Protein–RNA interactions for Protein: Q99805

TM9SF2, Transmembrane 9 superfamily member 2, humanhuman

Predictions only

Length 663 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF2Q99805 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC16.08■□□□□ 0.16
TM9SF2Q99805 LZTS3-202ENST00000337576 4238 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.16
TM9SF2Q99805 LIFR-202ENST00000453190 4253 ntAPPRIS P1 TSL 2 BASIC16.08■□□□□ 0.16
TM9SF2Q99805 LINC01979-201ENST00000576738 5271 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
TM9SF2Q99805 GIT2-202ENST00000354574 5387 ntTSL 5 BASIC16.08■□□□□ 0.16
TM9SF2Q99805 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
TM9SF2Q99805 SEMA5B-202ENST00000357599 4792 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.16
TM9SF2Q99805 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC16.08■□□□□ 0.16
TM9SF2Q99805 ARHGEF40-201ENST00000298694 5919 ntAPPRIS P1 TSL 2 BASIC16.08■□□□□ 0.16
TM9SF2Q99805 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
TM9SF2Q99805 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
TM9SF2Q99805 AL121761.2-201ENST00000598007 1648 ntBASIC16.08■□□□□ 0.16
TM9SF2Q99805 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
TM9SF2Q99805 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
TM9SF2Q99805 TMEM127-202ENST00000432959 3099 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
TM9SF2Q99805 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.16
TM9SF2Q99805 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
TM9SF2Q99805 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC16.07■□□□□ 0.16
TM9SF2Q99805 CHRNA7-207ENST00000635884 1975 ntTSL 5 BASIC16.07■□□□□ 0.16
TM9SF2Q99805 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC16.07■□□□□ 0.16
TM9SF2Q99805 PODNL1-204ENST00000538517 2744 ntTSL 2 BASIC16.07■□□□□ 0.16
TM9SF2Q99805 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
TM9SF2Q99805 NFATC4-208ENST00000553708 5367 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
TM9SF2Q99805 TMEM150B-201ENST00000326652 943 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
TM9SF2Q99805 DFFB-203ENST00000341385 572 ntTSL 5 BASIC16.07■□□□□ 0.16
TM9SF2Q99805 TDRD7-201ENST00000355295 3834 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
TM9SF2Q99805 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
TM9SF2Q99805 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC16.07■□□□□ 0.16
TM9SF2Q99805 AQP12A-202ENST00000429564 1110 ntAPPRIS P5 TSL 5 BASIC16.07■□□□□ 0.16
TM9SF2Q99805 FAM41C-202ENST00000432963 504 ntTSL 2 BASIC16.07■□□□□ 0.16
TM9SF2Q99805 BET1L-206ENST00000486280 665 ntTSL 3 BASIC16.07■□□□□ 0.16
TM9SF2Q99805 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC16.07■□□□□ 0.16
TM9SF2Q99805 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC16.07■□□□□ 0.16
TM9SF2Q99805 MIF4GD-205ENST00000578305 569 ntTSL 5 BASIC16.07■□□□□ 0.16
TM9SF2Q99805 PPP1R1B-208ENST00000580825 1038 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
TM9SF2Q99805 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
TM9SF2Q99805 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC16.07■□□□□ 0.16
TM9SF2Q99805 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
TM9SF2Q99805 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
TM9SF2Q99805 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC16.07■□□□□ 0.16
TM9SF2Q99805 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC16.07■□□□□ 0.16
TM9SF2Q99805 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC16.07■□□□□ 0.16
TM9SF2Q99805 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
TM9SF2Q99805 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC16.07■□□□□ 0.16
TM9SF2Q99805 CDK19-202ENST00000368911 6246 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
TM9SF2Q99805 TPR-209ENST00000613151 2478 ntTSL 5 BASIC16.07■□□□□ 0.16
TM9SF2Q99805 AL357673.1-201ENST00000637610 2542 ntAPPRIS P5 TSL 5 BASIC16.07■□□□□ 0.16
TM9SF2Q99805 C2orf50-201ENST00000381585 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
TM9SF2Q99805 CICP6-201ENST00000457191 2729 ntBASIC16.07■□□□□ 0.16
