Protein–RNA interactions for Protein: Q96PY6

NEK1, Serine/threonine-protein kinase Nek1, humanhuman

Predictions only

Length 1,258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEK1Q96PY6 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
NEK1Q96PY6 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
NEK1Q96PY6 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
NEK1Q96PY6 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
NEK1Q96PY6 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
NEK1Q96PY6 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC20.44■□□□□ 0.86
NEK1Q96PY6 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC20.44■□□□□ 0.86
NEK1Q96PY6 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC20.44■□□□□ 0.86
NEK1Q96PY6 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC20.44■□□□□ 0.86
NEK1Q96PY6 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC20.44■□□□□ 0.86
NEK1Q96PY6 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC20.44■□□□□ 0.86
NEK1Q96PY6 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC20.44■□□□□ 0.86
NEK1Q96PY6 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC20.44■□□□□ 0.86
NEK1Q96PY6 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
NEK1Q96PY6 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC20.44■□□□□ 0.86
NEK1Q96PY6 AL355877.3-201ENST00000622820 899 ntBASIC20.44■□□□□ 0.86
NEK1Q96PY6 NF2-208ENST00000403435 2568 ntTSL 5 BASIC20.44■□□□□ 0.86
NEK1Q96PY6 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
NEK1Q96PY6 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
NEK1Q96PY6 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC20.44■□□□□ 0.86
NEK1Q96PY6 ADO-201ENST00000373783 3627 ntAPPRIS P1 BASIC20.44■□□□□ 0.86
NEK1Q96PY6 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
NEK1Q96PY6 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
NEK1Q96PY6 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
NEK1Q96PY6 ALDH3B1-208ENST00000617288 2078 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
NEK1Q96PY6 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC20.44■□□□□ 0.86
NEK1Q96PY6 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC20.43■□□□□ 0.86
NEK1Q96PY6 UBE3D-203ENST00000369747 1917 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
NEK1Q96PY6 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC20.43■□□□□ 0.86
NEK1Q96PY6 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC20.43■□□□□ 0.86
NEK1Q96PY6 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
NEK1Q96PY6 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC20.43■□□□□ 0.86
NEK1Q96PY6 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
NEK1Q96PY6 SKIDA1-202ENST00000449193 6598 ntAPPRIS P2 TSL 3 BASIC20.43■□□□□ 0.86
NEK1Q96PY6 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
NEK1Q96PY6 AKR1C7P-201ENST00000305623 895 ntBASIC20.43■□□□□ 0.86
NEK1Q96PY6 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
NEK1Q96PY6 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC20.43■□□□□ 0.86
NEK1Q96PY6 LINC00982-205ENST00000420957 435 ntBASIC20.43■□□□□ 0.86
NEK1Q96PY6 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
NEK1Q96PY6 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC20.43■□□□□ 0.86
NEK1Q96PY6 SDHD-206ENST00000528182 754 ntTSL 3 BASIC20.43■□□□□ 0.86
NEK1Q96PY6 AC124947.2-201ENST00000547118 1133 ntBASIC20.43■□□□□ 0.86
NEK1Q96PY6 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC20.43■□□□□ 0.86
NEK1Q96PY6 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
NEK1Q96PY6 REXO1L6P-202ENST00000619970 1078 ntBASIC20.43■□□□□ 0.86
NEK1Q96PY6 ADM5-201ENST00000420022 1718 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
NEK1Q96PY6 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC20.43■□□□□ 0.86
NEK1Q96PY6 GID4-202ENST00000376345 1391 ntTSL 3 BASIC20.43■□□□□ 0.86
NEK1Q96PY6 AGXT-201ENST00000307503 1865 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
NEK1Q96PY6 ADCYAP1R1-203ENST00000409363 1889 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
NEK1Q96PY6 AL356309.3-201ENST00000624132 1934 ntBASIC20.43■□□□□ 0.86
NEK1Q96PY6 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
NEK1Q96PY6 SYTL3-202ENST00000360448 2504 ntAPPRIS ALT1 TSL 5 BASIC20.43■□□□□ 0.86
NEK1Q96PY6 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
NEK1Q96PY6 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
NEK1Q96PY6 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC20.42■□□□□ 0.86
NEK1Q96PY6 LSP1-203ENST00000405957 1785 ntAPPRIS ALT2 TSL 5 BASIC20.42■□□□□ 0.86
NEK1Q96PY6 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
NEK1Q96PY6 MAGI2-AS3-208ENST00000446159 670 ntTSL 3 BASIC20.42■□□□□ 0.86
NEK1Q96PY6 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC20.42■□□□□ 0.86
NEK1Q96PY6 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC20.42■□□□□ 0.86
NEK1Q96PY6 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
NEK1Q96PY6 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC20.42■□□□□ 0.86
NEK1Q96PY6 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC20.42■□□□□ 0.86
NEK1Q96PY6 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC20.42■□□□□ 0.86
NEK1Q96PY6 AL691432.3-201ENST00000621860 400 ntBASIC20.42■□□□□ 0.86
NEK1Q96PY6 AL139288.1-201ENST00000623748 933 ntBASIC20.42■□□□□ 0.86
NEK1Q96PY6 AL022326.1-202ENST00000641533 845 ntBASIC20.42■□□□□ 0.86
NEK1Q96PY6 CACNG5-202ENST00000533854 1311 ntAPPRIS P1 TSL 2 BASIC20.42■□□□□ 0.86
NEK1Q96PY6 PAN3-AS1-201ENST00000563843 1351 ntBASIC20.42■□□□□ 0.86
NEK1Q96PY6 GPR89P-201ENST00000407924 1495 ntBASIC20.42■□□□□ 0.86
NEK1Q96PY6 ZNF773-201ENST00000282292 2206 ntAPPRIS P3 TSL 1 (best) BASIC20.42■□□□□ 0.86
NEK1Q96PY6 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
NEK1Q96PY6 STX3-203ENST00000529177 1571 ntTSL 2 BASIC20.42■□□□□ 0.86
NEK1Q96PY6 DPEP1-203ENST00000421184 1647 ntAPPRIS P1 TSL 5 BASIC20.42■□□□□ 0.86
NEK1Q96PY6 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC20.42■□□□□ 0.86
NEK1Q96PY6 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC20.41■□□□□ 0.86
NEK1Q96PY6 OVOL1-203ENST00000532448 1774 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
NEK1Q96PY6 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC20.41■□□□□ 0.86
NEK1Q96PY6 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC20.41■□□□□ 0.86
NEK1Q96PY6 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
NEK1Q96PY6 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC20.41■□□□□ 0.86
NEK1Q96PY6 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
NEK1Q96PY6 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC20.41■□□□□ 0.86
NEK1Q96PY6 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
NEK1Q96PY6 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
NEK1Q96PY6 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
NEK1Q96PY6 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
NEK1Q96PY6 INSL3-201ENST00000317306 755 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
NEK1Q96PY6 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
NEK1Q96PY6 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
NEK1Q96PY6 FGFR3P6-201ENST00000457012 610 ntBASIC20.41■□□□□ 0.86
NEK1Q96PY6 AC008608.2-201ENST00000606089 416 ntBASIC20.41■□□□□ 0.86
NEK1Q96PY6 AC012366.1-201ENST00000615411 473 ntTSL 5 BASIC20.41■□□□□ 0.86
NEK1Q96PY6 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC20.41■□□□□ 0.86
NEK1Q96PY6 HYAL3-205ENST00000450982 1402 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
NEK1Q96PY6 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC20.41■□□□□ 0.86
NEK1Q96PY6 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
NEK1Q96PY6 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 27.2 ms