Protein–RNA interactions for Protein: Q99758

ABCA3, ATP-binding cassette sub-family A member 3, humanhuman

Predictions only

Length 1,704 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA3Q99758 CETN4P-206ENST00000642099 2168 ntBASIC22.63■■□□□ 1.21
ABCA3Q99758 DDTL-201ENST00000215770 1545 ntAPPRIS P1 TSL 2 BASIC22.63■■□□□ 1.21
ABCA3Q99758 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
ABCA3Q99758 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC22.63■■□□□ 1.21
ABCA3Q99758 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC22.63■■□□□ 1.21
ABCA3Q99758 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
ABCA3Q99758 CLDN14-204ENST00000399137 1942 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
ABCA3Q99758 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
ABCA3Q99758 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
ABCA3Q99758 LGALS2-201ENST00000215886 591 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
ABCA3Q99758 SNRPB-201ENST00000381342 1154 ntAPPRIS ALT1 TSL 1 (best) BASIC22.62■■□□□ 1.21
ABCA3Q99758 CDK2AP2P3-201ENST00000422476 372 ntBASIC22.62■■□□□ 1.21
ABCA3Q99758 SNRPB-202ENST00000438552 1008 ntAPPRIS P4 TSL 1 (best) BASIC22.62■■□□□ 1.21
ABCA3Q99758 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC22.62■■□□□ 1.21
ABCA3Q99758 EGFEM1P-202ENST00000431685 1563 ntBASIC22.62■■□□□ 1.21
ABCA3Q99758 AC131009.4-201ENST00000624048 1740 ntBASIC22.62■■□□□ 1.21
ABCA3Q99758 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
ABCA3Q99758 CLDN7-203ENST00000538261 1923 ntTSL 5 BASIC22.62■■□□□ 1.21
ABCA3Q99758 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC22.62■■□□□ 1.21
ABCA3Q99758 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC22.62■■□□□ 1.21
ABCA3Q99758 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
ABCA3Q99758 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
ABCA3Q99758 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
ABCA3Q99758 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC22.62■■□□□ 1.21
ABCA3Q99758 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
ABCA3Q99758 USP49-202ENST00000373010 2446 ntTSL 5 BASIC22.62■■□□□ 1.21
ABCA3Q99758 FAM166B-201ENST00000399742 958 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
ABCA3Q99758 AL512384.1-201ENST00000406683 331 ntBASIC22.62■■□□□ 1.21
ABCA3Q99758 AC112492.5-201ENST00000421897 457 ntBASIC22.62■■□□□ 1.21
ABCA3Q99758 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
ABCA3Q99758 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC22.62■■□□□ 1.21
ABCA3Q99758 Z94721.1-201ENST00000444102 385 ntTSL 5 BASIC22.62■■□□□ 1.21
ABCA3Q99758 CALML4-206ENST00000467889 987 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
ABCA3Q99758 DRAP1-208ENST00000532933 751 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
ABCA3Q99758 AC008969.1-205ENST00000553254 876 ntTSL 2 BASIC22.62■■□□□ 1.21
ABCA3Q99758 AL133215.2-201ENST00000609242 977 ntBASIC22.62■■□□□ 1.21
ABCA3Q99758 MIR6805-201ENST00000615055 62 ntBASIC22.62■■□□□ 1.21
ABCA3Q99758 CCNA1-203ENST00000625767 1699 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
ABCA3Q99758 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC22.62■■□□□ 1.21
ABCA3Q99758 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC22.61■■□□□ 1.21
ABCA3Q99758 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC22.61■■□□□ 1.21
ABCA3Q99758 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC22.61■■□□□ 1.21
ABCA3Q99758 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC22.61■■□□□ 1.21
ABCA3Q99758 SRGAP2C-201ENST00000304465 1477 ntTSL 5 BASIC22.61■■□□□ 1.21
ABCA3Q99758 SRGAP2-201ENST00000419187 1477 ntTSL 5 BASIC22.61■■□□□ 1.21
ABCA3Q99758 SRGAP2B-205ENST00000619678 1477 ntTSL 5 BASIC22.61■■□□□ 1.21
ABCA3Q99758 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
ABCA3Q99758 DCTD-213ENST00000510370 794 ntAPPRIS P1 TSL 5 BASIC22.61■■□□□ 1.21
ABCA3Q99758 CSRP2-202ENST00000546966 754 ntAPPRIS P1 TSL 3 BASIC22.61■■□□□ 1.21
