Protein–RNA interactions for Protein: Q9NUG4

CCM2L, Cerebral cavernous malformations 2 protein-like, humanhuman

Predicted RBP Predictions only

Length 571 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2LQ9NUG4 BMI1-201ENST00000376663 3428 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CCM2LQ9NUG4 YBEY-201ENST00000329319 1019 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CCM2LQ9NUG4 SLC25A1P3-201ENST00000395415 828 ntBASIC16.48■□□□□ 0.23
CCM2LQ9NUG4 YBEY-206ENST00000397701 744 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
CCM2LQ9NUG4 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
CCM2LQ9NUG4 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
CCM2LQ9NUG4 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC16.48■□□□□ 0.23
CCM2LQ9NUG4 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC16.48■□□□□ 0.23
CCM2LQ9NUG4 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC16.48■□□□□ 0.23
CCM2LQ9NUG4 AC112907.2-201ENST00000448639 330 ntBASIC16.48■□□□□ 0.23
CCM2LQ9NUG4 PGAP2-206ENST00000459679 795 ntTSL 2 BASIC16.48■□□□□ 0.23
CCM2LQ9NUG4 SNX5-210ENST00000481323 562 ntTSL 3 BASIC16.48■□□□□ 0.23
CCM2LQ9NUG4 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC16.48■□□□□ 0.23
CCM2LQ9NUG4 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC16.48■□□□□ 0.23
CCM2LQ9NUG4 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC16.48■□□□□ 0.23
CCM2LQ9NUG4 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC16.48■□□□□ 0.23
CCM2LQ9NUG4 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CCM2LQ9NUG4 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC16.48■□□□□ 0.23
CCM2LQ9NUG4 ALPPL2-201ENST00000295453 2493 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CCM2LQ9NUG4 CARNS1-201ENST00000307823 3942 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
CCM2LQ9NUG4 UNC5D-203ENST00000416672 3532 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
CCM2LQ9NUG4 HNF1A-215ENST00000615446 2344 ntTSL 5 BASIC16.48■□□□□ 0.23
CCM2LQ9NUG4 CRY2-211ENST00000616080 1936 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
CCM2LQ9NUG4 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
CCM2LQ9NUG4 BX276092.7-203ENST00000637198 1536 ntBASIC16.48■□□□□ 0.23
CCM2LQ9NUG4 MAPK14-201ENST00000229794 3779 ntAPPRIS P5 TSL 1 (best) BASIC16.48■□□□□ 0.23
CCM2LQ9NUG4 LCK-201ENST00000333070 2166 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
CCM2LQ9NUG4 SLA2-202ENST00000360672 2171 ntTSL 5 BASIC16.48■□□□□ 0.23
CCM2LQ9NUG4 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC16.48■□□□□ 0.23
CCM2LQ9NUG4 INTS14-209ENST00000567744 2419 ntTSL 2 BASIC16.48■□□□□ 0.23
CCM2LQ9NUG4 GATA3-201ENST00000346208 2654 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
CCM2LQ9NUG4 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
CCM2LQ9NUG4 MAP6-202ENST00000434603 4329 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
CCM2LQ9NUG4 ASXL1-202ENST00000375687 7031 ntAPPRIS P2 TSL 5 BASIC16.48■□□□□ 0.23
CCM2LQ9NUG4 SPATS2L-202ENST00000360760 2119 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
CCM2LQ9NUG4 GNG2-213ENST00000556766 2125 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CCM2LQ9NUG4 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CCM2LQ9NUG4 HDAC11-214ENST00000446613 2875 ntTSL 5 BASIC16.48■□□□□ 0.23
CCM2LQ9NUG4 HDHD2-201ENST00000300605 2212 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CCM2LQ9NUG4 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
CCM2LQ9NUG4 ARHGAP6-202ENST00000337414 5117 ntAPPRIS P4 TSL 1 (best) BASIC16.47■□□□□ 0.23
CCM2LQ9NUG4 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC16.47■□□□□ 0.23
CCM2LQ9NUG4 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CCM2LQ9NUG4 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC16.47■□□□□ 0.23
CCM2LQ9NUG4 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
CCM2LQ9NUG4 GLDC-201ENST00000321612 3900 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CCM2LQ9NUG4 AL596257.1-201ENST00000641463 2694 ntBASIC16.47■□□□□ 0.23
CCM2LQ9NUG4 RAI2-206ENST00000545871 2421 ntAPPRIS P1 TSL 4 BASIC16.47■□□□□ 0.23
CCM2LQ9NUG4 TMC3-AS1-203ENST00000559781 2195 ntTSL 3 BASIC16.47■□□□□ 0.23
