Protein–RNA interactions for Protein: A6NKF7

TMEM88B, Transmembrane protein 88B, humanhuman

Predictions only

Length 163 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM88BA6NKF7 AKIP1-202ENST00000309357 1232 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
TMEM88BA6NKF7 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC19.8■□□□□ 0.76
TMEM88BA6NKF7 IGLV2-23-201ENST00000390306 502 ntAPPRIS P1 BASIC19.8■□□□□ 0.76
TMEM88BA6NKF7 MIR1908-201ENST00000410394 80 ntBASIC19.8■□□□□ 0.76
TMEM88BA6NKF7 RASL12-203ENST00000434605 982 ntTSL 2 BASIC19.8■□□□□ 0.76
TMEM88BA6NKF7 LINC01605-204ENST00000522718 1093 ntTSL 3 BASIC19.8■□□□□ 0.76
TMEM88BA6NKF7 AC111170.2-201ENST00000585369 768 ntTSL 3 BASIC19.8■□□□□ 0.76
TMEM88BA6NKF7 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC19.8■□□□□ 0.76
TMEM88BA6NKF7 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC19.8■□□□□ 0.76
TMEM88BA6NKF7 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
TMEM88BA6NKF7 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC19.8■□□□□ 0.76
TMEM88BA6NKF7 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC19.8■□□□□ 0.76
TMEM88BA6NKF7 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC19.79■□□□□ 0.76
TMEM88BA6NKF7 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC19.79■□□□□ 0.76
TMEM88BA6NKF7 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
TMEM88BA6NKF7 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
TMEM88BA6NKF7 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
TMEM88BA6NKF7 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC19.79■□□□□ 0.76
TMEM88BA6NKF7 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
TMEM88BA6NKF7 OSTF1-201ENST00000346234 1319 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
TMEM88BA6NKF7 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC19.79■□□□□ 0.76
TMEM88BA6NKF7 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
TMEM88BA6NKF7 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC19.79■□□□□ 0.76
TMEM88BA6NKF7 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
TMEM88BA6NKF7 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
TMEM88BA6NKF7 HNRNPRP1-201ENST00000453465 1695 ntBASIC19.79■□□□□ 0.76
TMEM88BA6NKF7 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
TMEM88BA6NKF7 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC19.79■□□□□ 0.76
TMEM88BA6NKF7 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC19.79■□□□□ 0.76
TMEM88BA6NKF7 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
TMEM88BA6NKF7 SCAND1-201ENST00000305978 902 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
TMEM88BA6NKF7 DDT-201ENST00000350608 671 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
TMEM88BA6NKF7 TRIM74-202ENST00000395244 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
TMEM88BA6NKF7 MIOX-203ENST00000395733 1021 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
TMEM88BA6NKF7 TPSD1-202ENST00000397534 896 ntAPPRIS ALT2 TSL 5 BASIC19.79■□□□□ 0.76
TMEM88BA6NKF7 BOLA2P3-201ENST00000404566 256 ntBASIC19.79■□□□□ 0.76
TMEM88BA6NKF7 ECSIT-203ENST00000417981 970 ntTSL 2 BASIC19.79■□□□□ 0.76
TMEM88BA6NKF7 TRIM73-204ENST00000447409 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
TMEM88BA6NKF7 KLC4-205ENST00000458460 1251 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
TMEM88BA6NKF7 C8orf46-205ENST00000480005 865 ntTSL 2 BASIC19.79■□□□□ 0.76
TMEM88BA6NKF7 AC025442.1-201ENST00000521596 481 ntTSL 2 BASIC19.79■□□□□ 0.76
TMEM88BA6NKF7 FLJ27354-203ENST00000526694 851 ntTSL 2 BASIC19.79■□□□□ 0.76
TMEM88BA6NKF7 AC005833.2-201ENST00000527518 1249 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
TMEM88BA6NKF7 C12orf49-204ENST00000548356 923 ntTSL 2 BASIC19.79■□□□□ 0.76
TMEM88BA6NKF7 RN7SL828P-201ENST00000607615 303 ntBASIC19.79■□□□□ 0.76
TMEM88BA6NKF7 AC004790.1-201ENST00000612686 536 ntBASIC19.79■□□□□ 0.76
TMEM88BA6NKF7 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
TMEM88BA6NKF7 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
TMEM88BA6NKF7 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC19.79■□□□□ 0.76
