Protein–RNA interactions for Protein: O14646

CHD1, Chromodomain-helicase-DNA-binding protein 1, humanhuman

Predictions only

Length 1,710 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1O14646 SS18L1-202ENST00000370848 1238 ntTSL 1 (best) BASIC27.43■■□□□ 1.98
CHD1O14646 TPSD1-202ENST00000397534 896 ntAPPRIS ALT2 TSL 5 BASIC27.43■■□□□ 1.98
CHD1O14646 MIR1247-201ENST00000408206 136 ntBASIC27.43■■□□□ 1.98
CHD1O14646 ZNF767P-206ENST00000513792 565 ntBASIC27.43■■□□□ 1.98
CHD1O14646 AC124067.4-202ENST00000522471 397 ntTSL 3 BASIC27.43■■□□□ 1.98
CHD1O14646 TPRX2P-201ENST00000535362 881 ntBASIC27.43■■□□□ 1.98
CHD1O14646 AC123567.1-201ENST00000548294 1261 ntBASIC27.43■■□□□ 1.98
CHD1O14646 AC013451.1-201ENST00000554552 518 ntTSL 4 BASIC27.43■■□□□ 1.98
CHD1O14646 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC27.43■■□□□ 1.98
CHD1O14646 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC27.43■■□□□ 1.98
CHD1O14646 REEP1-208ENST00000538924 1702 ntTSL 5 BASIC27.43■■□□□ 1.98
CHD1O14646 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC27.42■■□□□ 1.98
CHD1O14646 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC27.42■■□□□ 1.98
CHD1O14646 PSORS1C3-201ENST00000412143 593 ntTSL 1 (best) BASIC27.42■■□□□ 1.98
CHD1O14646 RAB34-206ENST00000415040 1293 ntTSL 2 BASIC27.42■■□□□ 1.98
CHD1O14646 TMEM176B-202ENST00000429904 1206 ntAPPRIS P1 TSL 2 BASIC27.42■■□□□ 1.98
CHD1O14646 C9orf41-AS1-201ENST00000455609 719 ntTSL 1 (best) BASIC27.42■■□□□ 1.98
CHD1O14646 AC136475.5-202ENST00000524824 587 ntTSL 4 BASIC27.42■■□□□ 1.98
CHD1O14646 AC099795.1-202ENST00000640492 759 ntTSL 5 BASIC27.42■■□□□ 1.98
CHD1O14646 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC27.42■■□□□ 1.98
CHD1O14646 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC27.42■■□□□ 1.98
CHD1O14646 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC27.42■■□□□ 1.98
CHD1O14646 TDRKH-202ENST00000368823 2751 ntAPPRIS ALT1 TSL 2 BASIC27.42■■□□□ 1.98
CHD1O14646 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC27.42■■□□□ 1.98
CHD1O14646 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC27.42■■□□□ 1.98
CHD1O14646 SPIRE1-202ENST00000409402 5665 ntAPPRIS ALT2 TSL 1 (best) BASIC27.41■■□□□ 1.98
CHD1O14646 AL139158.2-202ENST00000428151 573 ntTSL 3 BASIC27.41■■□□□ 1.98
CHD1O14646 HIST2H2BA-202ENST00000430394 752 ntTSL 1 (best) BASIC27.41■■□□□ 1.98
CHD1O14646 CDKN2AIP-205ENST00000510928 860 ntTSL 2 BASIC27.41■■□□□ 1.98
CHD1O14646 TMEM219-203ENST00000561899 1249 ntAPPRIS P1 TSL 2 BASIC27.41■■□□□ 1.98
CHD1O14646 KREMEN1-203ENST00000407188 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC27.41■■□□□ 1.98
CHD1O14646 HARS-204ENST00000438307 1789 ntTSL 2 BASIC27.41■■□□□ 1.98
CHD1O14646 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC27.41■■□□□ 1.98
CHD1O14646 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC27.41■■□□□ 1.98
CHD1O14646 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC27.41■■□□□ 1.98
CHD1O14646 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC27.41■■□□□ 1.98
CHD1O14646 LINC01185-202ENST00000452343 1705 ntTSL 2 BASIC27.41■■□□□ 1.98
CHD1O14646 GOLGA2P4-201ENST00000441462 777 ntBASIC27.41■■□□□ 1.98
CHD1O14646 AC006001.2-201ENST00000448096 393 ntTSL 3 BASIC27.41■■□□□ 1.98
CHD1O14646 AC092910.3-202ENST00000469070 982 ntTSL 3 BASIC27.41■■□□□ 1.98
CHD1O14646 WT1-AS_2.1-201ENST00000613208 137 ntBASIC27.41■■□□□ 1.98
CHD1O14646 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC27.4■■□□□ 1.98
CHD1O14646 TXNDC2-204ENST00000536353 1703 ntTSL 5 BASIC27.4■■□□□ 1.98
CHD1O14646 HIST1H2AC-203ENST00000602637 1462 ntAPPRIS P1 TSL 2 BASIC27.4■■□□□ 1.98
CHD1O14646 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC27.4■■□□□ 1.98
CHD1O14646 AFG3L1P-217ENST00000557444 2447 ntBASIC27.4■■□□□ 1.98
CHD1O14646 TAF8-204ENST00000456846 1293 ntAPPRIS ALT1 TSL 1 (best) BASIC27.4■■□□□ 1.98
CHD1O14646 NEU3-203ENST00000529024 581 ntTSL 3 BASIC27.4■■□□□ 1.98
