Protein–RNA interactions for Protein: A0A087X179

TBC1D3E, TBC1 domain family member 3E, humanhuman

Predictions only

Length 549 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TBC1D3EA0A087X179 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
TBC1D3EA0A087X179 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC17.15■□□□□ 0.34
TBC1D3EA0A087X179 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
TBC1D3EA0A087X179 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC17.15■□□□□ 0.34
TBC1D3EA0A087X179 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
TBC1D3EA0A087X179 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC17.15■□□□□ 0.34
TBC1D3EA0A087X179 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
TBC1D3EA0A087X179 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC17.15■□□□□ 0.34
TBC1D3EA0A087X179 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
TBC1D3EA0A087X179 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC17.15■□□□□ 0.34
TBC1D3EA0A087X179 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
TBC1D3EA0A087X179 EHMT1-236ENST00000637161 5049 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
TBC1D3EA0A087X179 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
TBC1D3EA0A087X179 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
TBC1D3EA0A087X179 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
TBC1D3EA0A087X179 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
TBC1D3EA0A087X179 PMS2P2-201ENST00000425039 1128 ntBASIC17.15■□□□□ 0.34
TBC1D3EA0A087X179 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC17.15■□□□□ 0.34
TBC1D3EA0A087X179 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC17.15■□□□□ 0.34
TBC1D3EA0A087X179 ATP6V0D1-203ENST00000540149 1262 ntTSL 2 BASIC17.15■□□□□ 0.34
TBC1D3EA0A087X179 MAGIX-204ENST00000614074 778 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
TBC1D3EA0A087X179 GOSR1-201ENST00000225724 6039 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
TBC1D3EA0A087X179 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC17.15■□□□□ 0.34
TBC1D3EA0A087X179 LINC02138-201ENST00000378340 1326 ntTSL 2 BASIC17.15■□□□□ 0.34
TBC1D3EA0A087X179 REM2-202ENST00000536884 1331 ntTSL 2 BASIC17.15■□□□□ 0.34
TBC1D3EA0A087X179 PLCB2-201ENST00000260402 4616 ntAPPRIS P3 TSL 2 BASIC17.15■□□□□ 0.34
TBC1D3EA0A087X179 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
TBC1D3EA0A087X179 RGS12-203ENST00000344733 5469 ntAPPRIS P4 TSL 1 (best) BASIC17.15■□□□□ 0.34
TBC1D3EA0A087X179 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC17.15■□□□□ 0.34
TBC1D3EA0A087X179 MPV17L-201ENST00000287594 5820 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
TBC1D3EA0A087X179 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC17.14■□□□□ 0.34
TBC1D3EA0A087X179 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
TBC1D3EA0A087X179 SPSB1-202ENST00000357898 1439 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
TBC1D3EA0A087X179 CBWD2-204ENST00000433343 1411 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
TBC1D3EA0A087X179 AL390961.4-201ENST00000623958 2535 ntBASIC17.14■□□□□ 0.33
TBC1D3EA0A087X179 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
TBC1D3EA0A087X179 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
TBC1D3EA0A087X179 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
TBC1D3EA0A087X179 NEK7-201ENST00000367383 586 ntTSL 2 BASIC17.14■□□□□ 0.33
TBC1D3EA0A087X179 AMACR-204ENST00000382085 1195 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
TBC1D3EA0A087X179 AL122058.1-202ENST00000426580 252 ntTSL 3 BASIC17.14■□□□□ 0.33
TBC1D3EA0A087X179 SLC25A6P5-201ENST00000435663 894 ntBASIC17.14■□□□□ 0.33
TBC1D3EA0A087X179 DARS-AS1-203ENST00000438432 768 ntTSL 3 BASIC17.14■□□□□ 0.33
TBC1D3EA0A087X179 MCF2L-AS1-201ENST00000446789 712 ntTSL 3 BASIC17.14■□□□□ 0.33
TBC1D3EA0A087X179 AC007364.1-201ENST00000449714 1022 ntTSL 2 BASIC17.14■□□□□ 0.33
TBC1D3EA0A087X179 AL513480.1-201ENST00000451731 511 ntBASIC17.14■□□□□ 0.33
TBC1D3EA0A087X179 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC17.14■□□□□ 0.33
TBC1D3EA0A087X179 DDIAS-202ENST00000524921 607 ntAPPRIS ALT2 TSL 4 BASIC17.14■□□□□ 0.33