TMEM88BA6NKF7 CTSB-219ENST00000530640 1389 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
TMEM88BA6NKF7 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC19.79■□□□□ 0.76
TMEM88BA6NKF7 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC19.79■□□□□ 0.76
TMEM88BA6NKF7 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
TMEM88BA6NKF7 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
TMEM88BA6NKF7 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
TMEM88BA6NKF7 AKR7L-202ENST00000429712 1313 ntAPPRIS P5 TSL 1 (best) BASIC19.78■□□□□ 0.76
TMEM88BA6NKF7 KLK8-211ENST00000600767 1324 ntAPPRIS P1 TSL 2 BASIC19.78■□□□□ 0.76
TMEM88BA6NKF7 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
TMEM88BA6NKF7 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC19.78■□□□□ 0.76
TMEM88BA6NKF7 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
TMEM88BA6NKF7 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC19.78■□□□□ 0.76
TMEM88BA6NKF7 BANF1-201ENST00000312175 1155 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
TMEM88BA6NKF7 RHCE-206ENST00000413854 1198 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
TMEM88BA6NKF7 AC105940.2-201ENST00000421055 380 ntTSL 3 BASIC19.78■□□□□ 0.76
TMEM88BA6NKF7 AC007389.4-201ENST00000454674 793 ntBASIC19.78■□□□□ 0.76
TMEM88BA6NKF7 MFF-223ENST00000524634 647 ntTSL 2 BASIC19.78■□□□□ 0.76
TMEM88BA6NKF7 AC055876.2-201ENST00000531834 546 ntBASIC19.78■□□□□ 0.76
TMEM88BA6NKF7 AL928654.4-206ENST00000551180 980 ntAPPRIS ALT2 TSL 5 BASIC19.78■□□□□ 0.76
TMEM88BA6NKF7 LINC00473-203ENST00000581850 929 ntTSL 3 BASIC19.78■□□□□ 0.76
TMEM88BA6NKF7 AC004477.1-202ENST00000584428 539 ntTSL 2 BASIC19.78■□□□□ 0.76
TMEM88BA6NKF7 C17orf62-239ENST00000585080 741 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
TMEM88BA6NKF7 DM1-AS-201ENST00000586251 483 ntTSL 2 BASIC19.78■□□□□ 0.76
TMEM88BA6NKF7 AC073389.1-201ENST00000595595 795 ntBASIC19.78■□□□□ 0.76
TMEM88BA6NKF7 FAM171B-202ENST00000612606 940 ntTSL 5 BASIC19.78■□□□□ 0.76
TMEM88BA6NKF7 TAMM41-212ENST00000630288 607 ntTSL 2 BASIC19.78■□□□□ 0.76
TMEM88BA6NKF7 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
TMEM88BA6NKF7 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
TMEM88BA6NKF7 FBXO15-201ENST00000419743 1708 ntAPPRIS P2 TSL 2 BASIC19.78■□□□□ 0.76
TMEM88BA6NKF7 BCL2L12-203ENST00000441864 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
TMEM88BA6NKF7 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC19.78■□□□□ 0.76
TMEM88BA6NKF7 LINC00221-202ENST00000619530 1499 ntTSL 2 BASIC19.78■□□□□ 0.76
TMEM88BA6NKF7 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
TMEM88BA6NKF7 PAQR6-214ENST00000613336 1599 ntTSL 3 BASIC19.78■□□□□ 0.76
TMEM88BA6NKF7 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
TMEM88BA6NKF7 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
TMEM88BA6NKF7 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
TMEM88BA6NKF7 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC19.77■□□□□ 0.76
TMEM88BA6NKF7 PLEKHA2-208ENST00000616927 1748 ntTSL 5 BASIC19.77■□□□□ 0.76
TMEM88BA6NKF7 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC19.77■□□□□ 0.76
TMEM88BA6NKF7 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC19.77■□□□□ 0.76
TMEM88BA6NKF7 EEF1B2-201ENST00000236957 844 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
TMEM88BA6NKF7 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
TMEM88BA6NKF7 AP000317.2-201ENST00000362077 641 ntTSL 3 BASIC19.77■□□□□ 0.76
TMEM88BA6NKF7 ING1-204ENST00000375775 1074 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
TMEM88BA6NKF7 HLA-H-201ENST00000383620 1096 ntBASIC19.77■□□□□ 0.76
TMEM88BA6NKF7 NDUFA3-204ENST00000391764 267 ntTSL 3 BASIC19.77■□□□□ 0.76
TMEM88BA6NKF7 PSORS1C3-201ENST00000412143 593 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
TMEM88BA6NKF7 AL451069.2-201ENST00000428814 297 ntTSL 3 BASIC19.77■□□□□ 0.76
TMEM88BA6NKF7 PPP1R14B-203ENST00000542235 920 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
TMEM88BA6NKF7 AC005342.2-201ENST00000544163 315 ntTSL 3 BASIC19.77■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 72.3 ms