXN1O15353 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
FOXN1O15353 C12orf10-201ENST00000267103 1192 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
FOXN1O15353 CD37-201ENST00000323906 1265 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
FOXN1O15353 C9orf24-204ENST00000379127 596 ntTSL 3 BASIC20.52■□□□□ 0.88
FOXN1O15353 FLG-AS1-204ENST00000420707 906 ntTSL 5 BASIC20.52■□□□□ 0.88
FOXN1O15353 AC107890.1-201ENST00000422478 521 ntBASIC20.52■□□□□ 0.88
FOXN1O15353 RPS2P32-201ENST00000439199 892 ntBASIC20.52■□□□□ 0.88
FOXN1O15353 AC106772.1-201ENST00000506629 591 ntTSL 3 BASIC20.52■□□□□ 0.88
FOXN1O15353 TBX18-206ENST00000606784 1230 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
FOXN1O15353 AC007064.4-201ENST00000637740 555 ntBASIC20.52■□□□□ 0.88
FOXN1O15353 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
FOXN1O15353 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC20.52■□□□□ 0.88
FOXN1O15353 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.87
FOXN1O15353 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
FOXN1O15353 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
FOXN1O15353 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC20.51■□□□□ 0.87
FOXN1O15353 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
FOXN1O15353 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
FOXN1O15353 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 64.8 ms