Protein–RNA interactions for Protein: A0A0A0MS03

TRBV5-3, T-cell receptor beta variable 5-3 (non-functional) (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV5-3A0A0A0MS03 CTSO-201ENST00000433477 2954 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
TRBV5-3A0A0A0MS03 AL662844.4-201ENST00000606367 2838 ntBASIC16.14■□□□□ 0.17
TRBV5-3A0A0A0MS03 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC16.14■□□□□ 0.17
TRBV5-3A0A0A0MS03 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
TRBV5-3A0A0A0MS03 AMT-206ENST00000458307 1860 ntTSL 2 BASIC16.14■□□□□ 0.17
TRBV5-3A0A0A0MS03 PLEKHB1-202ENST00000354190 2380 ntAPPRIS P4 TSL 1 (best) BASIC16.14■□□□□ 0.17
TRBV5-3A0A0A0MS03 SSH3-201ENST00000308127 2871 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
TRBV5-3A0A0A0MS03 MIOS-202ENST00000405785 3095 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
TRBV5-3A0A0A0MS03 DVL1-202ENST00000378891 2926 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
TRBV5-3A0A0A0MS03 CSK-210ENST00000567571 2443 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
TRBV5-3A0A0A0MS03 IL12RB1-201ENST00000322153 1902 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
TRBV5-3A0A0A0MS03 SLC22A1-202ENST00000366963 1948 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
TRBV5-3A0A0A0MS03 SEPT8-204ENST00000378699 2289 ntTSL 5 BASIC16.14■□□□□ 0.17
TRBV5-3A0A0A0MS03 C2CD4C-201ENST00000332235 3129 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
TRBV5-3A0A0A0MS03 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
TRBV5-3A0A0A0MS03 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
TRBV5-3A0A0A0MS03 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC16.14■□□□□ 0.17
TRBV5-3A0A0A0MS03 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC16.14■□□□□ 0.17
TRBV5-3A0A0A0MS03 NUS1P1-201ENST00000446295 882 ntBASIC16.14■□□□□ 0.17
TRBV5-3A0A0A0MS03 TVP23B-202ENST00000476139 2989 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
TRBV5-3A0A0A0MS03 FAM181A-203ENST00000556222 1162 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
TRBV5-3A0A0A0MS03 SESN1-204ENST00000436639 3509 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
TRBV5-3A0A0A0MS03 RCOR3-204ENST00000452621 1827 ntTSL 2 BASIC16.14■□□□□ 0.17
TRBV5-3A0A0A0MS03 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC16.14■□□□□ 0.17
TRBV5-3A0A0A0MS03 LINC02199-201ENST00000506655 2702 ntBASIC16.14■□□□□ 0.17
TRBV5-3A0A0A0MS03 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC16.14■□□□□ 0.17
TRBV5-3A0A0A0MS03 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC16.14■□□□□ 0.17
TRBV5-3A0A0A0MS03 LRRC59-201ENST00000225972 2910 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
TRBV5-3A0A0A0MS03 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
TRBV5-3A0A0A0MS03 FTSJ1-202ENST00000348411 1892 ntAPPRIS P4 TSL 1 (best) BASIC16.14■□□□□ 0.17
TRBV5-3A0A0A0MS03 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC16.14■□□□□ 0.17
TRBV5-3A0A0A0MS03 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
TRBV5-3A0A0A0MS03 NBL1-211ENST00000618761 2051 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
TRBV5-3A0A0A0MS03 BTN1A1-202ENST00000613186 2266 ntTSL 2 BASIC16.14■□□□□ 0.17
TRBV5-3A0A0A0MS03 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC16.13■□□□□ 0.17
TRBV5-3A0A0A0MS03 BATF2-201ENST00000301887 2142 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
TRBV5-3A0A0A0MS03 PMPCAP1-201ENST00000508114 1576 ntBASIC16.13■□□□□ 0.17
TRBV5-3A0A0A0MS03 CLPTM1-203ENST00000546079 2342 ntTSL 2 BASIC16.13■□□□□ 0.17
TRBV5-3A0A0A0MS03 AC136759.1-201ENST00000534201 2163 ntTSL 2 BASIC16.13■□□□□ 0.17
TRBV5-3A0A0A0MS03 CKMT2-202ENST00000424301 1637 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
TRBV5-3A0A0A0MS03 C21orf58-201ENST00000291691 2975 ntAPPRIS P3 TSL 2 BASIC16.13■□□□□ 0.17
TRBV5-3A0A0A0MS03 RASGRP2-206ENST00000377494 2983 ntAPPRIS ALT1 TSL 2 BASIC16.13■□□□□ 0.17
TRBV5-3A0A0A0MS03 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
TRBV5-3A0A0A0MS03 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC16.13■□□□□ 0.17
TRBV5-3A0A0A0MS03 AL513523.2-202ENST00000427283 2040 ntBASIC16.13■□□□□ 0.17
TRBV5-3A0A0A0MS03 MIDN-201ENST00000300952 3790 ntAPPRIS P2 TSL 5 BASIC16.13■□□□□ 0.17
TRBV5-3A0A0A0MS03 GALNT6-201ENST00000356317 2809 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
TRBV5-3A0A0A0MS03 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
