Protein–RNA interactions for Protein: A3KN83

SBNO1, Protein strawberry notch homolog 1, humanhuman

Predictions only

Length 1,393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SBNO1A3KN83 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC23.14■■□□□ 1.29
SBNO1A3KN83 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC23.14■■□□□ 1.29
SBNO1A3KN83 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC23.14■■□□□ 1.29
SBNO1A3KN83 CRIP1-203ENST00000409393 677 ntAPPRIS P1 TSL 3 BASIC23.14■■□□□ 1.29
SBNO1A3KN83 HLA-V-201ENST00000429037 534 ntBASIC23.14■■□□□ 1.29
SBNO1A3KN83 IL32-206ENST00000440815 920 ntAPPRIS P4 TSL 2 BASIC23.14■■□□□ 1.29
SBNO1A3KN83 IL32-207ENST00000444393 892 ntAPPRIS P4 TSL 2 BASIC23.14■■□□□ 1.29
SBNO1A3KN83 AC022201.2-201ENST00000445084 287 ntTSL 5 BASIC23.14■■□□□ 1.29
SBNO1A3KN83 RN7SL692P-201ENST00000464677 288 ntBASIC23.14■■□□□ 1.29
SBNO1A3KN83 PTPRVP-202ENST00000490575 953 ntTSL 5 BASIC23.14■■□□□ 1.29
SBNO1A3KN83 AC106872.10-201ENST00000503778 747 ntTSL 3 BASIC23.14■■□□□ 1.29
SBNO1A3KN83 LEPROTL1-204ENST00000518192 847 ntTSL 3 BASIC23.14■■□□□ 1.29
SBNO1A3KN83 AL139349.1-201ENST00000530479 577 ntTSL 4 BASIC23.14■■□□□ 1.29
SBNO1A3KN83 IL32-219ENST00000531965 746 ntAPPRIS ALT2 TSL 1 (best) BASIC23.14■■□□□ 1.29
SBNO1A3KN83 IL32-226ENST00000548476 1014 ntAPPRIS ALT2 TSL 2 BASIC23.14■■□□□ 1.29
SBNO1A3KN83 CCDC85C-204ENST00000555822 930 ntTSL 5 BASIC23.14■■□□□ 1.29
SBNO1A3KN83 SNHG15-207ENST00000582727 1039 ntTSL 2 BASIC23.14■■□□□ 1.29
SBNO1A3KN83 AC027307.2-201ENST00000591252 911 ntBASIC23.14■■□□□ 1.29
SBNO1A3KN83 AL359881.2-201ENST00000602973 570 ntBASIC23.14■■□□□ 1.29
SBNO1A3KN83 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC23.14■■□□□ 1.29
SBNO1A3KN83 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC23.13■■□□□ 1.29
SBNO1A3KN83 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC23.13■■□□□ 1.29
SBNO1A3KN83 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC23.13■■□□□ 1.29
SBNO1A3KN83 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC23.13■■□□□ 1.29
SBNO1A3KN83 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
SBNO1A3KN83 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
SBNO1A3KN83 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC23.13■■□□□ 1.29
SBNO1A3KN83 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC23.13■■□□□ 1.29
SBNO1A3KN83 AC100757.3-201ENST00000622361 1406 ntBASIC23.13■■□□□ 1.29
SBNO1A3KN83 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
SBNO1A3KN83 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC23.13■■□□□ 1.29
SBNO1A3KN83 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC23.13■■□□□ 1.29
SBNO1A3KN83 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC23.13■■□□□ 1.29
SBNO1A3KN83 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC23.13■■□□□ 1.29
SBNO1A3KN83 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
SBNO1A3KN83 COX6A1-201ENST00000229379 572 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
SBNO1A3KN83 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
SBNO1A3KN83 VCX2-201ENST00000317103 815 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
SBNO1A3KN83 RNU1-129P-201ENST00000384064 167 ntBASIC23.13■■□□□ 1.29
SBNO1A3KN83 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC23.13■■□□□ 1.29
SBNO1A3KN83 ATG10-207ENST00000513443 978 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
SBNO1A3KN83 MUTYH-237ENST00000531105 501 ntTSL 5 BASIC23.13■■□□□ 1.29
SBNO1A3KN83 TMEM63A-209ENST00000537914 1018 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
SBNO1A3KN83 TUBB3-203ENST00000553967 736 ntTSL 2 BASIC23.13■■□□□ 1.29
SBNO1A3KN83 U1.21-201ENST00000580816 167 ntBASIC23.13■■□□□ 1.29
SBNO1A3KN83 KF456478.1-201ENST00000585980 472 ntTSL 3 BASIC23.13■■□□□ 1.29
SBNO1A3KN83 GTF2IRD2-205ENST00000614386 578 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
SBNO1A3KN83 VCX-203ENST00000620630 812 ntAPPRIS ALT2 TSL 5 BASIC23.13■■□□□ 1.29
