Protein–RNA interactions for Protein: Q92922

SMARCC1, SWI/SNF complex subunit SMARCC1, humanhuman

Predicted RBP Predictions only

Length 1,105 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1Q92922 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
SMARCC1Q92922 AC087289.5-201ENST00000586076 3175 ntBASIC21.9■■□□□ 1.1
SMARCC1Q92922 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC21.9■■□□□ 1.1
SMARCC1Q92922 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC21.9■■□□□ 1.1
SMARCC1Q92922 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
SMARCC1Q92922 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
SMARCC1Q92922 CAMKV-217ENST00000620470 1485 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
SMARCC1Q92922 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
SMARCC1Q92922 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC21.89■■□□□ 1.1
SMARCC1Q92922 REEP1-208ENST00000538924 1702 ntTSL 5 BASIC21.89■■□□□ 1.1
SMARCC1Q92922 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
SMARCC1Q92922 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC21.89■■□□□ 1.1
SMARCC1Q92922 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC21.89■■□□□ 1.1
SMARCC1Q92922 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC21.89■■□□□ 1.09
SMARCC1Q92922 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC21.89■■□□□ 1.09
SMARCC1Q92922 SLC2A8-201ENST00000373352 914 ntTSL 2 BASIC21.89■■□□□ 1.09
SMARCC1Q92922 GRAP-202ENST00000395635 834 ntTSL 2 BASIC21.89■■□□□ 1.09
SMARCC1Q92922 AC092580.3-201ENST00000430932 139 ntBASIC21.89■■□□□ 1.09
SMARCC1Q92922 IL32-206ENST00000440815 920 ntAPPRIS P4 TSL 2 BASIC21.89■■□□□ 1.09
SMARCC1Q92922 IL32-207ENST00000444393 892 ntAPPRIS P4 TSL 2 BASIC21.89■■□□□ 1.09
SMARCC1Q92922 MTFR1L-218ENST00000526894 733 ntTSL 4 BASIC21.89■■□□□ 1.09
SMARCC1Q92922 IL32-219ENST00000531965 746 ntAPPRIS ALT2 TSL 1 (best) BASIC21.89■■□□□ 1.09
SMARCC1Q92922 AC008750.1-201ENST00000532473 492 ntTSL 3 BASIC21.89■■□□□ 1.09
SMARCC1Q92922 IL32-226ENST00000548476 1014 ntAPPRIS ALT2 TSL 2 BASIC21.89■■□□□ 1.09
SMARCC1Q92922 SECTM1-202ENST00000580437 1030 ntAPPRIS ALT2 TSL 2 BASIC21.89■■□□□ 1.09
SMARCC1Q92922 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
SMARCC1Q92922 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
SMARCC1Q92922 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC21.89■■□□□ 1.09
SMARCC1Q92922 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC21.89■■□□□ 1.09
SMARCC1Q92922 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
SMARCC1Q92922 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC21.89■■□□□ 1.09
SMARCC1Q92922 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
SMARCC1Q92922 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC21.89■■□□□ 1.09
SMARCC1Q92922 TBXAS1-202ENST00000411653 1792 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
SMARCC1Q92922 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC21.89■■□□□ 1.09
SMARCC1Q92922 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC21.89■■□□□ 1.09
SMARCC1Q92922 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
SMARCC1Q92922 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
SMARCC1Q92922 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
SMARCC1Q92922 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC21.88■■□□□ 1.09
SMARCC1Q92922 CLEC17A-202ENST00000417570 1399 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
SMARCC1Q92922 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
SMARCC1Q92922 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC21.88■■□□□ 1.09
SMARCC1Q92922 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
SMARCC1Q92922 MCC-208ENST00000514701 2855 ntTSL 2 BASIC21.88■■□□□ 1.09
SMARCC1Q92922 ERCC1-201ENST00000013807 1278 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
SMARCC1Q92922 FAM159B-201ENST00000389074 847 ntAPPRIS P1 TSL 2 BASIC21.88■■□□□ 1.09
SMARCC1Q92922 INS-205ENST00000512523 297 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
SMARCC1Q92922 CR383656.12-201ENST00000549567 513 ntBASIC21.88■■□□□ 1.09
