Protein–RNA interactions for Protein: F8WFD2

NPIPA3, Nuclear pore complex-interacting protein family member A3, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA3F8WFD2 NTRK2-207ENST00000376214 5608 ntAPPRIS P3 TSL 5 BASIC15.74■□□□□ 0.11
NPIPA3F8WFD2 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
NPIPA3F8WFD2 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC15.73■□□□□ 0.11
NPIPA3F8WFD2 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC15.73■□□□□ 0.11
NPIPA3F8WFD2 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC15.73■□□□□ 0.11
NPIPA3F8WFD2 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC15.73■□□□□ 0.11
NPIPA3F8WFD2 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
NPIPA3F8WFD2 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
NPIPA3F8WFD2 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC15.73■□□□□ 0.11
NPIPA3F8WFD2 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
NPIPA3F8WFD2 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC15.73■□□□□ 0.11
NPIPA3F8WFD2 REXO1L11P-201ENST00000620964 1927 ntBASIC15.73■□□□□ 0.11
NPIPA3F8WFD2 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
NPIPA3F8WFD2 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
NPIPA3F8WFD2 GRM5-203ENST00000393294 1268 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
NPIPA3F8WFD2 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC15.73■□□□□ 0.11
NPIPA3F8WFD2 S100A2-206ENST00000497140 697 ntTSL 2 BASIC15.73■□□□□ 0.11
NPIPA3F8WFD2 ETFA-208ENST00000559602 792 ntTSL 3 BASIC15.73■□□□□ 0.11
NPIPA3F8WFD2 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
NPIPA3F8WFD2 MXD1-201ENST00000264444 5587 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
NPIPA3F8WFD2 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC15.73■□□□□ 0.11
NPIPA3F8WFD2 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC15.73■□□□□ 0.11
NPIPA3F8WFD2 LINC00304-203ENST00000565008 1864 ntBASIC15.73■□□□□ 0.11
NPIPA3F8WFD2 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
NPIPA3F8WFD2 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC15.73■□□□□ 0.11
NPIPA3F8WFD2 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
NPIPA3F8WFD2 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
NPIPA3F8WFD2 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC15.73■□□□□ 0.11
NPIPA3F8WFD2 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
NPIPA3F8WFD2 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
NPIPA3F8WFD2 KDM6A-212ENST00000543216 5655 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
NPIPA3F8WFD2 XPO5-201ENST00000265351 5364 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
NPIPA3F8WFD2 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC15.72■□□□□ 0.11
NPIPA3F8WFD2 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
NPIPA3F8WFD2 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
NPIPA3F8WFD2 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
NPIPA3F8WFD2 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC15.72■□□□□ 0.11
NPIPA3F8WFD2 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC15.72■□□□□ 0.11
NPIPA3F8WFD2 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC15.72■□□□□ 0.11
NPIPA3F8WFD2 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC15.72■□□□□ 0.11
NPIPA3F8WFD2 AC005332.8-201ENST00000622750 2735 ntBASIC15.72■□□□□ 0.11
NPIPA3F8WFD2 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC15.72■□□□□ 0.11
NPIPA3F8WFD2 NCF1C-201ENST00000438382 1427 ntBASIC15.72■□□□□ 0.11
NPIPA3F8WFD2 BEX3-201ENST00000361298 921 ntTSL 2 BASIC15.72■□□□□ 0.11
NPIPA3F8WFD2 CRCP-205ENST00000431089 942 ntTSL 2 BASIC15.72■□□□□ 0.11
NPIPA3F8WFD2 AC097532.1-201ENST00000440802 322 ntTSL 2 BASIC15.72■□□□□ 0.11
NPIPA3F8WFD2 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC15.72■□□□□ 0.11
NPIPA3F8WFD2 CR559946.1-201ENST00000453835 531 ntTSL 4 BASIC15.72■□□□□ 0.11
NPIPA3F8WFD2 AC108751.1-201ENST00000490852 363 ntBASIC15.72■□□□□ 0.11
NPIPA3F8WFD2 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC15.72■□□□□ 0.11
NPIPA3F8WFD2 LDLRAD2-203ENST00000543870 1180 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
NPIPA3F8WFD2 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC15.72■□□□□ 0.11
NPIPA3F8WFD2 AC004706.3-202ENST00000621574 984 ntBASIC15.72■□□□□ 0.11
NPIPA3F8WFD2 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC15.72■□□□□ 0.11
NPIPA3F8WFD2 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
NPIPA3F8WFD2 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC15.72■□□□□ 0.11
NPIPA3F8WFD2 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC15.72■□□□□ 0.11
NPIPA3F8WFD2 ATXN2-201ENST00000377617 4702 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
NPIPA3F8WFD2 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
NPIPA3F8WFD2 PRX-202ENST00000324001 4855 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
NPIPA3F8WFD2 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC15.72■□□□□ 0.11
NPIPA3F8WFD2 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
NPIPA3F8WFD2 SCRIB-202ENST00000356994 5218 ntAPPRIS P4 TSL 2 BASIC15.71■□□□□ 0.11
NPIPA3F8WFD2 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
NPIPA3F8WFD2 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
NPIPA3F8WFD2 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
NPIPA3F8WFD2 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
NPIPA3F8WFD2 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
NPIPA3F8WFD2 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
NPIPA3F8WFD2 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
NPIPA3F8WFD2 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
NPIPA3F8WFD2 AC006504.4-201ENST00000592118 1568 ntBASIC15.71■□□□□ 0.11
NPIPA3F8WFD2 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC15.71■□□□□ 0.11
NPIPA3F8WFD2 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC15.71■□□□□ 0.11
NPIPA3F8WFD2 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
NPIPA3F8WFD2 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
NPIPA3F8WFD2 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
NPIPA3F8WFD2 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC15.71■□□□□ 0.11
NPIPA3F8WFD2 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC15.71■□□□□ 0.11
NPIPA3F8WFD2 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.11
NPIPA3F8WFD2 VSTM1-201ENST00000338372 1023 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
NPIPA3F8WFD2 ELK2BP-201ENST00000415014 1224 ntBASIC15.71■□□□□ 0.11
NPIPA3F8WFD2 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC15.71■□□□□ 0.11
NPIPA3F8WFD2 AC002558.1-201ENST00000488906 803 ntBASIC15.71■□□□□ 0.11
NPIPA3F8WFD2 TPD52L1-211ENST00000532429 1022 ntTSL 2 BASIC15.71■□□□□ 0.11
NPIPA3F8WFD2 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.11
NPIPA3F8WFD2 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC15.71■□□□□ 0.11
NPIPA3F8WFD2 SLC25A3P1-206ENST00000569142 925 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
NPIPA3F8WFD2 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC15.71■□□□□ 0.11
NPIPA3F8WFD2 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC15.71■□□□□ 0.11
NPIPA3F8WFD2 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC15.71■□□□□ 0.11
NPIPA3F8WFD2 AL139424.1-201ENST00000607572 797 ntBASIC15.71■□□□□ 0.11
NPIPA3F8WFD2 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
NPIPA3F8WFD2 SCAF8-201ENST00000367178 5057 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.11
NPIPA3F8WFD2 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
NPIPA3F8WFD2 AP3D1-201ENST00000345016 4870 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
NPIPA3F8WFD2 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
NPIPA3F8WFD2 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
NPIPA3F8WFD2 CACNA1G-202ENST00000354983 8138 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.1
NPIPA3F8WFD2 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 50.4 ms