CCM2LQ9NUG4 ZSCAN25-201ENST00000262941 1652 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
CCM2LQ9NUG4 TAPBP-238ENST00000475304 1686 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
CCM2LQ9NUG4 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
CCM2LQ9NUG4 MINK1-202ENST00000355280 4961 ntAPPRIS P4 TSL 1 (best) BASIC16.47■□□□□ 0.23
CCM2LQ9NUG4 SIGLEC7-202ENST00000317643 1754 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CCM2LQ9NUG4 HMBOX1-212ENST00000558662 1765 ntTSL 5 BASIC16.47■□□□□ 0.23
CCM2LQ9NUG4 SLC37A4-217ENST00000545985 2606 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
CCM2LQ9NUG4 PEX6-202ENST00000304611 3478 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CCM2LQ9NUG4 PLEKHB1-202ENST00000354190 2380 ntAPPRIS P4 TSL 1 (best) BASIC16.47■□□□□ 0.23
CCM2LQ9NUG4 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CCM2LQ9NUG4 PAFAH1B3-201ENST00000262890 1003 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CCM2LQ9NUG4 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CCM2LQ9NUG4 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC16.47■□□□□ 0.23
CCM2LQ9NUG4 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
CCM2LQ9NUG4 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC16.47■□□□□ 0.23
CCM2LQ9NUG4 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC16.47■□□□□ 0.23
CCM2LQ9NUG4 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
CCM2LQ9NUG4 ZNF444P1-201ENST00000559497 298 ntBASIC16.47■□□□□ 0.23
CCM2LQ9NUG4 C1QTNF1-205ENST00000578229 1294 ntTSL 4 BASIC16.47■□□□□ 0.23
CCM2LQ9NUG4 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC16.47■□□□□ 0.23
CCM2LQ9NUG4 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC16.47■□□□□ 0.23
CCM2LQ9NUG4 CHMP2A-208ENST00000601220 885 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CCM2LQ9NUG4 OSBPL1A-203ENST00000399441 1887 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
CCM2LQ9NUG4 OR6D1P-203ENST00000641209 4860 ntBASIC16.47■□□□□ 0.23
CCM2LQ9NUG4 NTRK2-206ENST00000376213 5560 ntAPPRIS ALT1 TSL 5 BASIC16.47■□□□□ 0.23
CCM2LQ9NUG4 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
CCM2LQ9NUG4 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
CCM2LQ9NUG4 TUBGCP2-202ENST00000368562 2685 ntTSL 2 BASIC16.47■□□□□ 0.23
CCM2LQ9NUG4 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC16.47■□□□□ 0.23
CCM2LQ9NUG4 RDH12-201ENST00000267502 1833 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
CCM2LQ9NUG4 WRAP53-203ENST00000431639 1818 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CCM2LQ9NUG4 WRAP53-204ENST00000457584 1828 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CCM2LQ9NUG4 MPV17L-201ENST00000287594 5820 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
CCM2LQ9NUG4 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC16.47■□□□□ 0.23
CCM2LQ9NUG4 TIGD2-202ENST00000603357 3217 ntAPPRIS P1 TSL 4 BASIC16.47■□□□□ 0.23
CCM2LQ9NUG4 PAPD5-202ENST00000436909 4635 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
CCM2LQ9NUG4 C21orf58-201ENST00000291691 2975 ntAPPRIS P3 TSL 2 BASIC16.47■□□□□ 0.23
CCM2LQ9NUG4 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC16.47■□□□□ 0.23
CCM2LQ9NUG4 SENP1-204ENST00000549518 2260 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
CCM2LQ9NUG4 AL513523.2-202ENST00000427283 2040 ntBASIC16.46■□□□□ 0.23
CCM2LQ9NUG4 SSR4-201ENST00000320857 1671 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.23
CCM2LQ9NUG4 AC022188.1-201ENST00000620960 1664 ntBASIC16.46■□□□□ 0.23
CCM2LQ9NUG4 PIAS4-201ENST00000262971 3159 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CCM2LQ9NUG4 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
CCM2LQ9NUG4 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CCM2LQ9NUG4 PPP3CA-201ENST00000323055 4519 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
CCM2LQ9NUG4 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
CCM2LQ9NUG4 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CCM2LQ9NUG4 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC16.46■□□□□ 0.23
CCM2LQ9NUG4 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
CCM2LQ9NUG4 ELAVL2-208ENST00000544538 3789 ntAPPRIS P3 TSL 5 BASIC16.46■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 25.1 ms