Protein–RNA interactions for Protein: H7C350

CCDC188, Coiled-coil domain-containing protein 188, humanhuman

Predictions only

Length 402 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC188H7C350 PRKCSH-217ENST00000592741 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
CCDC188H7C350 SH2B1-203ENST00000359285 3033 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
CCDC188H7C350 AGK-211ENST00000629555 2765 ntTSL 5 BASIC17.95■□□□□ 0.46
CCDC188H7C350 ELK1-203ENST00000376983 2258 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
CCDC188H7C350 ATG5-210ENST00000636437 2261 ntTSL 5 BASIC17.95■□□□□ 0.46
CCDC188H7C350 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
CCDC188H7C350 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CCDC188H7C350 WNK2-201ENST00000297954 7138 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
CCDC188H7C350 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
CCDC188H7C350 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CCDC188H7C350 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC17.95■□□□□ 0.46
CCDC188H7C350 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CCDC188H7C350 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
CCDC188H7C350 AC103564.2-201ENST00000432853 1299 ntBASIC17.95■□□□□ 0.46
CCDC188H7C350 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
CCDC188H7C350 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
CCDC188H7C350 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC17.95■□□□□ 0.46
CCDC188H7C350 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC17.95■□□□□ 0.46
CCDC188H7C350 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC17.95■□□□□ 0.46
CCDC188H7C350 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC17.95■□□□□ 0.46
CCDC188H7C350 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC17.95■□□□□ 0.46
CCDC188H7C350 BRIX1-201ENST00000336767 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CCDC188H7C350 COL23A1-202ENST00000407622 2329 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
CCDC188H7C350 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CCDC188H7C350 NBL1-211ENST00000618761 2051 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
CCDC188H7C350 CHFR-203ENST00000432561 2648 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CCDC188H7C350 ABTB1-201ENST00000232744 1965 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CCDC188H7C350 HLA-A-202ENST00000376806 1854 ntBASIC17.95■□□□□ 0.46
CCDC188H7C350 SPTBN4-212ENST00000598249 8070 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
CCDC188H7C350 KHNYN-202ENST00000553935 3359 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CCDC188H7C350 LARP4B-211ENST00000612396 8546 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
CCDC188H7C350 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC17.94■□□□□ 0.46
CCDC188H7C350 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC17.94■□□□□ 0.46
CCDC188H7C350 BTBD11-205ENST00000490090 4614 ntTSL 2 BASIC17.94■□□□□ 0.46
CCDC188H7C350 ACAT2-201ENST00000367048 3180 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CCDC188H7C350 SLC37A4-217ENST00000545985 2606 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
CCDC188H7C350 HDHD2-201ENST00000300605 2212 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CCDC188H7C350 CYP2R1-201ENST00000334636 2235 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CCDC188H7C350 DVL1-202ENST00000378891 2926 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
CCDC188H7C350 JRK-211ENST00000615982 2823 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
CCDC188H7C350 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CCDC188H7C350 SLC7A5-201ENST00000261622 4537 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CCDC188H7C350 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
CCDC188H7C350 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CCDC188H7C350 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC17.94■□□□□ 0.46
CCDC188H7C350 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
CCDC188H7C350 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC17.94■□□□□ 0.46
CCDC188H7C350 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC17.94■□□□□ 0.46
CCDC188H7C350 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC17.94■□□□□ 0.46
CCDC188H7C350 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC17.94■□□□□ 0.46
CCDC188H7C350 MOGAT1-201ENST00000446656 1048 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
CCDC188H7C350 DMKN-215ENST00000451297 1111 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
CCDC188H7C350 COX11P1-201ENST00000489116 835 ntBASIC17.94■□□□□ 0.46
CCDC188H7C350 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC17.94■□□□□ 0.46
CCDC188H7C350 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC17.94■□□□□ 0.46
CCDC188H7C350 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC17.94■□□□□ 0.46
CCDC188H7C350 F3-201ENST00000334047 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CCDC188H7C350 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CCDC188H7C350 AL049757.1-201ENST00000616842 1596 ntBASIC17.94■□□□□ 0.46
CCDC188H7C350 ELN-206ENST00000380553 2703 ntAPPRIS ALT2 TSL 2 BASIC17.94■□□□□ 0.46
CCDC188H7C350 ADAMTS13-206ENST00000371929 4934 ntAPPRIS P4 TSL 1 (best) BASIC17.94■□□□□ 0.46
CCDC188H7C350 AL031282.2-201ENST00000598846 5079 ntTSL 2 BASIC17.94■□□□□ 0.46
CCDC188H7C350 ZSCAN10-201ENST00000252463 2463 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
CCDC188H7C350 SALL3-202ENST00000537592 6555 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
CCDC188H7C350 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC17.94■□□□□ 0.46
CCDC188H7C350 BSG-203ENST00000353555 1616 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
CCDC188H7C350 TUBGCP2-202ENST00000368562 2685 ntTSL 2 BASIC17.94■□□□□ 0.46
CCDC188H7C350 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CCDC188H7C350 RAN-212ENST00000543796 2661 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CCDC188H7C350 CRTC3-202ENST00000420329 5209 ntAPPRIS ALT1 TSL 2 BASIC17.94■□□□□ 0.46
CCDC188H7C350 ZNF324-203ENST00000536459 5653 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
CCDC188H7C350 TMTC4-203ENST00000376234 3483 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CCDC188H7C350 ARSI-201ENST00000328668 3161 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CCDC188H7C350 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
CCDC188H7C350 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
CCDC188H7C350 KLF10-202ENST00000395884 3659 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
CCDC188H7C350 EIF4ENIF1-206ENST00000397525 3695 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CCDC188H7C350 EDN3-202ENST00000337938 2636 ntAPPRIS P4 TSL 1 (best) BASIC17.93■□□□□ 0.46
CCDC188H7C350 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC17.93■□□□□ 0.46
CCDC188H7C350 AC136759.1-201ENST00000534201 2163 ntTSL 2 BASIC17.93■□□□□ 0.46
CCDC188H7C350 PIGP-207ENST00000464265 3437 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
CCDC188H7C350 REPS1-208ENST00000450536 4537 ntAPPRIS ALT1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CCDC188H7C350 PON2-201ENST00000222572 1745 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CCDC188H7C350 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC17.93■□□□□ 0.46
CCDC188H7C350 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
CCDC188H7C350 HYAL3-205ENST00000450982 1402 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
CCDC188H7C350 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC17.93■□□□□ 0.46
CCDC188H7C350 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC17.93■□□□□ 0.46
CCDC188H7C350 ANTXR1-201ENST00000303714 5859 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CCDC188H7C350 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC17.93■□□□□ 0.46
CCDC188H7C350 GXYLT1P3-201ENST00000453058 1193 ntBASIC17.93■□□□□ 0.46
CCDC188H7C350 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
CCDC188H7C350 AC092597.1-201ENST00000487352 616 ntBASIC17.93■□□□□ 0.46
CCDC188H7C350 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
CCDC188H7C350 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
CCDC188H7C350 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC17.93■□□□□ 0.46
CCDC188H7C350 STK25P1-201ENST00000585406 838 ntBASIC17.93■□□□□ 0.46
CCDC188H7C350 AC005332.3-201ENST00000589904 676 ntBASIC17.93■□□□□ 0.46
CCDC188H7C350 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC17.93■□□□□ 0.46
CCDC188H7C350 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC17.93■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 28.6 ms