Protein–RNA interactions for Protein: A2PYH4

HFM1, Probable ATP-dependent DNA helicase HFM1, humanhuman

Predictions only

Length 1,435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HFM1A2PYH4 TNNT1-201ENST00000291901 967 ntAPPRIS ALT2 TSL 1 (best) BASIC25.27■■□□□ 1.64
HFM1A2PYH4 MRNIP-201ENST00000292586 1238 ntAPPRIS P4 TSL 1 (best) BASIC25.27■■□□□ 1.64
HFM1A2PYH4 LINC00899-202ENST00000444890 493 ntTSL 3 BASIC25.27■■□□□ 1.64
HFM1A2PYH4 TMEM205-202ENST00000447337 916 ntAPPRIS P1 TSL 2 BASIC25.27■■□□□ 1.64
HFM1A2PYH4 RPS27L-204ENST00000455271 923 ntTSL 1 (best) BASIC25.27■■□□□ 1.64
HFM1A2PYH4 AF131215.3-201ENST00000532453 639 ntTSL 1 (best) BASIC25.27■■□□□ 1.64
HFM1A2PYH4 AP000777.2-201ENST00000539897 501 ntTSL 4 BASIC25.27■■□□□ 1.64
HFM1A2PYH4 MPDU1-223ENST00000582151 728 ntBASIC25.27■■□□□ 1.64
HFM1A2PYH4 MIR4469-201ENST00000583919 79 ntBASIC25.27■■□□□ 1.64
HFM1A2PYH4 GPR42-202ENST00000597214 1182 ntAPPRIS P1 BASIC25.27■■□□□ 1.64
HFM1A2PYH4 FANCA-203ENST00000389302 1641 ntTSL 1 (best) BASIC25.27■■□□□ 1.64
HFM1A2PYH4 SEPT6-209ENST00000489216 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC25.27■■□□□ 1.64
HFM1A2PYH4 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC25.27■■□□□ 1.64
HFM1A2PYH4 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC25.27■■□□□ 1.64
HFM1A2PYH4 COQ10A-202ENST00000433805 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC25.27■■□□□ 1.64
HFM1A2PYH4 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC25.27■■□□□ 1.64
HFM1A2PYH4 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC25.26■■□□□ 1.63
HFM1A2PYH4 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC25.26■■□□□ 1.63
HFM1A2PYH4 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
HFM1A2PYH4 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC25.26■■□□□ 1.63
HFM1A2PYH4 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC25.26■■□□□ 1.63
HFM1A2PYH4 RPS17-201ENST00000330244 592 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
HFM1A2PYH4 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC25.26■■□□□ 1.63
HFM1A2PYH4 TCEAL3-203ENST00000372628 1221 ntAPPRIS P1 TSL 5 BASIC25.26■■□□□ 1.63
HFM1A2PYH4 AC005020.2-201ENST00000455905 830 ntAPPRIS P1 TSL 3 BASIC25.26■■□□□ 1.63
HFM1A2PYH4 HELT-204ENST00000515777 841 ntAPPRIS P4 TSL 1 (best) BASIC25.26■■□□□ 1.63
HFM1A2PYH4 SMCO4-204ENST00000527149 472 ntAPPRIS P1 TSL 5 BASIC25.26■■□□□ 1.63
HFM1A2PYH4 TVP23A-210ENST00000612195 1298 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
HFM1A2PYH4 AC134684.3-201ENST00000641758 218 ntBASIC25.26■■□□□ 1.63
HFM1A2PYH4 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
HFM1A2PYH4 TEX264-202ENST00000395057 1555 ntAPPRIS P3 TSL 1 (best) BASIC25.26■■□□□ 1.63
HFM1A2PYH4 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
HFM1A2PYH4 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC25.25■■□□□ 1.63
HFM1A2PYH4 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC25.25■■□□□ 1.63
HFM1A2PYH4 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC25.25■■□□□ 1.63
HFM1A2PYH4 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC25.25■■□□□ 1.63
HFM1A2PYH4 SFN-201ENST00000339276 1320 ntAPPRIS P1 BASIC25.25■■□□□ 1.63
HFM1A2PYH4 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC25.25■■□□□ 1.63
HFM1A2PYH4 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC25.25■■□□□ 1.63
HFM1A2PYH4 AC013270.1-201ENST00000425578 440 ntTSL 2 BASIC25.25■■□□□ 1.63
HFM1A2PYH4 AC060834.1-201ENST00000443027 2032 ntBASIC25.25■■□□□ 1.63
HFM1A2PYH4 AC109635.5-201ENST00000533593 962 ntBASIC25.25■■□□□ 1.63
HFM1A2PYH4 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC25.25■■□□□ 1.63
HFM1A2PYH4 IGHV3OR16-6-201ENST00000568775 360 ntBASIC25.25■■□□□ 1.63
HFM1A2PYH4 AC005829.1-201ENST00000570002 483 ntBASIC25.25■■□□□ 1.63
HFM1A2PYH4 PYCR1-207ENST00000577756 1144 ntTSL 2 BASIC25.25■■□□□ 1.63
HFM1A2PYH4 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC25.25■■□□□ 1.63
HFM1A2PYH4 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC25.25■■□□□ 1.63
