Protein–RNA interactions for Protein: Q8IX30

SCUBE3, Signal peptide, CUB and EGF-like domain-containing protein 3, humanhuman

Predictions only

Length 993 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCUBE3Q8IX30 ANAPC2-201ENST00000323927 2632 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
SCUBE3Q8IX30 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
SCUBE3Q8IX30 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
SCUBE3Q8IX30 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
SCUBE3Q8IX30 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC18.16■□□□□ 0.5
SCUBE3Q8IX30 OR7E14P-202ENST00000530490 1290 ntBASIC18.16■□□□□ 0.5
SCUBE3Q8IX30 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC18.16■□□□□ 0.5
SCUBE3Q8IX30 AC008481.3-201ENST00000585656 727 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
SCUBE3Q8IX30 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
SCUBE3Q8IX30 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
SCUBE3Q8IX30 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
SCUBE3Q8IX30 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
SCUBE3Q8IX30 IGSF8-201ENST00000314485 2343 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
SCUBE3Q8IX30 AP001094.4-201ENST00000579008 2176 ntBASIC18.15■□□□□ 0.5
SCUBE3Q8IX30 CHRM2-201ENST00000320658 1694 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
SCUBE3Q8IX30 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
SCUBE3Q8IX30 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
SCUBE3Q8IX30 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
SCUBE3Q8IX30 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC18.15■□□□□ 0.5
SCUBE3Q8IX30 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC18.15■□□□□ 0.5
SCUBE3Q8IX30 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
SCUBE3Q8IX30 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
SCUBE3Q8IX30 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
SCUBE3Q8IX30 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC18.15■□□□□ 0.5
SCUBE3Q8IX30 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC18.15■□□□□ 0.5
SCUBE3Q8IX30 PBK-201ENST00000301905 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
SCUBE3Q8IX30 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
SCUBE3Q8IX30 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
SCUBE3Q8IX30 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC18.15■□□□□ 0.5
SCUBE3Q8IX30 ATP5L2-201ENST00000505920 799 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
SCUBE3Q8IX30 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC18.15■□□□□ 0.5
SCUBE3Q8IX30 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
SCUBE3Q8IX30 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC18.15■□□□□ 0.5
SCUBE3Q8IX30 SLC25A6P4-201ENST00000586535 553 ntBASIC18.15■□□□□ 0.5
SCUBE3Q8IX30 CYGB-205ENST00000590175 830 ntTSL 3 BASIC18.15■□□□□ 0.5
SCUBE3Q8IX30 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC18.15■□□□□ 0.5
SCUBE3Q8IX30 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
SCUBE3Q8IX30 PTHLH-205ENST00000535992 1891 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
SCUBE3Q8IX30 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
SCUBE3Q8IX30 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
SCUBE3Q8IX30 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
SCUBE3Q8IX30 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
SCUBE3Q8IX30 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC18.15■□□□□ 0.5
SCUBE3Q8IX30 TAPBP-238ENST00000475304 1686 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
SCUBE3Q8IX30 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC18.15■□□□□ 0.5
SCUBE3Q8IX30 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
SCUBE3Q8IX30 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC18.15■□□□□ 0.5
SCUBE3Q8IX30 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
SCUBE3Q8IX30 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
SCUBE3Q8IX30 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC18.14■□□□□ 0.5
SCUBE3Q8IX30 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC18.14■□□□□ 0.5
SCUBE3Q8IX30 LRCH2-201ENST00000317135 4929 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
SCUBE3Q8IX30 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.49
SCUBE3Q8IX30 RHBDF1P1-201ENST00000427504 1941 ntBASIC18.14■□□□□ 0.49
SCUBE3Q8IX30 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
SCUBE3Q8IX30 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
SCUBE3Q8IX30 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
SCUBE3Q8IX30 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC18.14■□□□□ 0.49
SCUBE3Q8IX30 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
SCUBE3Q8IX30 PPIE-208ENST00000470213 927 ntTSL 3 BASIC18.14■□□□□ 0.49
SCUBE3Q8IX30 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC18.14■□□□□ 0.49
SCUBE3Q8IX30 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC18.14■□□□□ 0.49
SCUBE3Q8IX30 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC18.14■□□□□ 0.49
SCUBE3Q8IX30 AC012640.2-201ENST00000561606 901 ntBASIC18.14■□□□□ 0.49
SCUBE3Q8IX30 AL353135.1-201ENST00000606729 504 ntBASIC18.14■□□□□ 0.49
SCUBE3Q8IX30 AL773604.1-201ENST00000617417 272 ntBASIC18.14■□□□□ 0.49
SCUBE3Q8IX30 AC004706.3-202ENST00000621574 984 ntBASIC18.14■□□□□ 0.49
SCUBE3Q8IX30 ISG15-203ENST00000624697 788 ntAPPRIS ALT2 TSL 3 BASIC18.14■□□□□ 0.49
SCUBE3Q8IX30 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC18.14■□□□□ 0.49
SCUBE3Q8IX30 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
SCUBE3Q8IX30 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
SCUBE3Q8IX30 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
SCUBE3Q8IX30 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
SCUBE3Q8IX30 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
SCUBE3Q8IX30 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
SCUBE3Q8IX30 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC18.14■□□□□ 0.49
SCUBE3Q8IX30 ASIC2-201ENST00000225823 3443 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
SCUBE3Q8IX30 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
SCUBE3Q8IX30 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
SCUBE3Q8IX30 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC18.14■□□□□ 0.49
SCUBE3Q8IX30 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
SCUBE3Q8IX30 CHRNA7-207ENST00000635884 1975 ntTSL 5 BASIC18.13■□□□□ 0.49
SCUBE3Q8IX30 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
SCUBE3Q8IX30 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC18.13■□□□□ 0.49
SCUBE3Q8IX30 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
SCUBE3Q8IX30 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC18.13■□□□□ 0.49
SCUBE3Q8IX30 LTB4R2-202ENST00000528054 3092 ntBASIC18.13■□□□□ 0.49
SCUBE3Q8IX30 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC18.13■□□□□ 0.49
SCUBE3Q8IX30 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
SCUBE3Q8IX30 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
SCUBE3Q8IX30 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
SCUBE3Q8IX30 AL031284.1-201ENST00000419297 478 ntBASIC18.13■□□□□ 0.49
SCUBE3Q8IX30 LAGE3P1-201ENST00000425356 484 ntBASIC18.13■□□□□ 0.49
SCUBE3Q8IX30 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC18.13■□□□□ 0.49
SCUBE3Q8IX30 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC18.13■□□□□ 0.49
SCUBE3Q8IX30 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC18.13■□□□□ 0.49
SCUBE3Q8IX30 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC18.13■□□□□ 0.49
SCUBE3Q8IX30 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC18.13■□□□□ 0.49
SCUBE3Q8IX30 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC18.13■□□□□ 0.49
SCUBE3Q8IX30 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC18.13■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 46.8 ms