Protein–RNA interactions for Protein: Q8N7R7

CCNYL1, Cyclin-Y-like protein 1, humanhuman

Predictions only

Length 359 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNYL1Q8N7R7 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC17.09■□□□□ 0.33
CCNYL1Q8N7R7 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CCNYL1Q8N7R7 NUS1-201ENST00000368494 4676 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CCNYL1Q8N7R7 TRIM45-203ENST00000369464 3495 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CCNYL1Q8N7R7 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC17.09■□□□□ 0.33
CCNYL1Q8N7R7 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CCNYL1Q8N7R7 SLC5A2-201ENST00000330498 2271 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CCNYL1Q8N7R7 TOM1-210ENST00000449058 2389 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
CCNYL1Q8N7R7 PAK4-203ENST00000360442 2855 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
CCNYL1Q8N7R7 RIMS1-210ENST00000491071 5047 ntTSL 5 BASIC17.09■□□□□ 0.33
CCNYL1Q8N7R7 ACE-204ENST00000428043 5120 ntTSL 2 BASIC17.09■□□□□ 0.33
CCNYL1Q8N7R7 MIB2-217ENST00000504599 3311 ntAPPRIS ALT2 TSL 2 BASIC17.09■□□□□ 0.33
CCNYL1Q8N7R7 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CCNYL1Q8N7R7 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CCNYL1Q8N7R7 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CCNYL1Q8N7R7 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
CCNYL1Q8N7R7 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
CCNYL1Q8N7R7 SLC25A1P3-201ENST00000395415 828 ntBASIC17.09■□□□□ 0.33
CCNYL1Q8N7R7 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CCNYL1Q8N7R7 HOMER2P1-201ENST00000455653 964 ntBASIC17.09■□□□□ 0.33
CCNYL1Q8N7R7 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CCNYL1Q8N7R7 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC17.09■□□□□ 0.33
CCNYL1Q8N7R7 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC17.09■□□□□ 0.33
CCNYL1Q8N7R7 AC109462.3-201ENST00000573934 613 ntBASIC17.09■□□□□ 0.33
CCNYL1Q8N7R7 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC17.09■□□□□ 0.33
CCNYL1Q8N7R7 AC066615.1-201ENST00000640911 628 ntBASIC17.09■□□□□ 0.33
CCNYL1Q8N7R7 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
CCNYL1Q8N7R7 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CCNYL1Q8N7R7 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
CCNYL1Q8N7R7 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CCNYL1Q8N7R7 ZSCAN25-201ENST00000262941 1652 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CCNYL1Q8N7R7 OS9-205ENST00000413095 1660 ntTSL 2 BASIC17.09■□□□□ 0.33
CCNYL1Q8N7R7 TAPBP-238ENST00000475304 1686 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
CCNYL1Q8N7R7 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CCNYL1Q8N7R7 MOCS1-206ENST00000425303 1920 ntTSL 2 BASIC17.09■□□□□ 0.33
CCNYL1Q8N7R7 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CCNYL1Q8N7R7 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC17.09■□□□□ 0.33
CCNYL1Q8N7R7 FAM227A-201ENST00000355830 2417 ntAPPRIS P5 TSL 5 BASIC17.09■□□□□ 0.33
CCNYL1Q8N7R7 STUM-201ENST00000366788 7705 ntAPPRIS P2 TSL 5 BASIC17.09■□□□□ 0.33
CCNYL1Q8N7R7 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
CCNYL1Q8N7R7 RAB35-201ENST00000229340 2945 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CCNYL1Q8N7R7 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
CCNYL1Q8N7R7 KIFC2-201ENST00000301332 3646 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CCNYL1Q8N7R7 SEMA4B-202ENST00000411539 3807 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CCNYL1Q8N7R7 PELP1-208ENST00000572293 5272 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.33
CCNYL1Q8N7R7 ZFP28-201ENST00000301318 4096 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
CCNYL1Q8N7R7 BMI1-201ENST00000376663 3428 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
CCNYL1Q8N7R7 NIPA2-201ENST00000337451 3233 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.33
CCNYL1Q8N7R7 WASF1-202ENST00000359451 3075 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
CCNYL1Q8N7R7 PKDREJ-201ENST00000253255 7693 ntAPPRIS P1 BASIC17.08■□□□□ 0.33