HFM1A2PYH4 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC25.25■■□□□ 1.63
HFM1A2PYH4 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC25.25■■□□□ 1.63
HFM1A2PYH4 TUBB8P12-201ENST00000308911 1335 ntBASIC25.24■■□□□ 1.63
HFM1A2PYH4 TUBB7P-202ENST00000428444 1305 ntBASIC25.24■■□□□ 1.63
HFM1A2PYH4 REM2-202ENST00000536884 1331 ntTSL 2 BASIC25.24■■□□□ 1.63
HFM1A2PYH4 TUBB8P7-204ENST00000567960 1332 ntBASIC25.24■■□□□ 1.63
HFM1A2PYH4 ADAMTSL1-202ENST00000327883 1864 ntTSL 1 (best) BASIC25.24■■□□□ 1.63
HFM1A2PYH4 ABHD3-209ENST00000580981 1836 ntTSL 5 BASIC25.24■■□□□ 1.63
HFM1A2PYH4 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
HFM1A2PYH4 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC25.24■■□□□ 1.63
HFM1A2PYH4 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC25.24■■□□□ 1.63
HFM1A2PYH4 STOM-202ENST00000347359 870 ntTSL 2 BASIC25.24■■□□□ 1.63
HFM1A2PYH4 FCN1-201ENST00000371806 1286 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
HFM1A2PYH4 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC25.24■■□□□ 1.63
HFM1A2PYH4 TEX30-206ENST00000376032 1165 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
HFM1A2PYH4 AMACR-204ENST00000382085 1195 ntTSL 1 (best) BASIC25.24■■□□□ 1.63
HFM1A2PYH4 RNU1-129P-201ENST00000384064 167 ntBASIC25.24■■□□□ 1.63
HFM1A2PYH4 YWHAZ-203ENST00000395951 964 ntAPPRIS P1 TSL 2 BASIC25.24■■□□□ 1.63
HFM1A2PYH4 U1.21-201ENST00000580816 167 ntBASIC25.24■■□□□ 1.63
HFM1A2PYH4 AC010624.2-201ENST00000600998 575 ntTSL 5 BASIC25.24■■□□□ 1.63
HFM1A2PYH4 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC25.24■■□□□ 1.63
HFM1A2PYH4 AL021920.2-201ENST00000624828 1351 ntBASIC25.24■■□□□ 1.63
HFM1A2PYH4 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
HFM1A2PYH4 TTLL10-201ENST00000379288 2114 ntTSL 1 (best) BASIC25.24■■□□□ 1.63
HFM1A2PYH4 MYC-202ENST00000377970 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC25.24■■□□□ 1.63
HFM1A2PYH4 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC25.24■■□□□ 1.63
HFM1A2PYH4 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
HFM1A2PYH4 SLC38A6-202ENST00000354886 1730 ntTSL 1 (best) BASIC25.24■■□□□ 1.63
HFM1A2PYH4 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC25.24■■□□□ 1.63
HFM1A2PYH4 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC25.24■■□□□ 1.63
HFM1A2PYH4 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
HFM1A2PYH4 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC25.24■■□□□ 1.63
HFM1A2PYH4 GPR149-201ENST00000389740 2323 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
HFM1A2PYH4 KCTD14-201ENST00000353172 1691 ntAPPRIS P3 TSL 1 (best) BASIC25.23■■□□□ 1.63
HFM1A2PYH4 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC25.23■■□□□ 1.63
HFM1A2PYH4 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC25.23■■□□□ 1.63
HFM1A2PYH4 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC25.23■■□□□ 1.63
HFM1A2PYH4 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
HFM1A2PYH4 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
HFM1A2PYH4 AL355306.1-201ENST00000415580 579 ntBASIC25.23■■□□□ 1.63
HFM1A2PYH4 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC25.23■■□□□ 1.63
HFM1A2PYH4 PTHLH-207ENST00000539239 890 ntAPPRIS ALT1 TSL 5 BASIC25.23■■□□□ 1.63
HFM1A2PYH4 AC013565.3-202ENST00000570120 460 ntTSL 2 BASIC25.23■■□□□ 1.63
HFM1A2PYH4 MIR3687-2-201ENST00000577708 61 ntBASIC25.23■■□□□ 1.63
HFM1A2PYH4 AC008761.1-201ENST00000595363 217 ntTSL 5 BASIC25.23■■□□□ 1.63
HFM1A2PYH4 AL355385.1-201ENST00000606123 409 ntBASIC25.23■■□□□ 1.63
HFM1A2PYH4 MIR3687-1-201ENST00000614492 61 ntBASIC25.23■■□□□ 1.63
HFM1A2PYH4 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC25.23■■□□□ 1.63
HFM1A2PYH4 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC25.23■■□□□ 1.63
HFM1A2PYH4 AC131009.4-201ENST00000624048 1740 ntBASIC25.23■■□□□ 1.63
HFM1A2PYH4 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC25.23■■□□□ 1.63
HFM1A2PYH4 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC25.23■■□□□ 1.63
Retrieved 100 of 98,524 protein–RNA pairs in 41.2 ms