Protein–RNA interactions for Protein: Q9BWW4

SSBP3, Single-stranded DNA-binding protein 3, humanhuman

Predicted RBP Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3Q9BWW4 AC005593.1-201ENST00000624894 515 ntBASIC14.44□□□□□ -0.1
SSBP3Q9BWW4 PGM5P2-202ENST00000637225 1043 ntBASIC14.44□□□□□ -0.1
SSBP3Q9BWW4 ADORA1-209ENST00000640524 653 ntTSL 5 BASIC14.44□□□□□ -0.1
SSBP3Q9BWW4 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
SSBP3Q9BWW4 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC14.44□□□□□ -0.1
SSBP3Q9BWW4 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
SSBP3Q9BWW4 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC14.44□□□□□ -0.1
SSBP3Q9BWW4 SALL3-202ENST00000537592 6555 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
SSBP3Q9BWW4 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC14.44□□□□□ -0.1
SSBP3Q9BWW4 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
SSBP3Q9BWW4 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC14.44□□□□□ -0.1
SSBP3Q9BWW4 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
SSBP3Q9BWW4 LINC02381-201ENST00000508564 1369 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
SSBP3Q9BWW4 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
SSBP3Q9BWW4 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC14.44□□□□□ -0.1
SSBP3Q9BWW4 SMCHD1-201ENST00000320876 8821 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
SSBP3Q9BWW4 KIF16B-201ENST00000354981 5261 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
SSBP3Q9BWW4 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
SSBP3Q9BWW4 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
SSBP3Q9BWW4 TMEM65-201ENST00000297632 9029 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
SSBP3Q9BWW4 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
SSBP3Q9BWW4 TEF-201ENST00000266304 4394 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
SSBP3Q9BWW4 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
SSBP3Q9BWW4 AC006116.8-202ENST00000587620 1550 ntBASIC14.43□□□□□ -0.1
SSBP3Q9BWW4 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC14.43□□□□□ -0.1
SSBP3Q9BWW4 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC14.43□□□□□ -0.1
SSBP3Q9BWW4 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
SSBP3Q9BWW4 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
SSBP3Q9BWW4 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
SSBP3Q9BWW4 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC14.43□□□□□ -0.1
SSBP3Q9BWW4 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC14.43□□□□□ -0.1
SSBP3Q9BWW4 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC14.43□□□□□ -0.1
SSBP3Q9BWW4 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC14.43□□□□□ -0.1
SSBP3Q9BWW4 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
SSBP3Q9BWW4 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
SSBP3Q9BWW4 ZFAND2B-207ENST00000409412 569 ntTSL 2 BASIC14.43□□□□□ -0.1
SSBP3Q9BWW4 PMS2P1-201ENST00000431037 1228 ntBASIC14.43□□□□□ -0.1
SSBP3Q9BWW4 PRSS21-202ENST00000450020 1106 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
SSBP3Q9BWW4 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC14.43□□□□□ -0.1
SSBP3Q9BWW4 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
SSBP3Q9BWW4 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
SSBP3Q9BWW4 AC097637.2-201ENST00000624096 1997 ntBASIC14.43□□□□□ -0.1
SSBP3Q9BWW4 CHRNG-201ENST00000389492 1398 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
SSBP3Q9BWW4 RND2-202ENST00000587250 4147 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
SSBP3Q9BWW4 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
SSBP3Q9BWW4 MARCH1-203ENST00000503008 5877 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
SSBP3Q9BWW4 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
SSBP3Q9BWW4 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC14.43□□□□□ -0.1
SSBP3Q9BWW4 AP002414.3-201ENST00000589352 1468 ntBASIC14.43□□□□□ -0.1
