Protein–RNA interactions for Protein: Q9UND3

NPIPA1, Nuclear pore complex-interacting protein family member A1, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA1Q9UND3 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
NPIPA1Q9UND3 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
NPIPA1Q9UND3 DPY30-201ENST00000295066 631 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
NPIPA1Q9UND3 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
NPIPA1Q9UND3 DPY30-202ENST00000342166 708 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
NPIPA1Q9UND3 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC15.96■□□□□ 0.15
NPIPA1Q9UND3 COX5BP2-201ENST00000392354 334 ntBASIC15.96■□□□□ 0.15
NPIPA1Q9UND3 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC15.96■□□□□ 0.15
NPIPA1Q9UND3 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC15.96■□□□□ 0.15
NPIPA1Q9UND3 C11orf74-203ENST00000446510 1062 ntAPPRIS P3 TSL 5 BASIC15.96■□□□□ 0.15
NPIPA1Q9UND3 PGAM5P1-201ENST00000518923 814 ntBASIC15.96■□□□□ 0.15
NPIPA1Q9UND3 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC15.96■□□□□ 0.15
NPIPA1Q9UND3 TBL3-205ENST00000568546 6803 ntAPPRIS P2 TSL 1 (best) BASIC15.96■□□□□ 0.15
NPIPA1Q9UND3 NOMO1-208ENST00000620755 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
NPIPA1Q9UND3 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC15.96■□□□□ 0.15
NPIPA1Q9UND3 SCRIB-202ENST00000356994 5218 ntAPPRIS P4 TSL 2 BASIC15.96■□□□□ 0.15
NPIPA1Q9UND3 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
NPIPA1Q9UND3 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC15.96■□□□□ 0.15
NPIPA1Q9UND3 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC15.96■□□□□ 0.15
NPIPA1Q9UND3 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC15.96■□□□□ 0.15
NPIPA1Q9UND3 TJP1-201ENST00000346128 7950 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.15
NPIPA1Q9UND3 PLPPR4-202ENST00000370185 5369 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
NPIPA1Q9UND3 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC15.96■□□□□ 0.14
NPIPA1Q9UND3 MED29-202ENST00000594368 1471 ntTSL 2 BASIC15.96■□□□□ 0.14
NPIPA1Q9UND3 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC15.96■□□□□ 0.14
NPIPA1Q9UND3 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
NPIPA1Q9UND3 NLGN2-201ENST00000302926 4642 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
NPIPA1Q9UND3 TJP2-202ENST00000377245 4611 ntAPPRIS P4 TSL 1 (best) BASIC15.96■□□□□ 0.14
NPIPA1Q9UND3 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.14
NPIPA1Q9UND3 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC15.95■□□□□ 0.14
NPIPA1Q9UND3 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
NPIPA1Q9UND3 ANAPC13-206ENST00000514612 1420 ntAPPRIS P1 TSL 2 BASIC15.95■□□□□ 0.14
NPIPA1Q9UND3 FAM135A-205ENST00000418814 6415 ntTSL 5 BASIC15.95■□□□□ 0.14
NPIPA1Q9UND3 DUSP8-202ENST00000397374 4480 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
NPIPA1Q9UND3 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC15.95■□□□□ 0.14
NPIPA1Q9UND3 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC15.95■□□□□ 0.14
NPIPA1Q9UND3 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC15.95■□□□□ 0.14
NPIPA1Q9UND3 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC15.95■□□□□ 0.14
NPIPA1Q9UND3 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC15.95■□□□□ 0.14
NPIPA1Q9UND3 TAOK2-202ENST00000308893 5169 ntAPPRIS P4 TSL 1 (best) BASIC15.95■□□□□ 0.14
NPIPA1Q9UND3 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC15.95■□□□□ 0.14
NPIPA1Q9UND3 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
NPIPA1Q9UND3 HSPB1-201ENST00000248553 909 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
NPIPA1Q9UND3 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC15.95■□□□□ 0.14
NPIPA1Q9UND3 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
NPIPA1Q9UND3 C2orf49-202ENST00000410049 854 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
NPIPA1Q9UND3 SPDYE21P-201ENST00000413323 827 ntBASIC15.95■□□□□ 0.14
NPIPA1Q9UND3 AC007967.2-201ENST00000432613 625 ntBASIC15.95■□□□□ 0.14
NPIPA1Q9UND3 HS6ST1P1-201ENST00000481504 1234 ntBASIC15.95■□□□□ 0.14