ABCA3Q99758 AL512361.1-201ENST00000554200 418 ntBASIC22.61■■□□□ 1.21
ABCA3Q99758 AC105020.3-201ENST00000566036 560 ntTSL 4 BASIC22.61■■□□□ 1.21
ABCA3Q99758 NDUFAB1-205ENST00000570319 885 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
ABCA3Q99758 TMEM205-208ENST00000587948 688 ntAPPRIS P1 TSL 5 BASIC22.61■■□□□ 1.21
ABCA3Q99758 TMEM205-211ENST00000589555 788 ntAPPRIS P1 TSL 2 BASIC22.61■■□□□ 1.21
ABCA3Q99758 ACY1-212ENST00000635797 1294 ntTSL 5 BASIC22.61■■□□□ 1.21
ABCA3Q99758 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
ABCA3Q99758 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
ABCA3Q99758 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC22.61■■□□□ 1.21
ABCA3Q99758 PLEKHA2-208ENST00000616927 1748 ntTSL 5 BASIC22.61■■□□□ 1.21
ABCA3Q99758 AC073957.2-201ENST00000549241 1562 ntTSL 4 BASIC22.61■■□□□ 1.21
ABCA3Q99758 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC22.61■■□□□ 1.21
ABCA3Q99758 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC22.6■■□□□ 1.21
ABCA3Q99758 AC087499.5-201ENST00000452760 1342 ntBASIC22.6■■□□□ 1.21
ABCA3Q99758 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC22.6■■□□□ 1.21
ABCA3Q99758 SCAND1-201ENST00000305978 902 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
ABCA3Q99758 LCN15-201ENST00000316144 762 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
ABCA3Q99758 CLCN6-207ENST00000376497 814 ntTSL 3 BASIC22.6■■□□□ 1.21
ABCA3Q99758 DGCR6-202ENST00000413981 1039 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
ABCA3Q99758 TMEM247-204ENST00000434431 680 ntAPPRIS P1 TSL 5 BASIC22.6■■□□□ 1.21
ABCA3Q99758 SFT2D2-204ENST00000630869 1073 ntTSL 4 BASIC22.6■■□□□ 1.21
ABCA3Q99758 MADD-208ENST00000405573 1823 ntTSL 5 BASIC22.6■■□□□ 1.21
ABCA3Q99758 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
ABCA3Q99758 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
ABCA3Q99758 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
ABCA3Q99758 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC22.6■■□□□ 1.21
ABCA3Q99758 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
ABCA3Q99758 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC22.6■■□□□ 1.21
ABCA3Q99758 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
ABCA3Q99758 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
ABCA3Q99758 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC22.6■■□□□ 1.21
ABCA3Q99758 CTRC-202ENST00000375949 898 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
ABCA3Q99758 FBLN7-204ENST00000409667 1124 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
ABCA3Q99758 PTPRG-AS1-205ENST00000475371 733 ntTSL 3 BASIC22.6■■□□□ 1.21
ABCA3Q99758 AC026471.2-201ENST00000569782 655 ntTSL 2 BASIC22.6■■□□□ 1.21
ABCA3Q99758 SETD7-204ENST00000506866 1602 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
ABCA3Q99758 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC22.59■■□□□ 1.21
ABCA3Q99758 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC22.59■■□□□ 1.21
ABCA3Q99758 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC22.59■■□□□ 1.21
ABCA3Q99758 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
ABCA3Q99758 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
ABCA3Q99758 ACTA1-201ENST00000366683 1122 ntTSL 5 BASIC22.59■■□□□ 1.21
ABCA3Q99758 RPL37AP1-201ENST00000412502 279 ntBASIC22.59■■□□□ 1.21
ABCA3Q99758 BAALC-AS2-201ENST00000436771 496 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
ABCA3Q99758 NEIL2-207ENST00000528323 998 ntTSL 2 BASIC22.59■■□□□ 1.21
ABCA3Q99758 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC22.59■■□□□ 1.21
ABCA3Q99758 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
ABCA3Q99758 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC22.58■■□□□ 1.21
ABCA3Q99758 SLC7A15P-201ENST00000424028 1363 ntBASIC22.58■■□□□ 1.21
ABCA3Q99758 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC22.58■■□□□ 1.21
ABCA3Q99758 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC22.58■■□□□ 1.21
Retrieved 100 of 98,524 protein–RNA pairs in 31.2 ms