Protein–RNA interactions for Protein: Q92544

TM9SF4, Transmembrane 9 superfamily member 4, humanhuman

Predictions only

Length 642 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF4Q92544 GRM5-203ENST00000393294 1268 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
TM9SF4Q92544 AC007967.3-201ENST00000434308 558 ntBASIC16.34■□□□□ 0.21
TM9SF4Q92544 KRT18P3-201ENST00000451602 1288 ntBASIC16.34■□□□□ 0.21
TM9SF4Q92544 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
TM9SF4Q92544 RNA5SP416-201ENST00000516838 111 ntBASIC16.34■□□□□ 0.21
TM9SF4Q92544 RNA5SP415-201ENST00000517246 115 ntBASIC16.34■□□□□ 0.21
TM9SF4Q92544 RPS29-206ENST00000557111 488 ntTSL 2 BASIC16.34■□□□□ 0.21
TM9SF4Q92544 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
TM9SF4Q92544 AC040169.1-201ENST00000565382 521 ntBASIC16.34■□□□□ 0.21
TM9SF4Q92544 RNF151-202ENST00000569210 853 ntTSL 2 BASIC16.34■□□□□ 0.21
TM9SF4Q92544 MIR3687-2-201ENST00000577708 61 ntBASIC16.34■□□□□ 0.21
TM9SF4Q92544 AC006557.2-201ENST00000592985 1240 ntBASIC16.34■□□□□ 0.21
TM9SF4Q92544 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
TM9SF4Q92544 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC16.34■□□□□ 0.21
TM9SF4Q92544 MIR3687-1-201ENST00000614492 61 ntBASIC16.34■□□□□ 0.21
TM9SF4Q92544 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC16.34■□□□□ 0.21
TM9SF4Q92544 AL022326.1-202ENST00000641533 845 ntBASIC16.34■□□□□ 0.21
TM9SF4Q92544 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC16.34■□□□□ 0.21
TM9SF4Q92544 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
TM9SF4Q92544 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC16.34■□□□□ 0.21
TM9SF4Q92544 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
TM9SF4Q92544 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
TM9SF4Q92544 ADO-201ENST00000373783 3627 ntAPPRIS P1 BASIC16.34■□□□□ 0.21
TM9SF4Q92544 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
TM9SF4Q92544 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
TM9SF4Q92544 PKD1P1-201ENST00000458669 6805 ntBASIC16.34■□□□□ 0.21
TM9SF4Q92544 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC16.34■□□□□ 0.21
TM9SF4Q92544 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC16.34■□□□□ 0.21
TM9SF4Q92544 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC16.34■□□□□ 0.21
TM9SF4Q92544 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
TM9SF4Q92544 HASPIN-201ENST00000325418 2797 ntAPPRIS P1 BASIC16.33■□□□□ 0.21
TM9SF4Q92544 FAM208A-209ENST00000493960 5600 ntAPPRIS P2 TSL 5 BASIC16.33■□□□□ 0.21
TM9SF4Q92544 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC16.33■□□□□ 0.21
TM9SF4Q92544 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.21
TM9SF4Q92544 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC16.33■□□□□ 0.21
TM9SF4Q92544 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
TM9SF4Q92544 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC16.33■□□□□ 0.21
TM9SF4Q92544 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
TM9SF4Q92544 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
TM9SF4Q92544 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
TM9SF4Q92544 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
TM9SF4Q92544 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
TM9SF4Q92544 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
TM9SF4Q92544 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
TM9SF4Q92544 TBC1D4-202ENST00000377636 6364 ntAPPRIS P3 TSL 2 BASIC16.33■□□□□ 0.2
TM9SF4Q92544 LBH-204ENST00000406087 559 ntTSL 4 BASIC16.33■□□□□ 0.2
TM9SF4Q92544 HS6ST1P1-201ENST00000481504 1234 ntBASIC16.33■□□□□ 0.2
TM9SF4Q92544 AC122714.2-201ENST00000502787 707 ntBASIC16.33■□□□□ 0.2
TM9SF4Q92544 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC16.33■□□□□ 0.2
TM9SF4Q92544 PAM16-208ENST00000573553 722 ntTSL 2 BASIC16.33■□□□□ 0.2
TM9SF4Q92544 AL356488.2-201ENST00000602755 427 ntBASIC16.33■□□□□ 0.2
TM9SF4Q92544 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC16.33■□□□□ 0.2
TM9SF4Q92544 AC079781.4-201ENST00000641908 219 ntBASIC16.33■□□□□ 0.2
TM9SF4Q92544 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC16.33■□□□□ 0.2
TM9SF4Q92544 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
TM9SF4Q92544 SLC8A3-203ENST00000357887 5259 ntTSL 5 BASIC16.33■□□□□ 0.2
TM9SF4Q92544 SLC8A3-204ENST00000381269 5268 ntAPPRIS ALT1 TSL 1 (best) BASIC16.33■□□□□ 0.2
TM9SF4Q92544 AL162311.3-201ENST00000555918 2867 ntTSL 2 BASIC16.33■□□□□ 0.2
TM9SF4Q92544 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
TM9SF4Q92544 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
TM9SF4Q92544 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
TM9SF4Q92544 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC16.33■□□□□ 0.2
TM9SF4Q92544 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
TM9SF4Q92544 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
TM9SF4Q92544 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
TM9SF4Q92544 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
TM9SF4Q92544 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
TM9SF4Q92544 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
TM9SF4Q92544 ZGLP1-202ENST00000403903 2303 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
TM9SF4Q92544 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC16.33■□□□□ 0.2
TM9SF4Q92544 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
TM9SF4Q92544 RBCK1-202ENST00000356286 2774 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
TM9SF4Q92544 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
TM9SF4Q92544 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
TM9SF4Q92544 MOB3A-201ENST00000357066 3391 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
TM9SF4Q92544 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
TM9SF4Q92544 NOMO1-208ENST00000620755 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
TM9SF4Q92544 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
TM9SF4Q92544 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC16.32■□□□□ 0.2
TM9SF4Q92544 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
TM9SF4Q92544 SAMD11-202ENST00000342066 2551 ntAPPRIS P2 TSL 5 BASIC16.32■□□□□ 0.2
TM9SF4Q92544 TRIM24-201ENST00000343526 8410 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
TM9SF4Q92544 DPM3-203ENST00000368400 409 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
TM9SF4Q92544 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
TM9SF4Q92544 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
TM9SF4Q92544 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
TM9SF4Q92544 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
TM9SF4Q92544 MOB1B-202ENST00000396051 1107 ntTSL 2 BASIC16.32■□□□□ 0.2
TM9SF4Q92544 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC16.32■□□□□ 0.2
TM9SF4Q92544 AC103564.2-201ENST00000432853 1299 ntBASIC16.32■□□□□ 0.2
TM9SF4Q92544 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC16.32■□□□□ 0.2
TM9SF4Q92544 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
TM9SF4Q92544 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC16.32■□□□□ 0.2
TM9SF4Q92544 MNT-208ENST00000575394 606 ntTSL 4 BASIC16.32■□□□□ 0.2
TM9SF4Q92544 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
TM9SF4Q92544 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
TM9SF4Q92544 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC16.32■□□□□ 0.2
TM9SF4Q92544 SELENOM-210ENST00000611680 689 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
TM9SF4Q92544 AC243773.2-203ENST00000612281 640 ntTSL 3 BASIC16.32■□□□□ 0.2
TM9SF4Q92544 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 26.7 ms