Protein–RNA interactions for Protein: Q99788

CMKLR1, Chemokine-like receptor 1, humanhuman

Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CMKLR1Q99788 BICD1-207ENST00000551848 1962 ntBASIC16.51■□□□□ 0.23
CMKLR1Q99788 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CMKLR1Q99788 C18orf63-201ENST00000579455 5127 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CMKLR1Q99788 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC16.51■□□□□ 0.23
CMKLR1Q99788 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC16.51■□□□□ 0.23
CMKLR1Q99788 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
CMKLR1Q99788 CACNA1A-253ENST00000637927 6847 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
CMKLR1Q99788 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CMKLR1Q99788 KRT18P55-202ENST00000578578 1546 ntBASIC16.5■□□□□ 0.23
CMKLR1Q99788 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC16.5■□□□□ 0.23
CMKLR1Q99788 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC16.5■□□□□ 0.23
CMKLR1Q99788 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC16.5■□□□□ 0.23
CMKLR1Q99788 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC16.5■□□□□ 0.23
CMKLR1Q99788 RHOBTB1-201ENST00000337910 4473 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CMKLR1Q99788 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
CMKLR1Q99788 MADD-208ENST00000405573 1823 ntTSL 5 BASIC16.5■□□□□ 0.23
CMKLR1Q99788 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC16.5■□□□□ 0.23
CMKLR1Q99788 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC16.5■□□□□ 0.23
CMKLR1Q99788 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
CMKLR1Q99788 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC16.5■□□□□ 0.23
CMKLR1Q99788 ROPN1L-201ENST00000274134 1066 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CMKLR1Q99788 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC16.5■□□□□ 0.23
CMKLR1Q99788 SHF-202ENST00000458022 1163 ntAPPRIS ALT2 TSL 2 BASIC16.5■□□□□ 0.23
CMKLR1Q99788 FAM227B-204ENST00000558594 1139 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
CMKLR1Q99788 LINC02084-201ENST00000606069 1096 ntBASIC16.5■□□□□ 0.23
CMKLR1Q99788 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC16.5■□□□□ 0.23
CMKLR1Q99788 AP5B1-201ENST00000532090 4811 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CMKLR1Q99788 SRRM2-201ENST00000301740 9353 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CMKLR1Q99788 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CMKLR1Q99788 CBLC-202ENST00000341505 1441 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
CMKLR1Q99788 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC16.5■□□□□ 0.23
CMKLR1Q99788 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
CMKLR1Q99788 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC16.5■□□□□ 0.23
CMKLR1Q99788 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CMKLR1Q99788 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CMKLR1Q99788 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
CMKLR1Q99788 TPSAB1-202ENST00000461509 1357 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
CMKLR1Q99788 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC16.5■□□□□ 0.23
CMKLR1Q99788 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CMKLR1Q99788 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC16.49■□□□□ 0.23
CMKLR1Q99788 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CMKLR1Q99788 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
CMKLR1Q99788 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
CMKLR1Q99788 DENND6B-201ENST00000413817 4939 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CMKLR1Q99788 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
CMKLR1Q99788 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CMKLR1Q99788 AL590787.1-201ENST00000568856 1315 ntBASIC16.49■□□□□ 0.23
CMKLR1Q99788 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
CMKLR1Q99788 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
CMKLR1Q99788 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC16.49■□□□□ 0.23
CMKLR1Q99788 WNK1-206ENST00000535572 9886 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
CMKLR1Q99788 NMRK2-201ENST00000168977 1126 ntAPPRIS P3 TSL 2 BASIC16.49■□□□□ 0.23
CMKLR1Q99788 TECR-201ENST00000215567 1171 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CMKLR1Q99788 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
CMKLR1Q99788 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CMKLR1Q99788 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
CMKLR1Q99788 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC16.49■□□□□ 0.23
CMKLR1Q99788 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CMKLR1Q99788 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
CMKLR1Q99788 TWIST2-201ENST00000448943 1176 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CMKLR1Q99788 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC16.49■□□□□ 0.23
CMKLR1Q99788 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CMKLR1Q99788 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC16.49■□□□□ 0.23
CMKLR1Q99788 AC124067.2-201ENST00000521989 510 ntTSL 2 BASIC16.49■□□□□ 0.23
CMKLR1Q99788 RIMS4-202ENST00000541604 1036 ntAPPRIS ALT1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CMKLR1Q99788 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC16.49■□□□□ 0.23
CMKLR1Q99788 ZNF773-202ENST00000593916 548 ntTSL 3 BASIC16.49■□□□□ 0.23
CMKLR1Q99788 AC010619.2-201ENST00000595815 1421 ntTSL 2 BASIC16.49■□□□□ 0.23
CMKLR1Q99788 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
CMKLR1Q99788 AC091812.2-201ENST00000619081 385 ntBASIC16.49■□□□□ 0.23
CMKLR1Q99788 CLN3-255ENST00000637100 1284 ntTSL 5 BASIC16.49■□□□□ 0.23
CMKLR1Q99788 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CMKLR1Q99788 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
CMKLR1Q99788 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CMKLR1Q99788 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC16.49■□□□□ 0.23
CMKLR1Q99788 FLJ13224-201ENST00000313737 1514 ntBASIC16.49■□□□□ 0.23
CMKLR1Q99788 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
CMKLR1Q99788 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CMKLR1Q99788 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
CMKLR1Q99788 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
CMKLR1Q99788 CDCP1-201ENST00000296129 6006 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
CMKLR1Q99788 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC16.48■□□□□ 0.23
CMKLR1Q99788 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
CMKLR1Q99788 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC16.48■□□□□ 0.23
CMKLR1Q99788 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
CMKLR1Q99788 TMEM225B-202ENST00000431679 1314 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
CMKLR1Q99788 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CMKLR1Q99788 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC16.48■□□□□ 0.23
CMKLR1Q99788 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CMKLR1Q99788 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
CMKLR1Q99788 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CMKLR1Q99788 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
CMKLR1Q99788 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CMKLR1Q99788 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CMKLR1Q99788 ENSA-206ENST00000361631 725 ntTSL 2 BASIC16.48■□□□□ 0.23
CMKLR1Q99788 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC16.48■□□□□ 0.23
CMKLR1Q99788 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC16.48■□□□□ 0.23
CMKLR1Q99788 OST4-202ENST00000447619 458 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
CMKLR1Q99788 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC16.48■□□□□ 0.23
CMKLR1Q99788 NDUFS7-216ENST00000546283 1060 ntTSL 2 BASIC16.48■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 29.2 ms