SMARCC1Q92922 AC027307.2-201ENST00000591252 911 ntBASIC21.88■■□□□ 1.09
SMARCC1Q92922 AC020934.3-201ENST00000639810 348 ntAPPRIS P1 TSL 3 BASIC21.88■■□□□ 1.09
SMARCC1Q92922 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC21.88■■□□□ 1.09
SMARCC1Q92922 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC21.88■■□□□ 1.09
SMARCC1Q92922 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
SMARCC1Q92922 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
SMARCC1Q92922 FAM153A-203ENST00000440605 1966 ntAPPRIS P2 TSL 1 (best) BASIC21.88■■□□□ 1.09
SMARCC1Q92922 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC21.88■■□□□ 1.09
SMARCC1Q92922 ANXA4-202ENST00000409920 1414 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
SMARCC1Q92922 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
SMARCC1Q92922 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC21.88■■□□□ 1.09
SMARCC1Q92922 AZI2-205ENST00000420543 1366 ntTSL 3 BASIC21.87■■□□□ 1.09
SMARCC1Q92922 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC21.87■■□□□ 1.09
SMARCC1Q92922 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC21.87■■□□□ 1.09
SMARCC1Q92922 NAPA-AS1-201ENST00000593284 1753 ntTSL 2 BASIC21.87■■□□□ 1.09
SMARCC1Q92922 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
SMARCC1Q92922 SARDH-202ENST00000371867 1326 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
SMARCC1Q92922 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
SMARCC1Q92922 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
SMARCC1Q92922 C11orf71-201ENST00000325636 652 ntAPPRIS P3 TSL 1 (best) BASIC21.87■■□□□ 1.09
SMARCC1Q92922 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC21.87■■□□□ 1.09
SMARCC1Q92922 CACNB2-206ENST00000377328 1233 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
SMARCC1Q92922 ZC3H12D-202ENST00000409948 753 ntTSL 3 BASIC21.87■■□□□ 1.09
SMARCC1Q92922 RPUSD3-204ENST00000424438 1005 ntTSL 2 BASIC21.87■■□□□ 1.09
SMARCC1Q92922 AC241585.1-201ENST00000433527 519 ntBASIC21.87■■□□□ 1.09
SMARCC1Q92922 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC21.87■■□□□ 1.09
SMARCC1Q92922 MTRF1LP2-201ENST00000506027 1122 ntBASIC21.87■■□□□ 1.09
SMARCC1Q92922 AC136475.3-203ENST00000525217 617 ntTSL 2 BASIC21.87■■□□□ 1.09
SMARCC1Q92922 PTHLH-207ENST00000539239 890 ntAPPRIS ALT1 TSL 5 BASIC21.87■■□□□ 1.09
SMARCC1Q92922 AL133467.1-201ENST00000554161 993 ntTSL 2 BASIC21.87■■□□□ 1.09
SMARCC1Q92922 MIR3909-201ENST00000579518 119 ntBASIC21.87■■□□□ 1.09
SMARCC1Q92922 COQ4-205ENST00000609948 956 ntTSL 2 BASIC21.87■■□□□ 1.09
SMARCC1Q92922 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC21.87■■□□□ 1.09
SMARCC1Q92922 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC21.87■■□□□ 1.09
SMARCC1Q92922 HLA-DQB1-201ENST00000374943 1656 ntBASIC21.87■■□□□ 1.09
SMARCC1Q92922 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
SMARCC1Q92922 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC21.87■■□□□ 1.09
SMARCC1Q92922 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC21.87■■□□□ 1.09
SMARCC1Q92922 TIA1-206ENST00000445587 1440 ntTSL 5 BASIC21.87■■□□□ 1.09
SMARCC1Q92922 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC21.87■■□□□ 1.09
SMARCC1Q92922 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
SMARCC1Q92922 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
SMARCC1Q92922 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC21.87■■□□□ 1.09
SMARCC1Q92922 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC21.87■■□□□ 1.09
SMARCC1Q92922 ACP5-203ENST00000433365 1397 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
SMARCC1Q92922 UBE3D-203ENST00000369747 1917 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
SMARCC1Q92922 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC21.86■■□□□ 1.09
SMARCC1Q92922 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC21.86■■□□□ 1.09
SMARCC1Q92922 F10-202ENST00000375559 1517 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
SMARCC1Q92922 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
SMARCC1Q92922 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Retrieved 100 of 98,524 protein–RNA pairs in 56 ms