TM9SF2Q99805 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
TM9SF2Q99805 CDC42BPG-201ENST00000342711 5742 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
TM9SF2Q99805 BICD2-201ENST00000356884 6427 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
TM9SF2Q99805 FER1L4-210ENST00000615531 5998 ntBASIC16.06■□□□□ 0.16
TM9SF2Q99805 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
TM9SF2Q99805 LAMC1-201ENST00000258341 7889 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
TM9SF2Q99805 ANAPC2-201ENST00000323927 2632 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
TM9SF2Q99805 ITGAV-202ENST00000374907 6903 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
TM9SF2Q99805 PRR5-203ENST00000403581 2279 ntTSL 2 BASIC16.06■□□□□ 0.16
TM9SF2Q99805 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC16.06■□□□□ 0.16
TM9SF2Q99805 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
TM9SF2Q99805 TSSK2-201ENST00000399635 1816 ntAPPRIS P1 BASIC16.06■□□□□ 0.16
TM9SF2Q99805 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
TM9SF2Q99805 AC093010.1-201ENST00000473625 1624 ntBASIC16.06■□□□□ 0.16
TM9SF2Q99805 JPH2-202ENST00000372980 4787 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
TM9SF2Q99805 KMT5B-205ENST00000402789 1599 ntTSL 5 BASIC16.06■□□□□ 0.16
TM9SF2Q99805 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
TM9SF2Q99805 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
TM9SF2Q99805 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC16.06■□□□□ 0.16
TM9SF2Q99805 FAM184A-214ENST00000621231 4048 ntTSL 5 BASIC16.06■□□□□ 0.16
TM9SF2Q99805 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
TM9SF2Q99805 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
TM9SF2Q99805 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
TM9SF2Q99805 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC16.06■□□□□ 0.16
TM9SF2Q99805 MTCL1P1-201ENST00000446207 792 ntBASIC16.06■□□□□ 0.16
TM9SF2Q99805 EMBP1-201ENST00000458200 901 ntBASIC16.06■□□□□ 0.16
TM9SF2Q99805 AC091607.1-201ENST00000490318 1060 ntBASIC16.06■□□□□ 0.16
TM9SF2Q99805 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC16.06■□□□□ 0.16
TM9SF2Q99805 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC16.06■□□□□ 0.16
TM9SF2Q99805 AC135586.2-201ENST00000537262 567 ntAPPRIS P1 TSL 4 BASIC16.06■□□□□ 0.16
TM9SF2Q99805 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC16.06■□□□□ 0.16
TM9SF2Q99805 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC16.06■□□□□ 0.16
TM9SF2Q99805 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
TM9SF2Q99805 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
TM9SF2Q99805 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
TM9SF2Q99805 RNF19A-201ENST00000341084 4285 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
TM9SF2Q99805 AL139130.1-201ENST00000451362 5586 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
TM9SF2Q99805 CARNS1-201ENST00000307823 3942 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
TM9SF2Q99805 BAP1-202ENST00000460680 3937 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
TM9SF2Q99805 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
TM9SF2Q99805 MEI1-215ENST00000540833 2326 ntTSL 5 BASIC16.06■□□□□ 0.16
TM9SF2Q99805 ICA1L-201ENST00000358299 3457 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
TM9SF2Q99805 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
TM9SF2Q99805 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC16.06■□□□□ 0.16
TM9SF2Q99805 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC16.06■□□□□ 0.16
TM9SF2Q99805 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
TM9SF2Q99805 TTBK2-208ENST00000622375 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
TM9SF2Q99805 KLF10-201ENST00000285407 3097 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
TM9SF2Q99805 AP000347.2-202ENST00000421064 3041 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
TM9SF2Q99805 VPS37C-201ENST00000301765 2865 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
TM9SF2Q99805 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC16.05■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 29 ms