NPIPA1Q9UND3 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC15.95■□□□□ 0.14
NPIPA1Q9UND3 AC068389.2-201ENST00000529518 430 ntTSL 2 BASIC15.95■□□□□ 0.14
NPIPA1Q9UND3 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC15.95■□□□□ 0.14
NPIPA1Q9UND3 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC15.95■□□□□ 0.14
NPIPA1Q9UND3 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC15.95■□□□□ 0.14
NPIPA1Q9UND3 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC15.95■□□□□ 0.14
NPIPA1Q9UND3 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC15.95■□□□□ 0.14
NPIPA1Q9UND3 AC006557.2-201ENST00000592985 1240 ntBASIC15.95■□□□□ 0.14
NPIPA1Q9UND3 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC15.95■□□□□ 0.14
NPIPA1Q9UND3 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC15.95■□□□□ 0.14
NPIPA1Q9UND3 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC15.95■□□□□ 0.14
NPIPA1Q9UND3 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC15.95■□□□□ 0.14
NPIPA1Q9UND3 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC15.95■□□□□ 0.14
NPIPA1Q9UND3 MGEA5-202ENST00000361464 5155 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
NPIPA1Q9UND3 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
NPIPA1Q9UND3 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
NPIPA1Q9UND3 AL355312.1-201ENST00000407115 2176 ntBASIC15.94■□□□□ 0.14
NPIPA1Q9UND3 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC15.94■□□□□ 0.14
NPIPA1Q9UND3 VAV2-202ENST00000371851 5101 ntAPPRIS ALT2 TSL 5 BASIC15.94■□□□□ 0.14
NPIPA1Q9UND3 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
NPIPA1Q9UND3 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC15.94■□□□□ 0.14
NPIPA1Q9UND3 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC15.94■□□□□ 0.14
NPIPA1Q9UND3 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC15.94■□□□□ 0.14
NPIPA1Q9UND3 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC15.94■□□□□ 0.14
NPIPA1Q9UND3 EIF4G3-212ENST00000602326 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
NPIPA1Q9UND3 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
NPIPA1Q9UND3 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
NPIPA1Q9UND3 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC15.94■□□□□ 0.14
NPIPA1Q9UND3 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC15.94■□□□□ 0.14
NPIPA1Q9UND3 KCNB1-203ENST00000635465 4114 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
NPIPA1Q9UND3 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC15.94■□□□□ 0.14
NPIPA1Q9UND3 DHDH-201ENST00000221403 1081 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
NPIPA1Q9UND3 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
NPIPA1Q9UND3 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
NPIPA1Q9UND3 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC15.94■□□□□ 0.14
NPIPA1Q9UND3 DDX43P3-201ENST00000441064 443 ntBASIC15.94■□□□□ 0.14
NPIPA1Q9UND3 CR559946.1-201ENST00000453835 531 ntTSL 4 BASIC15.94■□□□□ 0.14
NPIPA1Q9UND3 RNA5SP416-201ENST00000516838 111 ntBASIC15.94■□□□□ 0.14
NPIPA1Q9UND3 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC15.94■□□□□ 0.14
NPIPA1Q9UND3 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC15.94■□□□□ 0.14
NPIPA1Q9UND3 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC15.94■□□□□ 0.14
NPIPA1Q9UND3 AC005593.1-201ENST00000624894 515 ntBASIC15.94■□□□□ 0.14
NPIPA1Q9UND3 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC15.94■□□□□ 0.14
NPIPA1Q9UND3 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC15.94■□□□□ 0.14
NPIPA1Q9UND3 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC15.94■□□□□ 0.14
NPIPA1Q9UND3 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
NPIPA1Q9UND3 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
NPIPA1Q9UND3 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
NPIPA1Q9UND3 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC15.94■□□□□ 0.14
NPIPA1Q9UND3 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC15.94■□□□□ 0.14
NPIPA1Q9UND3 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC15.94■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 28.9 ms