CHD1O14646 COQ7-202ENST00000544894 819 ntAPPRIS ALT2 TSL 1 (best) BASIC27.4■■□□□ 1.98
CHD1O14646 PFN1-203ENST00000574872 1173 ntTSL 2 BASIC27.4■■□□□ 1.98
CHD1O14646 AC111170.2-201ENST00000585369 768 ntTSL 3 BASIC27.4■■□□□ 1.98
CHD1O14646 C19orf53-206ENST00000593274 491 ntTSL 2 BASIC27.4■■□□□ 1.98
CHD1O14646 SRD5A3P1-201ENST00000603021 949 ntBASIC27.4■■□□□ 1.98
CHD1O14646 AL139327.4-201ENST00000612362 153 ntBASIC27.4■■□□□ 1.98
CHD1O14646 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC27.4■■□□□ 1.98
CHD1O14646 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC27.4■■□□□ 1.98
CHD1O14646 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC27.4■■□□□ 1.98
CHD1O14646 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC27.39■■□□□ 1.98
CHD1O14646 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC27.39■■□□□ 1.98
CHD1O14646 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC27.39■■□□□ 1.98
CHD1O14646 AURKAIP1-201ENST00000321751 798 ntAPPRIS P1 TSL 2 BASIC27.39■■□□□ 1.98
CHD1O14646 NFIC-201ENST00000341919 1573 ntTSL 1 (best) BASIC27.39■■□□□ 1.98
CHD1O14646 TPT1-AS1-203ENST00000412946 744 ntTSL 3 BASIC27.39■■□□□ 1.98
CHD1O14646 Z82214.2-201ENST00000420269 531 ntTSL 4 BASIC27.39■■□□□ 1.98
CHD1O14646 PLTP-204ENST00000420868 1420 ntTSL 2 BASIC27.39■■□□□ 1.98
CHD1O14646 AL606534.2-205ENST00000437691 346 ntTSL 5 BASIC27.39■■□□□ 1.98
CHD1O14646 MYCLP2-201ENST00000449268 967 ntBASIC27.39■■□□□ 1.98
CHD1O14646 AL589987.1-201ENST00000453380 819 ntBASIC27.39■■□□□ 1.98
CHD1O14646 AC010319.3-201ENST00000597028 470 ntBASIC27.39■■□□□ 1.98
CHD1O14646 IRF3-217ENST00000597198 1741 ntAPPRIS P1 TSL 2 BASIC27.39■■□□□ 1.98
CHD1O14646 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC27.39■■□□□ 1.98
CHD1O14646 CDIP1-206ENST00000563507 1463 ntTSL 2 BASIC27.39■■□□□ 1.98
CHD1O14646 TUBB1P2-201ENST00000422712 1306 ntBASIC27.39■■□□□ 1.98
CHD1O14646 TUBB1P1-201ENST00000503144 1300 ntBASIC27.39■■□□□ 1.98
CHD1O14646 FAM153A-203ENST00000440605 1966 ntAPPRIS P2 TSL 1 (best) BASIC27.39■■□□□ 1.98
CHD1O14646 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC27.39■■□□□ 1.98
CHD1O14646 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC27.39■■□□□ 1.97
CHD1O14646 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC27.39■■□□□ 1.97
CHD1O14646 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC27.39■■□□□ 1.97
CHD1O14646 AP000997.3-201ENST00000623333 2250 ntBASIC27.39■■□□□ 1.97
CHD1O14646 BOLA2P3-201ENST00000404566 256 ntBASIC27.38■■□□□ 1.97
CHD1O14646 TMEM191A-209ENST00000452055 788 ntTSL 2 BASIC27.38■■□□□ 1.97
CHD1O14646 OSGIN2-203ENST00000520659 801 ntTSL 2 BASIC27.38■■□□□ 1.97
CHD1O14646 AL583810.1-201ENST00000553344 1045 ntBASIC27.38■■□□□ 1.97
CHD1O14646 AC105021.1-202ENST00000570572 669 ntBASIC27.38■■□□□ 1.97
CHD1O14646 AC015936.2-201ENST00000593177 259 ntBASIC27.38■■□□□ 1.97
CHD1O14646 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC27.38■■□□□ 1.97
CHD1O14646 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC27.38■■□□□ 1.97
CHD1O14646 RAB29-201ENST00000235932 1723 ntAPPRIS P1 TSL 1 (best) BASIC27.38■■□□□ 1.97
CHD1O14646 TACR2-202ENST00000373307 1740 ntTSL 2 BASIC27.38■■□□□ 1.97
CHD1O14646 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC27.38■■□□□ 1.97
CHD1O14646 EPHX2-204ENST00000518379 1959 ntAPPRIS ALT2 TSL 5 BASIC27.38■■□□□ 1.97
CHD1O14646 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC27.38■■□□□ 1.97
CHD1O14646 FTH1-201ENST00000273550 1229 ntAPPRIS P1 TSL 1 (best) BASIC27.38■■□□□ 1.97
CHD1O14646 AF274855.1-203ENST00000424126 800 ntTSL 3 BASIC27.38■■□□□ 1.97
CHD1O14646 LINC01784-201ENST00000438401 378 ntTSL 2 BASIC27.38■■□□□ 1.97
CHD1O14646 FTH1-202ENST00000526640 786 ntTSL 2 BASIC27.38■■□□□ 1.97
CHD1O14646 TMEM265-201ENST00000615541 995 ntAPPRIS P1 TSL 1 (best) BASIC27.38■■□□□ 1.97
CHD1O14646 TMEM114-205ENST00000624696 560 ntTSL 2 BASIC27.38■■□□□ 1.97
CHD1O14646 RETN-203ENST00000629642 400 ntTSL 5 BASIC27.38■■□□□ 1.97
Retrieved 100 of 98,524 protein–RNA pairs in 24.8 ms