Protein–RNA interactions for Protein: A0A1B0GUT2

LINC00959, HCG1648656, isoform CRA_a, humanhuman

Predictions only

Length 108 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00959A0A1B0GUT2 HMGXB3-202ENST00000503427 5275 ntAPPRIS ALT2 TSL 5 BASIC11.79□□□□□ -0.52
LINC00959A0A1B0GUT2 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
LINC00959A0A1B0GUT2 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
LINC00959A0A1B0GUT2 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
LINC00959A0A1B0GUT2 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
LINC00959A0A1B0GUT2 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
LINC00959A0A1B0GUT2 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
LINC00959A0A1B0GUT2 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
LINC00959A0A1B0GUT2 AL645929.1-201ENST00000420084 975 ntBASIC11.79□□□□□ -0.52
LINC00959A0A1B0GUT2 TSPY22P-201ENST00000427496 604 ntBASIC11.79□□□□□ -0.52
LINC00959A0A1B0GUT2 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC11.79□□□□□ -0.52
LINC00959A0A1B0GUT2 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC11.79□□□□□ -0.52
LINC00959A0A1B0GUT2 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC11.79□□□□□ -0.52
LINC00959A0A1B0GUT2 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC11.79□□□□□ -0.52
LINC00959A0A1B0GUT2 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC11.79□□□□□ -0.52
LINC00959A0A1B0GUT2 AC124947.2-201ENST00000547118 1133 ntBASIC11.79□□□□□ -0.52
LINC00959A0A1B0GUT2 AC011840.4-201ENST00000578471 627 ntBASIC11.79□□□□□ -0.52
LINC00959A0A1B0GUT2 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC11.79□□□□□ -0.52
LINC00959A0A1B0GUT2 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC11.79□□□□□ -0.52
LINC00959A0A1B0GUT2 SHISA6-203ENST00000432116 7518 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
LINC00959A0A1B0GUT2 SLC38A6-202ENST00000354886 1730 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
LINC00959A0A1B0GUT2 SCAF1-201ENST00000360565 4306 ntAPPRIS P2 TSL 2 BASIC11.79□□□□□ -0.52
LINC00959A0A1B0GUT2 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC11.79□□□□□ -0.52
LINC00959A0A1B0GUT2 FAM153A-203ENST00000440605 1966 ntAPPRIS P2 TSL 1 (best) BASIC11.79□□□□□ -0.52
LINC00959A0A1B0GUT2 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
LINC00959A0A1B0GUT2 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
LINC00959A0A1B0GUT2 RHBG-204ENST00000537040 1789 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
LINC00959A0A1B0GUT2 RANBP9-201ENST00000011619 3113 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
LINC00959A0A1B0GUT2 DPEP3-201ENST00000268793 2018 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
LINC00959A0A1B0GUT2 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
LINC00959A0A1B0GUT2 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
LINC00959A0A1B0GUT2 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC11.79□□□□□ -0.52
LINC00959A0A1B0GUT2 HCLS1-202ENST00000428394 1560 ntTSL 2 BASIC11.79□□□□□ -0.52
LINC00959A0A1B0GUT2 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
LINC00959A0A1B0GUT2 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC11.79□□□□□ -0.52
LINC00959A0A1B0GUT2 GUCY1B3-206ENST00000507146 2709 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
LINC00959A0A1B0GUT2 H6PD-201ENST00000377403 9146 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
LINC00959A0A1B0GUT2 WRAP53-203ENST00000431639 1818 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
LINC00959A0A1B0GUT2 WRAP53-204ENST00000457584 1828 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
LINC00959A0A1B0GUT2 ADRB3-201ENST00000345060 2950 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
LINC00959A0A1B0GUT2 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
LINC00959A0A1B0GUT2 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC11.78□□□□□ -0.52
LINC00959A0A1B0GUT2 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC11.78□□□□□ -0.52
LINC00959A0A1B0GUT2 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC11.78□□□□□ -0.52
LINC00959A0A1B0GUT2 BTBD1-201ENST00000261721 3297 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
LINC00959A0A1B0GUT2 LAT2-201ENST00000275635 1869 ntAPPRIS P2 TSL 1 (best) BASIC11.78□□□□□ -0.52
LINC00959A0A1B0GUT2 NFATC1-208ENST00000586434 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
LINC00959A0A1B0GUT2 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC11.78□□□□□ -0.52
LINC00959A0A1B0GUT2 UBALD1-205ENST00000590891 2641 ntBASIC11.78□□□□□ -0.52
