Protein–RNA interactions for Protein: A0A5B6

TCRBV3S1, T-cell receptor beta variable 28 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV3S1A0A5B6 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC16.16■□□□□ 0.18
TCRBV3S1A0A5B6 NPL-204ENST00000367554 3027 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
TCRBV3S1A0A5B6 AC025165.1-201ENST00000356672 2355 ntTSL 5 BASIC16.16■□□□□ 0.18
TCRBV3S1A0A5B6 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
TCRBV3S1A0A5B6 HYAL3-205ENST00000450982 1402 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
TCRBV3S1A0A5B6 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC16.16■□□□□ 0.18
TCRBV3S1A0A5B6 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC16.16■□□□□ 0.18
TCRBV3S1A0A5B6 APOPT1-201ENST00000409074 2523 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
TCRBV3S1A0A5B6 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
TCRBV3S1A0A5B6 APH1A-204ENST00000414276 1718 ntTSL 2 BASIC16.16■□□□□ 0.18
TCRBV3S1A0A5B6 OAZ2-207ENST00000560258 1744 ntTSL 5 BASIC16.16■□□□□ 0.18
TCRBV3S1A0A5B6 TRIM27-202ENST00000377199 2967 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
TCRBV3S1A0A5B6 PYCR1-201ENST00000329875 1855 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
TCRBV3S1A0A5B6 ITGB2-207ENST00000397854 2592 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
TCRBV3S1A0A5B6 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
TCRBV3S1A0A5B6 MAPKAP1-206ENST00000373511 3252 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
TCRBV3S1A0A5B6 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
TCRBV3S1A0A5B6 CKMT2-202ENST00000424301 1637 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
TCRBV3S1A0A5B6 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC16.16■□□□□ 0.18
TCRBV3S1A0A5B6 GBA2-202ENST00000378094 3757 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
TCRBV3S1A0A5B6 HYAL1-201ENST00000266031 2517 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
TCRBV3S1A0A5B6 ZNF418-208ENST00000599852 2501 ntTSL 2 BASIC16.15■□□□□ 0.18
TCRBV3S1A0A5B6 JRK-203ENST00000571961 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
TCRBV3S1A0A5B6 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
TCRBV3S1A0A5B6 HSPB7-204ENST00000411503 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC16.15■□□□□ 0.18
TCRBV3S1A0A5B6 SIGLEC10-201ENST00000339313 2256 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
TCRBV3S1A0A5B6 DDX5-201ENST00000225792 2554 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
TCRBV3S1A0A5B6 DHX30-205ENST00000445061 4065 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
TCRBV3S1A0A5B6 STAC-201ENST00000273183 3227 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
TCRBV3S1A0A5B6 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
TCRBV3S1A0A5B6 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
TCRBV3S1A0A5B6 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
TCRBV3S1A0A5B6 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC16.15■□□□□ 0.18
TCRBV3S1A0A5B6 IGHV3-52-201ENST00000519770 353 ntBASIC16.15■□□□□ 0.18
TCRBV3S1A0A5B6 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC16.15■□□□□ 0.18
TCRBV3S1A0A5B6 AP000525.1-201ENST00000608286 694 ntBASIC16.15■□□□□ 0.18
TCRBV3S1A0A5B6 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC16.15■□□□□ 0.18
TCRBV3S1A0A5B6 RELT-201ENST00000064780 3535 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
TCRBV3S1A0A5B6 DACT1-202ENST00000395153 3734 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
TCRBV3S1A0A5B6 KRT76-201ENST00000332411 2529 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
TCRBV3S1A0A5B6 ANKRD24-202ENST00000318934 3906 ntAPPRIS P2 TSL 5 BASIC16.15■□□□□ 0.18
TCRBV3S1A0A5B6 NAF1-201ENST00000274054 1907 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
TCRBV3S1A0A5B6 MGME1-202ENST00000377709 1936 ntTSL 2 BASIC16.15■□□□□ 0.18
TCRBV3S1A0A5B6 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC16.15■□□□□ 0.18
TCRBV3S1A0A5B6 SIGLEC7-201ENST00000305628 1469 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
TCRBV3S1A0A5B6 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
TCRBV3S1A0A5B6 GCLC-213ENST00000616923 3694 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
TCRBV3S1A0A5B6 CALU-205ENST00000535011 3210 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
TCRBV3S1A0A5B6 SEPT5-204ENST00000406395 1974 ntTSL 5 BASIC16.15■□□□□ 0.18
