Protein–RNA interactions for Protein: Q96B97

SH3KBP1, SH3 domain-containing kinase-binding protein 1, humanhuman

Predictions only

Length 665 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH3KBP1Q96B97 TNKS1BP1-207ENST00000532437 5952 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
SH3KBP1Q96B97 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
SH3KBP1Q96B97 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
SH3KBP1Q96B97 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
SH3KBP1Q96B97 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
SH3KBP1Q96B97 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC17.15■□□□□ 0.34
SH3KBP1Q96B97 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC17.15■□□□□ 0.34
SH3KBP1Q96B97 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC17.15■□□□□ 0.34
SH3KBP1Q96B97 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
SH3KBP1Q96B97 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC17.15■□□□□ 0.34
SH3KBP1Q96B97 AC139887.3-201ENST00000568585 713 ntBASIC17.15■□□□□ 0.34
SH3KBP1Q96B97 GPX4-212ENST00000616066 924 ntAPPRIS ALT1 TSL 5 BASIC17.15■□□□□ 0.34
SH3KBP1Q96B97 AC148477.8-201ENST00000624298 468 ntBASIC17.15■□□□□ 0.34
SH3KBP1Q96B97 ABBA01031661.1-201ENST00000634362 1253 ntBASIC17.15■□□□□ 0.34
SH3KBP1Q96B97 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
SH3KBP1Q96B97 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
SH3KBP1Q96B97 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
SH3KBP1Q96B97 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
SH3KBP1Q96B97 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC17.15■□□□□ 0.34
SH3KBP1Q96B97 CRAMP1-201ENST00000293925 7671 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.34
SH3KBP1Q96B97 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
SH3KBP1Q96B97 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
SH3KBP1Q96B97 AC079776.2-201ENST00000641154 1609 ntBASIC17.14■□□□□ 0.33
SH3KBP1Q96B97 EFCAB14-201ENST00000371933 5767 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
SH3KBP1Q96B97 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
SH3KBP1Q96B97 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC17.14■□□□□ 0.33
SH3KBP1Q96B97 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
SH3KBP1Q96B97 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC17.14■□□□□ 0.33
SH3KBP1Q96B97 JAK3-201ENST00000458235 5432 ntAPPRIS P2 TSL 5 BASIC17.14■□□□□ 0.33
SH3KBP1Q96B97 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC17.14■□□□□ 0.33
SH3KBP1Q96B97 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC17.14■□□□□ 0.33
SH3KBP1Q96B97 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC17.14■□□□□ 0.33
SH3KBP1Q96B97 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC17.14■□□□□ 0.33
SH3KBP1Q96B97 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC17.14■□□□□ 0.33
SH3KBP1Q96B97 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
SH3KBP1Q96B97 SSFA2-201ENST00000320370 4965 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
SH3KBP1Q96B97 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
SH3KBP1Q96B97 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
SH3KBP1Q96B97 OR7E14P-202ENST00000530490 1290 ntBASIC17.14■□□□□ 0.33
SH3KBP1Q96B97 SEC23A-206ENST00000553970 574 ntTSL 4 BASIC17.14■□□□□ 0.33
SH3KBP1Q96B97 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC17.14■□□□□ 0.33
SH3KBP1Q96B97 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC17.14■□□□□ 0.33
SH3KBP1Q96B97 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC17.14■□□□□ 0.33
SH3KBP1Q96B97 NKAPP1-205ENST00000585790 367 ntBASIC17.14■□□□□ 0.33
SH3KBP1Q96B97 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
SH3KBP1Q96B97 FAM215A-202ENST00000632077 792 ntBASIC17.14■□□□□ 0.33
SH3KBP1Q96B97 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC17.14■□□□□ 0.33
SH3KBP1Q96B97 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC17.14■□□□□ 0.33
SH3KBP1Q96B97 AHR-201ENST00000242057 6276 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
SH3KBP1Q96B97 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
SH3KBP1Q96B97 IL9RP2-201ENST00000423948 1312 ntBASIC17.14■□□□□ 0.33
SH3KBP1Q96B97 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
SH3KBP1Q96B97 ACIN1-205ENST00000457657 4815 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
SH3KBP1Q96B97 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
SH3KBP1Q96B97 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SH3KBP1Q96B97 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC17.13■□□□□ 0.33
SH3KBP1Q96B97 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
SH3KBP1Q96B97 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SH3KBP1Q96B97 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
SH3KBP1Q96B97 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SH3KBP1Q96B97 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
SH3KBP1Q96B97 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
SH3KBP1Q96B97 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
SH3KBP1Q96B97 MBNL1-201ENST00000282486 6422 ntAPPRIS P4 TSL 5 BASIC17.13■□□□□ 0.33
SH3KBP1Q96B97 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SH3KBP1Q96B97 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SH3KBP1Q96B97 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC17.13■□□□□ 0.33
SH3KBP1Q96B97 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
SH3KBP1Q96B97 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC17.13■□□□□ 0.33
SH3KBP1Q96B97 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SH3KBP1Q96B97 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SH3KBP1Q96B97 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC17.13■□□□□ 0.33
SH3KBP1Q96B97 INIP-202ENST00000374236 874 ntTSL 2 BASIC17.13■□□□□ 0.33
SH3KBP1Q96B97 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC17.13■□□□□ 0.33
SH3KBP1Q96B97 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
SH3KBP1Q96B97 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC17.13■□□□□ 0.33
SH3KBP1Q96B97 NKTR-203ENST00000442970 646 ntTSL 2 BASIC17.13■□□□□ 0.33
SH3KBP1Q96B97 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
SH3KBP1Q96B97 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC17.13■□□□□ 0.33
SH3KBP1Q96B97 PNMT-203ENST00000581428 677 ntTSL 2 BASIC17.13■□□□□ 0.33
SH3KBP1Q96B97 MTDHP4-201ENST00000600287 670 ntBASIC17.13■□□□□ 0.33
SH3KBP1Q96B97 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
SH3KBP1Q96B97 AL022326.1-202ENST00000641533 845 ntBASIC17.13■□□□□ 0.33
SH3KBP1Q96B97 STK35-201ENST00000381482 6685 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
SH3KBP1Q96B97 PAPLN-202ENST00000340738 5834 ntAPPRIS P2 TSL 5 BASIC17.13■□□□□ 0.33
SH3KBP1Q96B97 AC106820.2-201ENST00000563775 3264 ntBASIC17.13■□□□□ 0.33
SH3KBP1Q96B97 SMARCA4-201ENST00000344626 5392 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
SH3KBP1Q96B97 RUNX2-204ENST00000371438 5698 ntAPPRIS P4 TSL 5 BASIC17.13■□□□□ 0.33
SH3KBP1Q96B97 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
SH3KBP1Q96B97 PKDREJ-201ENST00000253255 7693 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
SH3KBP1Q96B97 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
SH3KBP1Q96B97 NEO1-206ENST00000558964 4441 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
SH3KBP1Q96B97 LINC02381-201ENST00000508564 1369 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
SH3KBP1Q96B97 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SH3KBP1Q96B97 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC17.13■□□□□ 0.33
SH3KBP1Q96B97 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC17.13■□□□□ 0.33
SH3KBP1Q96B97 PRAG1-201ENST00000615670 4903 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
SH3KBP1Q96B97 TRIM9-201ENST00000298355 5284 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SH3KBP1Q96B97 WASF1-202ENST00000359451 3075 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SH3KBP1Q96B97 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC17.12■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 42.2 ms