Protein–RNA interactions for Protein: O00501

CLDN5, Claudin-5, humanhuman

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN5O00501 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CLDN5O00501 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CLDN5O00501 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC18.17■□□□□ 0.5
CLDN5O00501 KCNV2-201ENST00000382082 2186 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CLDN5O00501 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
CLDN5O00501 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC18.17■□□□□ 0.5
CLDN5O00501 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CLDN5O00501 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC18.16■□□□□ 0.5
CLDN5O00501 RHOBTB1-201ENST00000337910 4473 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CLDN5O00501 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC18.16■□□□□ 0.5
CLDN5O00501 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
CLDN5O00501 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CLDN5O00501 GAR1-202ENST00000394631 1011 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CLDN5O00501 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
CLDN5O00501 KRT18P3-201ENST00000451602 1288 ntBASIC18.16■□□□□ 0.5
CLDN5O00501 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC18.16■□□□□ 0.5
CLDN5O00501 HS6ST1P1-201ENST00000481504 1234 ntBASIC18.16■□□□□ 0.5
CLDN5O00501 FGFR1OP2-206ENST00000546072 956 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
CLDN5O00501 DYNLL1-204ENST00000548214 616 ntTSL 2 BASIC18.16■□□□□ 0.5
CLDN5O00501 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC18.16■□□□□ 0.5
CLDN5O00501 TCAP-202ENST00000578283 583 ntTSL 5 BASIC18.16■□□□□ 0.5
CLDN5O00501 CYB561-216ENST00000582297 897 ntTSL 3 BASIC18.16■□□□□ 0.5
CLDN5O00501 AC064836.3-201ENST00000607928 673 ntBASIC18.16■□□□□ 0.5
CLDN5O00501 CAND2-206ENST00000626378 333 ntTSL 5 BASIC18.16■□□□□ 0.5
CLDN5O00501 EPHX2-204ENST00000518379 1959 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
CLDN5O00501 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC18.16■□□□□ 0.5
CLDN5O00501 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
CLDN5O00501 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
CLDN5O00501 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CLDN5O00501 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC18.16■□□□□ 0.5
CLDN5O00501 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CLDN5O00501 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
CLDN5O00501 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC18.15■□□□□ 0.5
CLDN5O00501 ASB10-202ENST00000377867 1738 ntTSL 2 BASIC18.15■□□□□ 0.5
CLDN5O00501 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
CLDN5O00501 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
CLDN5O00501 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC18.15■□□□□ 0.5
CLDN5O00501 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
CLDN5O00501 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
CLDN5O00501 FABP5-202ENST00000396359 986 ntTSL 5 BASIC18.15■□□□□ 0.5
CLDN5O00501 MRPL20P1-201ENST00000400819 433 ntBASIC18.15■□□□□ 0.5
CLDN5O00501 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC18.15■□□□□ 0.5
CLDN5O00501 CRYGEP-201ENST00000412192 528 ntBASIC18.15■□□□□ 0.5
CLDN5O00501 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC18.15■□□□□ 0.5
CLDN5O00501 VN2R19P-201ENST00000442399 1052 ntBASIC18.15■□□□□ 0.5
CLDN5O00501 PAWRP1-201ENST00000451083 565 ntBASIC18.15■□□□□ 0.5
CLDN5O00501 TPD52L1-211ENST00000532429 1022 ntTSL 2 BASIC18.15■□□□□ 0.5
CLDN5O00501 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC18.15■□□□□ 0.5
CLDN5O00501 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC18.15■□□□□ 0.5
CLDN5O00501 FAM197Y3-203ENST00000618346 717 ntBASIC18.15■□□□□ 0.5
CLDN5O00501 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
CLDN5O00501 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
CLDN5O00501 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
CLDN5O00501 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
CLDN5O00501 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CLDN5O00501 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CLDN5O00501 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
CLDN5O00501 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CLDN5O00501 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC18.15■□□□□ 0.5
CLDN5O00501 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CLDN5O00501 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC18.15■□□□□ 0.5
CLDN5O00501 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC18.15■□□□□ 0.5
CLDN5O00501 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC18.15■□□□□ 0.5
CLDN5O00501 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
CLDN5O00501 PCCB-201ENST00000251654 1833 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.5
CLDN5O00501 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CLDN5O00501 EGFEM1P-202ENST00000431685 1563 ntBASIC18.14■□□□□ 0.49
CLDN5O00501 ENC1-201ENST00000302351 5520 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CLDN5O00501 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC18.14■□□□□ 0.49
CLDN5O00501 DPY30-201ENST00000295066 631 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CLDN5O00501 DPY30-202ENST00000342166 708 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CLDN5O00501 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
CLDN5O00501 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC18.14■□□□□ 0.49
CLDN5O00501 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC18.14■□□□□ 0.49
CLDN5O00501 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC18.14■□□□□ 0.49
CLDN5O00501 PGAM5P1-201ENST00000518923 814 ntBASIC18.14■□□□□ 0.49
CLDN5O00501 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC18.14■□□□□ 0.49
CLDN5O00501 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC18.14■□□□□ 0.49
CLDN5O00501 GGTLC5P-201ENST00000617623 998 ntBASIC18.14■□□□□ 0.49
CLDN5O00501 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
CLDN5O00501 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC18.14■□□□□ 0.49
CLDN5O00501 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC18.14■□□□□ 0.49
CLDN5O00501 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC18.14■□□□□ 0.49
CLDN5O00501 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CLDN5O00501 LINC01657-201ENST00000457217 1809 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
CLDN5O00501 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.49
CLDN5O00501 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
CLDN5O00501 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CLDN5O00501 PLCB2-202ENST00000456256 4242 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
CLDN5O00501 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
CLDN5O00501 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CLDN5O00501 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CLDN5O00501 PF4-201ENST00000296029 604 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CLDN5O00501 IGLL3P-201ENST00000412472 434 ntBASIC18.13■□□□□ 0.49
CLDN5O00501 HCG4B-203ENST00000450128 991 ntBASIC18.13■□□□□ 0.49
CLDN5O00501 AC087163.2-201ENST00000457299 853 ntBASIC18.13■□□□□ 0.49
CLDN5O00501 SLC25A6P2-201ENST00000497974 877 ntBASIC18.13■□□□□ 0.49
CLDN5O00501 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC18.13■□□□□ 0.49
CLDN5O00501 CALM1-205ENST00000553542 877 ntTSL 5 BASIC18.13■□□□□ 0.49
CLDN5O00501 AC018845.2-201ENST00000568326 409 ntBASIC18.13■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 45.1 ms