TRBV5-3A0A0A0MS03 AC211429.1-201ENST00000415277 523 ntBASIC16.13■□□□□ 0.17
TRBV5-3A0A0A0MS03 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC16.13■□□□□ 0.17
TRBV5-3A0A0A0MS03 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC16.13■□□□□ 0.17
TRBV5-3A0A0A0MS03 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC16.13■□□□□ 0.17
TRBV5-3A0A0A0MS03 KCNE1B-204ENST00000623803 811 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
TRBV5-3A0A0A0MS03 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
TRBV5-3A0A0A0MS03 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC16.13■□□□□ 0.17
TRBV5-3A0A0A0MS03 TUBGCP2-202ENST00000368562 2685 ntTSL 2 BASIC16.13■□□□□ 0.17
TRBV5-3A0A0A0MS03 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC16.13■□□□□ 0.17
TRBV5-3A0A0A0MS03 SCYL1-214ENST00000533862 2570 ntTSL 5 BASIC16.13■□□□□ 0.17
TRBV5-3A0A0A0MS03 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC16.13■□□□□ 0.17
TRBV5-3A0A0A0MS03 SIN3B-206ENST00000595541 2767 ntTSL 2 BASIC16.12■□□□□ 0.17
TRBV5-3A0A0A0MS03 PMS1-213ENST00000441310 3225 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
TRBV5-3A0A0A0MS03 KCTD14-201ENST00000353172 1691 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
TRBV5-3A0A0A0MS03 PDCD1-201ENST00000334409 2114 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
TRBV5-3A0A0A0MS03 LCK-202ENST00000336890 2117 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
TRBV5-3A0A0A0MS03 AL139384.1-201ENST00000612143 3047 ntBASIC16.12■□□□□ 0.17
TRBV5-3A0A0A0MS03 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
TRBV5-3A0A0A0MS03 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
TRBV5-3A0A0A0MS03 CCNC-209ENST00000520371 2186 ntTSL 5 BASIC16.12■□□□□ 0.17
TRBV5-3A0A0A0MS03 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
TRBV5-3A0A0A0MS03 OXT-201ENST00000217386 513 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
TRBV5-3A0A0A0MS03 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
TRBV5-3A0A0A0MS03 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
TRBV5-3A0A0A0MS03 GUK1-204ENST00000366721 689 ntTSL 3 BASIC16.12■□□□□ 0.17
TRBV5-3A0A0A0MS03 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
TRBV5-3A0A0A0MS03 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
TRBV5-3A0A0A0MS03 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC16.12■□□□□ 0.17
TRBV5-3A0A0A0MS03 ACTG1P4-201ENST00000425123 1122 ntBASIC16.12■□□□□ 0.17
TRBV5-3A0A0A0MS03 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
TRBV5-3A0A0A0MS03 DUX4L26-201ENST00000489078 1255 ntBASIC16.12■□□□□ 0.17
TRBV5-3A0A0A0MS03 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC16.12■□□□□ 0.17
TRBV5-3A0A0A0MS03 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC16.12■□□□□ 0.17
TRBV5-3A0A0A0MS03 ANAPC11-217ENST00000579978 575 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
TRBV5-3A0A0A0MS03 BDKRB1-204ENST00000611804 1085 ntAPPRIS P1 BASIC16.12■□□□□ 0.17
TRBV5-3A0A0A0MS03 CLMAT3-201ENST00000510576 1973 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
TRBV5-3A0A0A0MS03 ADGRG2-209ENST00000379876 4779 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
TRBV5-3A0A0A0MS03 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC16.12■□□□□ 0.17
TRBV5-3A0A0A0MS03 LTF-203ENST00000426532 2494 ntTSL 2 BASIC16.12■□□□□ 0.17
TRBV5-3A0A0A0MS03 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
TRBV5-3A0A0A0MS03 LINC02370-201ENST00000428272 2009 ntTSL 5 BASIC16.12■□□□□ 0.17
TRBV5-3A0A0A0MS03 PICALM-219ENST00000532317 3474 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
TRBV5-3A0A0A0MS03 SART1-201ENST00000312397 3293 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
TRBV5-3A0A0A0MS03 CTNNB1-210ENST00000453024 2841 ntTSL 2 BASIC16.12■□□□□ 0.17
TRBV5-3A0A0A0MS03 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
TRBV5-3A0A0A0MS03 AC148477.5-201ENST00000625164 1645 ntBASIC16.12■□□□□ 0.17
TRBV5-3A0A0A0MS03 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC16.12■□□□□ 0.17
TRBV5-3A0A0A0MS03 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
TRBV5-3A0A0A0MS03 SMTNL2-201ENST00000338859 1919 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
TRBV5-3A0A0A0MS03 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
TRBV5-3A0A0A0MS03 C14orf93-205ENST00000397379 1949 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
TRBV5-3A0A0A0MS03 INTS4P1-201ENST00000438455 1935 ntBASIC16.11■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 30.3 ms