SBNO1A3KN83 AC073592.8-201ENST00000624126 511 ntBASIC23.13■■□□□ 1.29
SBNO1A3KN83 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC23.13■■□□□ 1.29
SBNO1A3KN83 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC23.12■■□□□ 1.29
SBNO1A3KN83 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC23.12■■□□□ 1.29
SBNO1A3KN83 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
SBNO1A3KN83 AL353732.1-201ENST00000569618 1459 ntBASIC23.12■■□□□ 1.29
SBNO1A3KN83 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC23.12■■□□□ 1.29
SBNO1A3KN83 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC23.12■■□□□ 1.29
SBNO1A3KN83 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
SBNO1A3KN83 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC23.12■■□□□ 1.29
SBNO1A3KN83 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC23.12■■□□□ 1.29
SBNO1A3KN83 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
SBNO1A3KN83 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
SBNO1A3KN83 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC23.12■■□□□ 1.29
SBNO1A3KN83 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
SBNO1A3KN83 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
SBNO1A3KN83 ZSCAN2-203ENST00000334141 993 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
SBNO1A3KN83 MB-201ENST00000359787 1170 ntAPPRIS P1 TSL 2 BASIC23.12■■□□□ 1.29
SBNO1A3KN83 SSR4-204ENST00000370087 745 ntAPPRIS P1 TSL 3 BASIC23.12■■□□□ 1.29
SBNO1A3KN83 MB-202ENST00000397326 1197 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
SBNO1A3KN83 MB-203ENST00000397328 1153 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
SBNO1A3KN83 HCG4-201ENST00000418983 998 ntBASIC23.12■■□□□ 1.29
SBNO1A3KN83 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC23.12■■□□□ 1.29
SBNO1A3KN83 MIR4453-201ENST00000584019 89 ntBASIC23.12■■□□□ 1.29
SBNO1A3KN83 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
SBNO1A3KN83 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC23.12■■□□□ 1.29
SBNO1A3KN83 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
SBNO1A3KN83 AL354751.1-201ENST00000412768 1863 ntBASIC23.12■■□□□ 1.29
SBNO1A3KN83 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
SBNO1A3KN83 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
SBNO1A3KN83 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC23.11■■□□□ 1.29
SBNO1A3KN83 IQCE-210ENST00000438376 2170 ntAPPRIS ALT2 TSL 5 BASIC23.11■■□□□ 1.29
SBNO1A3KN83 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC23.11■■□□□ 1.29
SBNO1A3KN83 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC23.11■■□□□ 1.29
SBNO1A3KN83 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC23.11■■□□□ 1.29
SBNO1A3KN83 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC23.11■■□□□ 1.29
SBNO1A3KN83 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
SBNO1A3KN83 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC23.11■■□□□ 1.29
SBNO1A3KN83 MRPL9-202ENST00000368830 1296 ntAPPRIS P3 TSL 1 (best) BASIC23.11■■□□□ 1.29
SBNO1A3KN83 WFDC3-204ENST00000372632 704 ntTSL 3 BASIC23.11■■□□□ 1.29
SBNO1A3KN83 TEX30-202ENST00000376021 1038 ntTSL 2 BASIC23.11■■□□□ 1.29
SBNO1A3KN83 TMEM91-205ENST00000436170 864 ntTSL 5 BASIC23.11■■□□□ 1.29
SBNO1A3KN83 LINC01983-203ENST00000444346 519 ntTSL 2 BASIC23.11■■□□□ 1.29
SBNO1A3KN83 MTRF1LP2-201ENST00000506027 1122 ntBASIC23.11■■□□□ 1.29
SBNO1A3KN83 AC106772.1-201ENST00000506629 591 ntTSL 3 BASIC23.11■■□□□ 1.29
SBNO1A3KN83 NR2C2AP-204ENST00000538165 891 ntTSL 2 BASIC23.11■■□□□ 1.29
SBNO1A3KN83 AL162231.3-201ENST00000556278 902 ntAPPRIS P1 TSL 5 BASIC23.11■■□□□ 1.29
SBNO1A3KN83 AL132711.1-201ENST00000557546 722 ntTSL 3 BASIC23.11■■□□□ 1.29
SBNO1A3KN83 AL031055.1-201ENST00000606362 631 ntBASIC23.11■■□□□ 1.29
SBNO1A3KN83 MIR6752-201ENST00000618442 71 ntBASIC23.11■■□□□ 1.29
SBNO1A3KN83 AL590560.3-201ENST00000623350 461 ntBASIC23.11■■□□□ 1.29
SBNO1A3KN83 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC23.11■■□□□ 1.29
Retrieved 100 of 98,524 protein–RNA pairs in 20.5 ms