CCNYL1Q8N7R7 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
CCNYL1Q8N7R7 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
CCNYL1Q8N7R7 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
CCNYL1Q8N7R7 KCNJ8-201ENST00000240662 2389 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
CCNYL1Q8N7R7 ZNF414-202ENST00000393927 2300 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
CCNYL1Q8N7R7 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC17.08■□□□□ 0.33
CCNYL1Q8N7R7 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
CCNYL1Q8N7R7 AP1S2-201ENST00000329235 2237 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
CCNYL1Q8N7R7 ARHGEF25-208ENST00000616622 2103 ntTSL 2 BASIC17.08■□□□□ 0.33
CCNYL1Q8N7R7 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC17.08■□□□□ 0.33
CCNYL1Q8N7R7 WBP2-201ENST00000254806 1944 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.33
CCNYL1Q8N7R7 CLDN7-203ENST00000538261 1923 ntTSL 5 BASIC17.08■□□□□ 0.33
CCNYL1Q8N7R7 MLLT10-203ENST00000377072 5126 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
CCNYL1Q8N7R7 CACNA1G-202ENST00000354983 8138 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
CCNYL1Q8N7R7 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC17.08■□□□□ 0.32
CCNYL1Q8N7R7 MAP2K5-202ENST00000340972 1491 ntTSL 2 BASIC17.08■□□□□ 0.32
CCNYL1Q8N7R7 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
CCNYL1Q8N7R7 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CCNYL1Q8N7R7 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.32
CCNYL1Q8N7R7 UBC-206ENST00000538617 1303 ntTSL 5 BASIC17.08■□□□□ 0.32
CCNYL1Q8N7R7 ELANE-201ENST00000263621 920 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CCNYL1Q8N7R7 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CCNYL1Q8N7R7 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CCNYL1Q8N7R7 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CCNYL1Q8N7R7 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
CCNYL1Q8N7R7 MYCLP1-201ENST00000372451 1075 ntBASIC17.08■□□□□ 0.32
CCNYL1Q8N7R7 AC005521.1-201ENST00000393351 872 ntBASIC17.08■□□□□ 0.32
CCNYL1Q8N7R7 GOSR2-202ENST00000393456 788 ntTSL 3 BASIC17.08■□□□□ 0.32
CCNYL1Q8N7R7 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC17.08■□□□□ 0.32
CCNYL1Q8N7R7 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
CCNYL1Q8N7R7 KRT18P57-201ENST00000443599 1254 ntBASIC17.08■□□□□ 0.32
CCNYL1Q8N7R7 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC17.08■□□□□ 0.32
CCNYL1Q8N7R7 ULK4P3-205ENST00000568486 1158 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
CCNYL1Q8N7R7 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC17.08■□□□□ 0.32
CCNYL1Q8N7R7 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC17.08■□□□□ 0.32
CCNYL1Q8N7R7 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC17.08■□□□□ 0.32
CCNYL1Q8N7R7 ELAVL2-208ENST00000544538 3789 ntAPPRIS P3 TSL 5 BASIC17.08■□□□□ 0.32
CCNYL1Q8N7R7 PRKAR2B-201ENST00000265717 3745 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CCNYL1Q8N7R7 SLC39A8-201ENST00000356736 3144 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CCNYL1Q8N7R7 KLF10-201ENST00000285407 3097 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CCNYL1Q8N7R7 F11R-206ENST00000621309 4770 ntTSL 5 BASIC17.08■□□□□ 0.32
CCNYL1Q8N7R7 AGTPBP1-201ENST00000337006 4473 ntTSL 5 BASIC17.08■□□□□ 0.32
CCNYL1Q8N7R7 BACE1-211ENST00000528053 4083 ntTSL 5 BASIC17.08■□□□□ 0.32
CCNYL1Q8N7R7 RGPD8-201ENST00000302558 5576 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
CCNYL1Q8N7R7 PRRX1-202ENST00000367760 2217 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
CCNYL1Q8N7R7 GABRB3-215ENST00000622697 5876 ntTSL 5 BASIC17.08■□□□□ 0.32
CCNYL1Q8N7R7 TNKS1BP1-201ENST00000358252 5795 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
CCNYL1Q8N7R7 C2orf81-202ENST00000612891 1902 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
CCNYL1Q8N7R7 SYT6-201ENST00000369547 4369 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
CCNYL1Q8N7R7 RASGRP2-206ENST00000377494 2983 ntAPPRIS ALT1 TSL 2 BASIC17.07■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 27.9 ms