Protein–RNA interactions for Protein: Q8WVD3

RNF138, E3 ubiquitin-protein ligase RNF138, humanhuman

Predictions only

Length 245 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF138Q8WVD3 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC15.51■□□□□ 0.07
RNF138Q8WVD3 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC15.51■□□□□ 0.07
RNF138Q8WVD3 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC15.51■□□□□ 0.07
RNF138Q8WVD3 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC15.51■□□□□ 0.07
RNF138Q8WVD3 AC091167.2-201ENST00000579581 588 ntBASIC15.51■□□□□ 0.07
RNF138Q8WVD3 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC15.51■□□□□ 0.07
RNF138Q8WVD3 CYB561-216ENST00000582297 897 ntTSL 3 BASIC15.51■□□□□ 0.07
RNF138Q8WVD3 WDR88-203ENST00000592765 651 ntTSL 5 BASIC15.51■□□□□ 0.07
RNF138Q8WVD3 AC140113.2-201ENST00000604370 208 ntBASIC15.51■□□□□ 0.07
RNF138Q8WVD3 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC15.51■□□□□ 0.07
RNF138Q8WVD3 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
RNF138Q8WVD3 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC15.51■□□□□ 0.07
RNF138Q8WVD3 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
RNF138Q8WVD3 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
RNF138Q8WVD3 AL132857.2-201ENST00000634305 1737 ntTSL 5 BASIC15.51■□□□□ 0.07
RNF138Q8WVD3 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
RNF138Q8WVD3 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
RNF138Q8WVD3 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
RNF138Q8WVD3 MYC-202ENST00000377970 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
RNF138Q8WVD3 AL121761.2-201ENST00000598007 1648 ntBASIC15.5■□□□□ 0.07
RNF138Q8WVD3 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC15.5■□□□□ 0.07
RNF138Q8WVD3 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC15.5■□□□□ 0.07
RNF138Q8WVD3 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC15.5■□□□□ 0.07
RNF138Q8WVD3 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC15.5■□□□□ 0.07
RNF138Q8WVD3 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
RNF138Q8WVD3 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
RNF138Q8WVD3 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC15.5■□□□□ 0.07
RNF138Q8WVD3 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
RNF138Q8WVD3 ETV3L-201ENST00000454449 1976 ntAPPRIS P1 TSL 2 BASIC15.5■□□□□ 0.07
RNF138Q8WVD3 STX10-201ENST00000242770 1099 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
RNF138Q8WVD3 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
RNF138Q8WVD3 PMS2P1-201ENST00000431037 1228 ntBASIC15.5■□□□□ 0.07
RNF138Q8WVD3 KRT18P2-201ENST00000447938 1258 ntBASIC15.5■□□□□ 0.07
RNF138Q8WVD3 CXCL1P1-201ENST00000502804 216 ntBASIC15.5■□□□□ 0.07
RNF138Q8WVD3 PGAM5P1-201ENST00000518923 814 ntBASIC15.5■□□□□ 0.07
RNF138Q8WVD3 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC15.5■□□□□ 0.07
RNF138Q8WVD3 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC15.5■□□□□ 0.07
RNF138Q8WVD3 AC005412.3-201ENST00000580309 715 ntBASIC15.5■□□□□ 0.07
RNF138Q8WVD3 MIR4492-201ENST00000581627 80 ntBASIC15.5■□□□□ 0.07
RNF138Q8WVD3 STX10-204ENST00000587230 1136 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
RNF138Q8WVD3 AC013467.2-201ENST00000605472 835 ntBASIC15.5■□□□□ 0.07
RNF138Q8WVD3 BSG-214ENST00000614867 960 ntTSL 3 BASIC15.5■□□□□ 0.07
RNF138Q8WVD3 AC010507.1-201ENST00000633895 436 ntBASIC15.5■□□□□ 0.07
RNF138Q8WVD3 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC15.5■□□□□ 0.07
RNF138Q8WVD3 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC15.5■□□□□ 0.07
RNF138Q8WVD3 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
RNF138Q8WVD3 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
RNF138Q8WVD3 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC15.5■□□□□ 0.07
RNF138Q8WVD3 ZNF264-202ENST00000536056 2078 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