SSBP3Q9BWW4 AMT-250ENST00000637682 1823 ntTSL 5 BASIC14.43□□□□□ -0.1
SSBP3Q9BWW4 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC14.43□□□□□ -0.1
SSBP3Q9BWW4 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC14.43□□□□□ -0.1
SSBP3Q9BWW4 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC14.43□□□□□ -0.1
SSBP3Q9BWW4 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC14.43□□□□□ -0.1
SSBP3Q9BWW4 TLCD2-201ENST00000330676 5971 ntAPPRIS P1 TSL 2 BASIC14.43□□□□□ -0.1
SSBP3Q9BWW4 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
SSBP3Q9BWW4 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC14.42□□□□□ -0.1
SSBP3Q9BWW4 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC14.42□□□□□ -0.1
SSBP3Q9BWW4 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC14.42□□□□□ -0.1
SSBP3Q9BWW4 NAA50-201ENST00000240922 6135 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
SSBP3Q9BWW4 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
SSBP3Q9BWW4 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
SSBP3Q9BWW4 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
SSBP3Q9BWW4 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC14.42□□□□□ -0.1
SSBP3Q9BWW4 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
SSBP3Q9BWW4 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC14.42□□□□□ -0.1
SSBP3Q9BWW4 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC14.42□□□□□ -0.1
SSBP3Q9BWW4 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
SSBP3Q9BWW4 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC14.42□□□□□ -0.1
SSBP3Q9BWW4 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
SSBP3Q9BWW4 ATXN2-201ENST00000377617 4702 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
SSBP3Q9BWW4 MAPT-205ENST00000351559 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
SSBP3Q9BWW4 DHDH-201ENST00000221403 1081 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
SSBP3Q9BWW4 CENPM-204ENST00000402420 688 ntTSL 5 BASIC14.42□□□□□ -0.1
SSBP3Q9BWW4 KRT18P27-201ENST00000427733 1299 ntBASIC14.42□□□□□ -0.1
SSBP3Q9BWW4 AC136632.2-201ENST00000512891 861 ntBASIC14.42□□□□□ -0.1
SSBP3Q9BWW4 IGHV3-22-201ENST00000520721 359 ntBASIC14.42□□□□□ -0.1
SSBP3Q9BWW4 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC14.42□□□□□ -0.1
SSBP3Q9BWW4 AC068389.2-201ENST00000529518 430 ntTSL 2 BASIC14.42□□□□□ -0.1
SSBP3Q9BWW4 ETFA-208ENST00000559602 792 ntTSL 3 BASIC14.42□□□□□ -0.1
SSBP3Q9BWW4 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC14.42□□□□□ -0.1
SSBP3Q9BWW4 AC106730.1-201ENST00000566722 1090 ntBASIC14.42□□□□□ -0.1
SSBP3Q9BWW4 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC14.42□□□□□ -0.1
SSBP3Q9BWW4 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC14.42□□□□□ -0.1
SSBP3Q9BWW4 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC14.42□□□□□ -0.1
SSBP3Q9BWW4 METTL23-215ENST00000615984 1171 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
SSBP3Q9BWW4 AC004706.3-202ENST00000621574 984 ntBASIC14.42□□□□□ -0.1
SSBP3Q9BWW4 CAND2-206ENST00000626378 333 ntTSL 5 BASIC14.42□□□□□ -0.1
SSBP3Q9BWW4 ANKFY1-202ENST00000570535 6458 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
SSBP3Q9BWW4 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
SSBP3Q9BWW4 AC046185.3-201ENST00000623228 1824 ntBASIC14.42□□□□□ -0.1
SSBP3Q9BWW4 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC14.42□□□□□ -0.1
SSBP3Q9BWW4 ARHGAP11A-201ENST00000361627 5898 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
SSBP3Q9BWW4 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
SSBP3Q9BWW4 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
SSBP3Q9BWW4 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
SSBP3Q9BWW4 BACE1-201ENST00000313005 6326 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
SSBP3Q9BWW4 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC14.42□□□□□ -0.1
SSBP3Q9BWW4 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
SSBP3Q9BWW4 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 51.1 ms