Protein–RNA interactions for Protein: Q92738

USP6NL, USP6 N-terminal-like protein, humanhuman

Predictions only

Length 828 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NLQ92738 AC108010.1-201ENST00000605862 1107 ntTSL 5 BASIC19.45■□□□□ 0.7
USP6NLQ92738 AL035252.4-201ENST00000624174 288 ntBASIC19.45■□□□□ 0.7
USP6NLQ92738 OARD1-216ENST00000628419 1188 ntTSL 5 BASIC19.45■□□□□ 0.7
USP6NLQ92738 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
USP6NLQ92738 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC19.45■□□□□ 0.7
USP6NLQ92738 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC19.45■□□□□ 0.7
USP6NLQ92738 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC19.45■□□□□ 0.7
USP6NLQ92738 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC19.45■□□□□ 0.7
USP6NLQ92738 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
USP6NLQ92738 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
USP6NLQ92738 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
USP6NLQ92738 PDHX-203ENST00000448838 2653 ntTSL 5 BASIC19.45■□□□□ 0.7
USP6NLQ92738 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
USP6NLQ92738 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
USP6NLQ92738 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
USP6NLQ92738 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
USP6NLQ92738 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
USP6NLQ92738 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
USP6NLQ92738 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
USP6NLQ92738 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
USP6NLQ92738 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC19.44■□□□□ 0.7
USP6NLQ92738 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
USP6NLQ92738 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
USP6NLQ92738 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
USP6NLQ92738 HPSE-207ENST00000513463 1458 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
USP6NLQ92738 MRNIP-201ENST00000292586 1238 ntAPPRIS P4 TSL 1 (best) BASIC19.44■□□□□ 0.7
USP6NLQ92738 MRPL43-201ENST00000299179 747 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
USP6NLQ92738 HMGA1P7-201ENST00000406908 502 ntBASIC19.44■□□□□ 0.7
USP6NLQ92738 PLAC9P1-202ENST00000433290 400 ntTSL 2 BASIC19.44■□□□□ 0.7
USP6NLQ92738 CCDC159-201ENST00000458408 1062 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
USP6NLQ92738 AC139713.2-206ENST00000499587 566 ntTSL 4 BASIC19.44■□□□□ 0.7
USP6NLQ92738 POLD4-211ENST00000539074 714 ntTSL 3 BASIC19.44■□□□□ 0.7
USP6NLQ92738 AC027088.1-201ENST00000557966 1117 ntTSL 2 BASIC19.44■□□□□ 0.7
USP6NLQ92738 AC099482.1-201ENST00000563471 481 ntTSL 2 BASIC19.44■□□□□ 0.7
USP6NLQ92738 AC104985.1-201ENST00000587528 507 ntTSL 3 BASIC19.44■□□□□ 0.7
USP6NLQ92738 YTHDF3-AS1-201ENST00000603538 718 ntBASIC19.44■□□□□ 0.7
USP6NLQ92738 AL139327.4-201ENST00000612362 153 ntBASIC19.44■□□□□ 0.7
USP6NLQ92738 LRRC42-201ENST00000319223 1727 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
USP6NLQ92738 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
USP6NLQ92738 HLA-F-218ENST00000376861 1544 ntAPPRIS ALT2 BASIC19.44■□□□□ 0.7
USP6NLQ92738 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC19.44■□□□□ 0.7
USP6NLQ92738 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
USP6NLQ92738 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
USP6NLQ92738 ZDHHC11-209ENST00000511539 1303 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
USP6NLQ92738 ZDHHC11B-204ENST00000622126 1301 ntTSL 5 BASIC19.44■□□□□ 0.7
USP6NLQ92738 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC19.44■□□□□ 0.7
USP6NLQ92738 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC19.44■□□□□ 0.7
USP6NLQ92738 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
USP6NLQ92738 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