TBC1D3EA0A087X179 CMTM3-205ENST00000562707 714 ntAPPRIS P1 TSL 3 BASIC17.14■□□□□ 0.33
TBC1D3EA0A087X179 AC130456.4-201ENST00000568635 665 ntTSL 2 BASIC17.14■□□□□ 0.33
TBC1D3EA0A087X179 OSBPL9-222ENST00000531828 2210 ntTSL 5 BASIC17.14■□□□□ 0.33
TBC1D3EA0A087X179 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
TBC1D3EA0A087X179 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC17.14■□□□□ 0.33
TBC1D3EA0A087X179 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
TBC1D3EA0A087X179 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
TBC1D3EA0A087X179 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
TBC1D3EA0A087X179 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
TBC1D3EA0A087X179 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
TBC1D3EA0A087X179 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
TBC1D3EA0A087X179 ELL2P1-201ENST00000413990 1906 ntBASIC17.13■□□□□ 0.33
TBC1D3EA0A087X179 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
TBC1D3EA0A087X179 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
TBC1D3EA0A087X179 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
TBC1D3EA0A087X179 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC17.13■□□□□ 0.33
TBC1D3EA0A087X179 BRI3BP-201ENST00000341446 6648 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
TBC1D3EA0A087X179 MRPS18A-202ENST00000372133 1062 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
TBC1D3EA0A087X179 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC17.13■□□□□ 0.33
TBC1D3EA0A087X179 AC254562.1-201ENST00000417586 456 ntBASIC17.13■□□□□ 0.33
TBC1D3EA0A087X179 FAM185BP-201ENST00000443595 716 ntBASIC17.13■□□□□ 0.33
TBC1D3EA0A087X179 PAWRP1-201ENST00000451083 565 ntBASIC17.13■□□□□ 0.33
TBC1D3EA0A087X179 CEMP1-201ENST00000565480 519 ntAPPRIS ALT2 TSL 3 BASIC17.13■□□□□ 0.33
TBC1D3EA0A087X179 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC17.13■□□□□ 0.33
TBC1D3EA0A087X179 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC17.13■□□□□ 0.33
TBC1D3EA0A087X179 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC17.13■□□□□ 0.33
TBC1D3EA0A087X179 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC17.13■□□□□ 0.33
TBC1D3EA0A087X179 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
TBC1D3EA0A087X179 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC17.13■□□□□ 0.33
TBC1D3EA0A087X179 ANKFY1-202ENST00000570535 6458 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
TBC1D3EA0A087X179 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC17.13■□□□□ 0.33
TBC1D3EA0A087X179 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
TBC1D3EA0A087X179 ETV2-204ENST00000403402 1335 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
TBC1D3EA0A087X179 RHD-207ENST00000454452 1303 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
TBC1D3EA0A087X179 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
TBC1D3EA0A087X179 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
TBC1D3EA0A087X179 SLC8A3-202ENST00000356921 5250 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
TBC1D3EA0A087X179 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
TBC1D3EA0A087X179 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC17.13■□□□□ 0.33
TBC1D3EA0A087X179 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TBC1D3EA0A087X179 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
TBC1D3EA0A087X179 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TBC1D3EA0A087X179 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC17.12■□□□□ 0.33
TBC1D3EA0A087X179 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TBC1D3EA0A087X179 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
TBC1D3EA0A087X179 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
TBC1D3EA0A087X179 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TBC1D3EA0A087X179 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
TBC1D3EA0A087X179 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
TBC1D3EA0A087X179 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TBC1D3EA0A087X179 ARMC12-201ENST00000288065 1169 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
TBC1D3EA0A087X179 ATP23-201ENST00000300145 1245 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 42.5 ms