LINC00959A0A1B0GUT2 HDAC5-201ENST00000225983 5326 ntAPPRIS P3 TSL 5 BASIC11.78□□□□□ -0.52
LINC00959A0A1B0GUT2 STIM2-203ENST00000467011 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
LINC00959A0A1B0GUT2 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
LINC00959A0A1B0GUT2 GABRB2-202ENST00000353437 1963 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
LINC00959A0A1B0GUT2 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
LINC00959A0A1B0GUT2 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
LINC00959A0A1B0GUT2 FAM220CP-201ENST00000395253 831 ntBASIC11.78□□□□□ -0.52
LINC00959A0A1B0GUT2 SPDYE13P-201ENST00000445314 798 ntBASIC11.78□□□□□ -0.52
LINC00959A0A1B0GUT2 RN7SL606P-201ENST00000472779 293 ntBASIC11.78□□□□□ -0.52
LINC00959A0A1B0GUT2 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC11.78□□□□□ -0.52
LINC00959A0A1B0GUT2 TMEM64-204ENST00000519519 873 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
LINC00959A0A1B0GUT2 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC11.78□□□□□ -0.52
LINC00959A0A1B0GUT2 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
LINC00959A0A1B0GUT2 CD320-202ENST00000537716 1119 ntTSL 2 BASIC11.78□□□□□ -0.52
LINC00959A0A1B0GUT2 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
LINC00959A0A1B0GUT2 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC11.78□□□□□ -0.52
LINC00959A0A1B0GUT2 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
LINC00959A0A1B0GUT2 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC11.78□□□□□ -0.52
LINC00959A0A1B0GUT2 AC090616.6-201ENST00000582640 721 ntBASIC11.78□□□□□ -0.52
LINC00959A0A1B0GUT2 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC11.78□□□□□ -0.52
LINC00959A0A1B0GUT2 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC11.78□□□□□ -0.52
LINC00959A0A1B0GUT2 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC11.78□□□□□ -0.52
LINC00959A0A1B0GUT2 IGHV3-41-201ENST00000613121 348 ntBASIC11.78□□□□□ -0.52
LINC00959A0A1B0GUT2 AC083849.1-201ENST00000615227 514 ntBASIC11.78□□□□□ -0.52
LINC00959A0A1B0GUT2 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC11.78□□□□□ -0.52
LINC00959A0A1B0GUT2 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
LINC00959A0A1B0GUT2 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC11.78□□□□□ -0.52
LINC00959A0A1B0GUT2 AL049757.1-201ENST00000616842 1596 ntBASIC11.78□□□□□ -0.52
LINC00959A0A1B0GUT2 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC11.78□□□□□ -0.52
LINC00959A0A1B0GUT2 YTHDF3-215ENST00000621957 2387 ntAPPRIS ALT1 TSL 5 BASIC11.78□□□□□ -0.52
LINC00959A0A1B0GUT2 RGPD8-201ENST00000302558 5576 ntAPPRIS P2 TSL 1 (best) BASIC11.78□□□□□ -0.52
LINC00959A0A1B0GUT2 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
LINC00959A0A1B0GUT2 MOB3B-201ENST00000262244 6454 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
LINC00959A0A1B0GUT2 AIDA-201ENST00000340020 3008 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
LINC00959A0A1B0GUT2 MLEC-201ENST00000228506 6626 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
LINC00959A0A1B0GUT2 AC069281.2-201ENST00000485071 4401 ntTSL 2 BASIC11.78□□□□□ -0.52
LINC00959A0A1B0GUT2 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
LINC00959A0A1B0GUT2 COL2A1-202ENST00000380518 5071 ntAPPRIS ALT1 TSL 1 (best) BASIC11.78□□□□□ -0.52
LINC00959A0A1B0GUT2 NFATC4-222ENST00000555590 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
LINC00959A0A1B0GUT2 TSC22D1-AS1-201ENST00000616360 2845 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
LINC00959A0A1B0GUT2 ELMO3-203ENST00000477898 2281 ntAPPRIS ALT2 TSL 2 BASIC11.77□□□□□ -0.52
LINC00959A0A1B0GUT2 PLEKHJ1-211ENST00000589097 2251 ntAPPRIS P1 TSL 2 BASIC11.77□□□□□ -0.52
LINC00959A0A1B0GUT2 ACE-204ENST00000428043 5120 ntTSL 2 BASIC11.77□□□□□ -0.52
LINC00959A0A1B0GUT2 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
LINC00959A0A1B0GUT2 MIDN-201ENST00000300952 3790 ntAPPRIS P2 TSL 5 BASIC11.77□□□□□ -0.52
LINC00959A0A1B0GUT2 KAZN-201ENST00000361144 3838 ntTSL 1 (best) BASIC11.77□□□□□ -0.52
LINC00959A0A1B0GUT2 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC11.77□□□□□ -0.52
LINC00959A0A1B0GUT2 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC11.77□□□□□ -0.52
LINC00959A0A1B0GUT2 DRC3-201ENST00000313838 2064 ntAPPRIS P1 TSL 5 BASIC11.77□□□□□ -0.52
LINC00959A0A1B0GUT2 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC11.77□□□□□ -0.52
LINC00959A0A1B0GUT2 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Retrieved 100 of 98,524 protein–RNA pairs in 58.9 ms