Protein–RNA interactions for Protein: Q92854

SEMA4D, Semaphorin-4D, humanhuman

Predictions only

Length 862 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4DQ92854 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
SEMA4DQ92854 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
SEMA4DQ92854 THAP8-201ENST00000292894 1825 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
SEMA4DQ92854 GPR89P-201ENST00000407924 1495 ntBASIC18.54■□□□□ 0.56
SEMA4DQ92854 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
SEMA4DQ92854 KLHDC8B-201ENST00000332780 1959 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
SEMA4DQ92854 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
SEMA4DQ92854 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
SEMA4DQ92854 HIST2H3DP1-201ENST00000401004 416 ntBASIC18.54■□□□□ 0.56
SEMA4DQ92854 HNRNPDP1-201ENST00000439535 754 ntBASIC18.54■□□□□ 0.56
SEMA4DQ92854 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC18.54■□□□□ 0.56
SEMA4DQ92854 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC18.54■□□□□ 0.56
SEMA4DQ92854 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC18.54■□□□□ 0.56
SEMA4DQ92854 PNMT-203ENST00000581428 677 ntTSL 2 BASIC18.54■□□□□ 0.56
SEMA4DQ92854 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC18.54■□□□□ 0.56
SEMA4DQ92854 AC104692.2-201ENST00000603054 253 ntBASIC18.54■□□□□ 0.56
SEMA4DQ92854 ANO2-212ENST00000612575 1087 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
SEMA4DQ92854 AL589182.2-201ENST00000619332 1049 ntBASIC18.54■□□□□ 0.56
SEMA4DQ92854 AC148477.8-201ENST00000624298 468 ntBASIC18.54■□□□□ 0.56
SEMA4DQ92854 VPS51-217ENST00000639871 243 ntTSL 5 BASIC18.54■□□□□ 0.56
SEMA4DQ92854 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC18.54■□□□□ 0.56
SEMA4DQ92854 AD000864.1-201ENST00000624076 2295 ntBASIC18.54■□□□□ 0.56
SEMA4DQ92854 NCF1C-201ENST00000438382 1427 ntBASIC18.54■□□□□ 0.56
SEMA4DQ92854 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
SEMA4DQ92854 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC18.54■□□□□ 0.56
SEMA4DQ92854 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC18.54■□□□□ 0.56
SEMA4DQ92854 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
SEMA4DQ92854 AD000671.3-202ENST00000591091 1712 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
SEMA4DQ92854 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC18.54■□□□□ 0.56
SEMA4DQ92854 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
SEMA4DQ92854 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
SEMA4DQ92854 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC18.53■□□□□ 0.56
SEMA4DQ92854 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
SEMA4DQ92854 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC18.53■□□□□ 0.56
SEMA4DQ92854 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
SEMA4DQ92854 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
SEMA4DQ92854 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
SEMA4DQ92854 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
SEMA4DQ92854 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
SEMA4DQ92854 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
SEMA4DQ92854 GOSR2-202ENST00000393456 788 ntTSL 3 BASIC18.53■□□□□ 0.56
SEMA4DQ92854 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
SEMA4DQ92854 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC18.53■□□□□ 0.56
SEMA4DQ92854 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
SEMA4DQ92854 ADCYAP1R1-203ENST00000409363 1889 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
SEMA4DQ92854 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
SEMA4DQ92854 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC18.53■□□□□ 0.56
SEMA4DQ92854 RPS2P1-201ENST00000434010 821 ntBASIC18.53■□□□□ 0.56
SEMA4DQ92854 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC18.53■□□□□ 0.56
SEMA4DQ92854 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC18.53■□□□□ 0.56
SEMA4DQ92854 RNPS1P1-201ENST00000507437 918 ntBASIC18.53■□□□□ 0.56
SEMA4DQ92854 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC18.53■□□□□ 0.56
SEMA4DQ92854 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
SEMA4DQ92854 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC18.53■□□□□ 0.56
SEMA4DQ92854 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC18.53■□□□□ 0.56
SEMA4DQ92854 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC18.53■□□□□ 0.56
SEMA4DQ92854 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
SEMA4DQ92854 TTLL10-201ENST00000379288 2114 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
SEMA4DQ92854 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
SEMA4DQ92854 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
SEMA4DQ92854 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC18.53■□□□□ 0.56
SEMA4DQ92854 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC18.53■□□□□ 0.56
SEMA4DQ92854 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
SEMA4DQ92854 AC009053.2-201ENST00000563701 2365 ntBASIC18.53■□□□□ 0.56
SEMA4DQ92854 ZNF773-201ENST00000282292 2206 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
SEMA4DQ92854 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC18.53■□□□□ 0.56
SEMA4DQ92854 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC18.53■□□□□ 0.56
SEMA4DQ92854 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
SEMA4DQ92854 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.56
SEMA4DQ92854 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
SEMA4DQ92854 C18orf8-201ENST00000269221 2162 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
SEMA4DQ92854 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
SEMA4DQ92854 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
SEMA4DQ92854 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
SEMA4DQ92854 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
SEMA4DQ92854 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
SEMA4DQ92854 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.56
SEMA4DQ92854 TMTC4-203ENST00000376234 3483 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
SEMA4DQ92854 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC18.52■□□□□ 0.56
SEMA4DQ92854 SLC18B1-201ENST00000275227 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
SEMA4DQ92854 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
SEMA4DQ92854 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.56
SEMA4DQ92854 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
SEMA4DQ92854 ADAM22-202ENST00000398201 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
SEMA4DQ92854 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
SEMA4DQ92854 RAB17-203ENST00000409576 466 ntTSL 3 BASIC18.52■□□□□ 0.56
SEMA4DQ92854 MAGI2-AS3-208ENST00000446159 670 ntTSL 3 BASIC18.52■□□□□ 0.56
SEMA4DQ92854 FAM197Y8-203ENST00000450145 560 ntBASIC18.52■□□□□ 0.56
SEMA4DQ92854 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC18.52■□□□□ 0.56
SEMA4DQ92854 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.56
SEMA4DQ92854 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC18.52■□□□□ 0.56
SEMA4DQ92854 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC18.52■□□□□ 0.56
SEMA4DQ92854 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC18.52■□□□□ 0.56
SEMA4DQ92854 AC139887.3-201ENST00000568585 713 ntBASIC18.52■□□□□ 0.56
SEMA4DQ92854 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.56
SEMA4DQ92854 AL139424.1-201ENST00000607572 797 ntBASIC18.52■□□□□ 0.56
SEMA4DQ92854 AC004706.3-202ENST00000621574 984 ntBASIC18.52■□□□□ 0.56
SEMA4DQ92854 HNRNPRP1-201ENST00000453465 1695 ntBASIC18.52■□□□□ 0.56
SEMA4DQ92854 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
SEMA4DQ92854 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC18.52■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 211.2 ms