Protein–RNA interactions for Protein: Q9Y446

PKP3, Plakophilin-3, humanhuman

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3Q9Y446 CACNA1A-238ENST00000637276 7135 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
PKP3Q9Y446 MAGI1-213ENST00000483466 4791 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
PKP3Q9Y446 CHRNA5-201ENST00000299565 3623 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
PKP3Q9Y446 MTDH-201ENST00000336273 6177 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
PKP3Q9Y446 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
PKP3Q9Y446 AKR1C7P-201ENST00000305623 895 ntBASIC17.35■□□□□ 0.37
PKP3Q9Y446 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
PKP3Q9Y446 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC17.35■□□□□ 0.37
PKP3Q9Y446 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
PKP3Q9Y446 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC17.35■□□□□ 0.37
PKP3Q9Y446 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
PKP3Q9Y446 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC17.35■□□□□ 0.37
PKP3Q9Y446 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
PKP3Q9Y446 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC17.35■□□□□ 0.37
PKP3Q9Y446 FGFR3P6-201ENST00000457012 610 ntBASIC17.35■□□□□ 0.37
PKP3Q9Y446 BX005266.1-201ENST00000473402 457 ntBASIC17.35■□□□□ 0.37
PKP3Q9Y446 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC17.35■□□□□ 0.37
PKP3Q9Y446 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC17.35■□□□□ 0.37
PKP3Q9Y446 BMF-207ENST00000559701 630 ntTSL 3 BASIC17.35■□□□□ 0.37
PKP3Q9Y446 AL022326.1-202ENST00000641533 845 ntBASIC17.35■□□□□ 0.37
PKP3Q9Y446 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC17.35■□□□□ 0.37
PKP3Q9Y446 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
PKP3Q9Y446 LINC01979-201ENST00000576738 5271 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
PKP3Q9Y446 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
PKP3Q9Y446 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
PKP3Q9Y446 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
PKP3Q9Y446 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC17.35■□□□□ 0.37
PKP3Q9Y446 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
PKP3Q9Y446 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC17.35■□□□□ 0.37
PKP3Q9Y446 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
PKP3Q9Y446 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
PKP3Q9Y446 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
PKP3Q9Y446 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
PKP3Q9Y446 ARHGEF40-201ENST00000298694 5919 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
PKP3Q9Y446 FAM153A-203ENST00000440605 1966 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
PKP3Q9Y446 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC17.35■□□□□ 0.37
PKP3Q9Y446 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC17.35■□□□□ 0.37
PKP3Q9Y446 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC17.35■□□□□ 0.37
PKP3Q9Y446 GPR149-201ENST00000389740 2323 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
PKP3Q9Y446 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
PKP3Q9Y446 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
PKP3Q9Y446 DOCK7-203ENST00000404627 2678 ntTSL 2 BASIC17.34■□□□□ 0.37
PKP3Q9Y446 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC17.34■□□□□ 0.37
PKP3Q9Y446 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
PKP3Q9Y446 BEND4-202ENST00000504360 8692 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
PKP3Q9Y446 TJP2-202ENST00000377245 4611 ntAPPRIS P4 TSL 1 (best) BASIC17.34■□□□□ 0.37
PKP3Q9Y446 LTBP2-205ENST00000556690 5614 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
PKP3Q9Y446 PTCH1-201ENST00000331920 8057 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
PKP3Q9Y446 CXorf67-201ENST00000342995 1929 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
PKP3Q9Y446 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
PKP3Q9Y446 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
PKP3Q9Y446 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
PKP3Q9Y446 HIST2H3DP1-201ENST00000401004 416 ntBASIC17.34■□□□□ 0.37
PKP3Q9Y446 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
PKP3Q9Y446 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
PKP3Q9Y446 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC17.34■□□□□ 0.37
PKP3Q9Y446 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
PKP3Q9Y446 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
PKP3Q9Y446 PRYP5-201ENST00000451909 266 ntBASIC17.34■□□□□ 0.37
PKP3Q9Y446 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC17.34■□□□□ 0.37
PKP3Q9Y446 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
PKP3Q9Y446 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC17.34■□□□□ 0.37
PKP3Q9Y446 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
PKP3Q9Y446 TNFSF13-208ENST00000483039 959 ntTSL 2 BASIC17.34■□□□□ 0.37
PKP3Q9Y446 AF238378.1-201ENST00000526806 358 ntBASIC17.34■□□□□ 0.37
PKP3Q9Y446 KRT126P-201ENST00000549467 1181 ntBASIC17.34■□□□□ 0.37
PKP3Q9Y446 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
PKP3Q9Y446 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
PKP3Q9Y446 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC17.34■□□□□ 0.37
PKP3Q9Y446 NKAPP1-205ENST00000585790 367 ntBASIC17.34■□□□□ 0.37
PKP3Q9Y446 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
PKP3Q9Y446 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
PKP3Q9Y446 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
PKP3Q9Y446 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC17.34■□□□□ 0.37
PKP3Q9Y446 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC17.34■□□□□ 0.37
PKP3Q9Y446 AC097637.2-201ENST00000624096 1997 ntBASIC17.34■□□□□ 0.37
PKP3Q9Y446 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC17.34■□□□□ 0.37
PKP3Q9Y446 AC116353.5-201ENST00000638148 1699 ntBASIC17.34■□□□□ 0.37
PKP3Q9Y446 NLGN2-201ENST00000302926 4642 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
PKP3Q9Y446 PIEZO1-201ENST00000301015 8072 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
PKP3Q9Y446 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
PKP3Q9Y446 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
PKP3Q9Y446 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC17.34■□□□□ 0.37
PKP3Q9Y446 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC17.33■□□□□ 0.37
PKP3Q9Y446 OSBP2-202ENST00000401475 2468 ntTSL 2 BASIC17.33■□□□□ 0.37
PKP3Q9Y446 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
PKP3Q9Y446 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.37
PKP3Q9Y446 AC108860.2-201ENST00000562760 2183 ntBASIC17.33■□□□□ 0.37
PKP3Q9Y446 AC004817.3-201ENST00000602957 2129 ntBASIC17.33■□□□□ 0.37
PKP3Q9Y446 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.37
PKP3Q9Y446 AC093525.9-201ENST00000624961 1746 ntBASIC17.33■□□□□ 0.37
PKP3Q9Y446 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
PKP3Q9Y446 KANSL1L-201ENST00000281772 4754 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.37
PKP3Q9Y446 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.37
PKP3Q9Y446 AC012313.1-201ENST00000593393 3059 ntBASIC17.33■□□□□ 0.37
PKP3Q9Y446 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
PKP3Q9Y446 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
PKP3Q9Y446 AC004870.1-201ENST00000315132 882 ntBASIC17.33■□□□□ 0.36
PKP3Q9Y446 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
PKP3Q9Y446 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 38.9 ms