USP6NLQ92738 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC19.44■□□□□ 0.7
USP6NLQ92738 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC19.43■□□□□ 0.7
USP6NLQ92738 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
USP6NLQ92738 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
USP6NLQ92738 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
USP6NLQ92738 OCIAD1-213ENST00000508293 1423 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
USP6NLQ92738 CLN3-229ENST00000567963 1452 ntTSL 5 BASIC19.43■□□□□ 0.7
USP6NLQ92738 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC19.43■□□□□ 0.7
USP6NLQ92738 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC19.43■□□□□ 0.7
USP6NLQ92738 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC19.43■□□□□ 0.7
USP6NLQ92738 VMA21-202ENST00000370361 693 ntTSL 5 BASIC19.43■□□□□ 0.7
USP6NLQ92738 BX276092.7-202ENST00000422194 696 ntTSL 3 BASIC19.43■□□□□ 0.7
USP6NLQ92738 AC005034.1-201ENST00000426657 489 ntBASIC19.43■□□□□ 0.7
USP6NLQ92738 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
USP6NLQ92738 AC067852.1-201ENST00000585572 594 ntTSL 4 BASIC19.43■□□□□ 0.7
USP6NLQ92738 ZNF667-AS1-204ENST00000588158 921 ntTSL 3 BASIC19.43■□□□□ 0.7
USP6NLQ92738 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
USP6NLQ92738 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC19.43■□□□□ 0.7
USP6NLQ92738 AC063926.2-201ENST00000623766 1308 ntBASIC19.43■□□□□ 0.7
USP6NLQ92738 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
USP6NLQ92738 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC19.43■□□□□ 0.7
USP6NLQ92738 HYAL3-207ENST00000621157 1696 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
USP6NLQ92738 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
USP6NLQ92738 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC19.42■□□□□ 0.7
USP6NLQ92738 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC19.42■□□□□ 0.7
USP6NLQ92738 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
USP6NLQ92738 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC19.42■□□□□ 0.7
USP6NLQ92738 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
USP6NLQ92738 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
USP6NLQ92738 CENPM-205ENST00000404067 905 ntTSL 3 BASIC19.42■□□□□ 0.7
USP6NLQ92738 AC107890.1-201ENST00000422478 521 ntBASIC19.42■□□□□ 0.7
USP6NLQ92738 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
USP6NLQ92738 AL513327.2-201ENST00000432703 490 ntTSL 2 BASIC19.42■□□□□ 0.7
USP6NLQ92738 RBPMS2P1-201ENST00000437762 623 ntBASIC19.42■□□□□ 0.7
USP6NLQ92738 TERF1P3-201ENST00000505638 1227 ntBASIC19.42■□□□□ 0.7
USP6NLQ92738 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC19.42■□□□□ 0.7
USP6NLQ92738 PUDP-206ENST00000540122 825 ntTSL 2 BASIC19.42■□□□□ 0.7
USP6NLQ92738 CERNA1-201ENST00000559779 908 ntTSL 3 BASIC19.42■□□□□ 0.7
USP6NLQ92738 AC009053.3-201ENST00000567148 574 ntTSL 4 BASIC19.42■□□□□ 0.7
USP6NLQ92738 AC243571.2-201ENST00000615265 628 ntTSL 3 BASIC19.42■□□□□ 0.7
USP6NLQ92738 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
USP6NLQ92738 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
USP6NLQ92738 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
USP6NLQ92738 ZDHHC19-201ENST00000296326 1306 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
USP6NLQ92738 CORO1A-208ENST00000565497 1348 ntTSL 5 BASIC19.42■□□□□ 0.7
USP6NLQ92738 ADCY1-202ENST00000432715 1693 ntTSL 2 BASIC19.42■□□□□ 0.7
USP6NLQ92738 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
USP6NLQ92738 AC009113.1-201ENST00000570267 2443 ntBASIC19.42■□□□□ 0.7
USP6NLQ92738 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC19.42■□□□□ 0.7
USP6NLQ92738 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
USP6NLQ92738 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 46.7 ms