TCRBV3S1A0A5B6 SYNRG-222ENST00000614941 3406 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
TCRBV3S1A0A5B6 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.18
TCRBV3S1A0A5B6 MAPKAP1-202ENST00000350766 3256 ntTSL 1 (best) BASIC16.14■□□□□ 0.18
TCRBV3S1A0A5B6 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
TCRBV3S1A0A5B6 PPAN-P2RY11-202ENST00000428358 2661 ntTSL 2 BASIC16.14■□□□□ 0.17
TCRBV3S1A0A5B6 ARHGAP6-202ENST00000337414 5117 ntAPPRIS P4 TSL 1 (best) BASIC16.14■□□□□ 0.17
TCRBV3S1A0A5B6 ADAMTSL1-202ENST00000327883 1864 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
TCRBV3S1A0A5B6 CLEC18B-201ENST00000339953 1865 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
TCRBV3S1A0A5B6 CLEC18C-202ENST00000536907 1865 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
TCRBV3S1A0A5B6 ELF2-201ENST00000358635 3036 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
TCRBV3S1A0A5B6 TAF1B-201ENST00000263663 2387 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
TCRBV3S1A0A5B6 AC126177.1-201ENST00000547829 2218 ntBASIC16.14■□□□□ 0.17
TCRBV3S1A0A5B6 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
TCRBV3S1A0A5B6 LYAR-201ENST00000343470 1569 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
TCRBV3S1A0A5B6 EVPLL-201ENST00000399134 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
TCRBV3S1A0A5B6 AP1AR-201ENST00000274000 2902 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
TCRBV3S1A0A5B6 PTK7-202ENST00000230419 4272 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
TCRBV3S1A0A5B6 RGS7-203ENST00000366564 2295 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
TCRBV3S1A0A5B6 POU4F2-201ENST00000281321 3144 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
TCRBV3S1A0A5B6 EIF2B4-212ENST00000622434 1771 ntTSL 5 BASIC16.14■□□□□ 0.17
TCRBV3S1A0A5B6 SPATA20-202ENST00000356488 2634 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
TCRBV3S1A0A5B6 ELANE-201ENST00000263621 920 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
TCRBV3S1A0A5B6 DGUOK-201ENST00000264093 1144 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
TCRBV3S1A0A5B6 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
TCRBV3S1A0A5B6 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
TCRBV3S1A0A5B6 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC16.14■□□□□ 0.17
TCRBV3S1A0A5B6 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
TCRBV3S1A0A5B6 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
TCRBV3S1A0A5B6 DGUOK-202ENST00000348222 880 ntTSL 2 BASIC16.14■□□□□ 0.17
TCRBV3S1A0A5B6 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
TCRBV3S1A0A5B6 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC16.14■□□□□ 0.17
TCRBV3S1A0A5B6 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC16.14■□□□□ 0.17
TCRBV3S1A0A5B6 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC16.14■□□□□ 0.17
TCRBV3S1A0A5B6 AC068472.1-201ENST00000474589 881 ntBASIC16.14■□□□□ 0.17
TCRBV3S1A0A5B6 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC16.14■□□□□ 0.17
TCRBV3S1A0A5B6 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC16.14■□□□□ 0.17
TCRBV3S1A0A5B6 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC16.14■□□□□ 0.17
TCRBV3S1A0A5B6 IRX5-204ENST00000560154 879 ntTSL 5 BASIC16.14■□□□□ 0.17
TCRBV3S1A0A5B6 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC16.14■□□□□ 0.17
TCRBV3S1A0A5B6 AC109462.3-201ENST00000573934 613 ntBASIC16.14■□□□□ 0.17
TCRBV3S1A0A5B6 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC16.14■□□□□ 0.17
TCRBV3S1A0A5B6 TBC1D3D-201ENST00000616101 2116 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
TCRBV3S1A0A5B6 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
TCRBV3S1A0A5B6 TBC1D3K-201ENST00000620247 2116 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
TCRBV3S1A0A5B6 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC16.14■□□□□ 0.17
TCRBV3S1A0A5B6 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
TCRBV3S1A0A5B6 DGUOK-208ENST00000629438 1029 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
TCRBV3S1A0A5B6 TSSC2-204ENST00000529482 2337 ntTSL 2 BASIC16.14■□□□□ 0.17
TCRBV3S1A0A5B6 RFWD2-204ENST00000367669 3033 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
TCRBV3S1A0A5B6 JPH2-202ENST00000372980 4787 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
TCRBV3S1A0A5B6 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 81.3 ms