RNF138Q8WVD3 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC15.5■□□□□ 0.07
RNF138Q8WVD3 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
RNF138Q8WVD3 BSG-203ENST00000353555 1616 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
RNF138Q8WVD3 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC15.5■□□□□ 0.07
RNF138Q8WVD3 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
RNF138Q8WVD3 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
RNF138Q8WVD3 IL4I1-204ENST00000595948 2407 ntAPPRIS P4 TSL 1 (best) BASIC15.49■□□□□ 0.07
RNF138Q8WVD3 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC15.49■□□□□ 0.07
RNF138Q8WVD3 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC15.49■□□□□ 0.07
RNF138Q8WVD3 AC026471.1-201ENST00000564629 3026 ntBASIC15.49■□□□□ 0.07
RNF138Q8WVD3 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
RNF138Q8WVD3 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC15.49■□□□□ 0.07
RNF138Q8WVD3 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
RNF138Q8WVD3 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
RNF138Q8WVD3 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
RNF138Q8WVD3 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
RNF138Q8WVD3 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC15.49■□□□□ 0.07
RNF138Q8WVD3 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
RNF138Q8WVD3 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC15.49■□□□□ 0.07
RNF138Q8WVD3 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
RNF138Q8WVD3 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
RNF138Q8WVD3 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC15.49■□□□□ 0.07
RNF138Q8WVD3 SELENOH-201ENST00000388857 833 ntAPPRIS P2 TSL 1 (best) BASIC15.49■□□□□ 0.07
RNF138Q8WVD3 C6orf226-201ENST00000408925 552 ntAPPRIS P1 BASIC15.49■□□□□ 0.07
RNF138Q8WVD3 BX890604.1-208ENST00000490920 726 ntTSL 2 BASIC15.49■□□□□ 0.07
RNF138Q8WVD3 MIR130B-201ENST00000498589 1093 ntTSL 5 BASIC15.49■□□□□ 0.07
RNF138Q8WVD3 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC15.49■□□□□ 0.07
RNF138Q8WVD3 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC15.49■□□□□ 0.07
RNF138Q8WVD3 KRT18P58-201ENST00000527480 1120 ntBASIC15.49■□□□□ 0.07
RNF138Q8WVD3 TPD52L1-211ENST00000532429 1022 ntTSL 2 BASIC15.49■□□□□ 0.07
RNF138Q8WVD3 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC15.49■□□□□ 0.07
RNF138Q8WVD3 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC15.49■□□□□ 0.07
RNF138Q8WVD3 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC15.49■□□□□ 0.07
RNF138Q8WVD3 AC107896.1-201ENST00000593212 548 ntTSL 4 BASIC15.49■□□□□ 0.07
RNF138Q8WVD3 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC15.49■□□□□ 0.07
RNF138Q8WVD3 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC15.49■□□□□ 0.07
RNF138Q8WVD3 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC15.49■□□□□ 0.07
RNF138Q8WVD3 AC092068.3-201ENST00000587894 2016 ntBASIC15.49■□□□□ 0.07
RNF138Q8WVD3 BCRP2-201ENST00000398241 1842 ntTSL 2 BASIC15.49■□□□□ 0.07
RNF138Q8WVD3 LINC00895-201ENST00000629028 1637 ntBASIC15.49■□□□□ 0.07
RNF138Q8WVD3 ARHGEF4-206ENST00000428230 2172 ntTSL 5 BASIC15.49■□□□□ 0.07
RNF138Q8WVD3 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
RNF138Q8WVD3 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
RNF138Q8WVD3 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
RNF138Q8WVD3 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC15.49■□□□□ 0.07
RNF138Q8WVD3 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
RNF138Q8WVD3 IL12RB1-201ENST00000322153 1902 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
RNF138Q8WVD3 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
RNF138Q8WVD3 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC15.48■□□□□ 0.07
RNF138Q8WVD3 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
RNF138Q8WVD3 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 26.5 ms