Protein–RNA interactions for Protein: Q86UQ8

NFE4, Transcription factor NF-E4, humanhuman

Predictions only

Length 179 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NFE4Q86UQ8 TOM1-210ENST00000449058 2389 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
NFE4Q86UQ8 TNKS1BP1-201ENST00000358252 5795 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
NFE4Q86UQ8 PPP1R3B-202ENST00000519699 2334 ntAPPRIS P1 TSL 2 BASIC12.43□□□□□ -0.42
NFE4Q86UQ8 B3GNT4-206ENST00000546192 2749 ntAPPRIS P1 TSL 2 BASIC12.43□□□□□ -0.42
NFE4Q86UQ8 STAT5A-201ENST00000345506 4301 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
NFE4Q86UQ8 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC12.43□□□□□ -0.42
NFE4Q86UQ8 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
NFE4Q86UQ8 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
NFE4Q86UQ8 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC12.43□□□□□ -0.42
NFE4Q86UQ8 HBZP1-201ENST00000354915 429 ntBASIC12.43□□□□□ -0.42
NFE4Q86UQ8 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC12.43□□□□□ -0.42
NFE4Q86UQ8 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
NFE4Q86UQ8 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC12.43□□□□□ -0.42
NFE4Q86UQ8 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC12.43□□□□□ -0.42
NFE4Q86UQ8 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC12.43□□□□□ -0.42
NFE4Q86UQ8 DUTP2-201ENST00000519164 463 ntBASIC12.43□□□□□ -0.42
NFE4Q86UQ8 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC12.43□□□□□ -0.42
NFE4Q86UQ8 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
NFE4Q86UQ8 AC010240.3-201ENST00000607688 395 ntBASIC12.43□□□□□ -0.42
NFE4Q86UQ8 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC12.43□□□□□ -0.42
NFE4Q86UQ8 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC12.43□□□□□ -0.42
NFE4Q86UQ8 AC116407.4-201ENST00000623319 1061 ntBASIC12.43□□□□□ -0.42
NFE4Q86UQ8 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
NFE4Q86UQ8 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
NFE4Q86UQ8 IQCE-217ENST00000623361 6775 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
NFE4Q86UQ8 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
NFE4Q86UQ8 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC12.43□□□□□ -0.42
NFE4Q86UQ8 FAM184B-201ENST00000265018 6622 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
NFE4Q86UQ8 ZMIZ1-201ENST00000334512 7546 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
NFE4Q86UQ8 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
NFE4Q86UQ8 PCDHA13-202ENST00000409494 4884 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
NFE4Q86UQ8 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
NFE4Q86UQ8 MYB-201ENST00000316528 3571 ntTSL 5 BASIC12.43□□□□□ -0.42
NFE4Q86UQ8 CHMP1A-201ENST00000397901 2483 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
NFE4Q86UQ8 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC12.43□□□□□ -0.42
NFE4Q86UQ8 MYB-241ENST00000616088 3573 ntTSL 5 BASIC12.43□□□□□ -0.42
NFE4Q86UQ8 RBM6-210ENST00000442092 2260 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
NFE4Q86UQ8 ELMO3-203ENST00000477898 2281 ntAPPRIS ALT2 TSL 2 BASIC12.42□□□□□ -0.42
NFE4Q86UQ8 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC12.42□□□□□ -0.42
NFE4Q86UQ8 PLEKHA4-202ENST00000355496 2614 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
NFE4Q86UQ8 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC12.42□□□□□ -0.42
NFE4Q86UQ8 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
NFE4Q86UQ8 LAT2-201ENST00000275635 1869 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
NFE4Q86UQ8 SLC39A8-201ENST00000356736 3144 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
NFE4Q86UQ8 PDE4C-202ENST00000355502 5979 ntAPPRIS P3 TSL 2 BASIC12.42□□□□□ -0.42
NFE4Q86UQ8 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC12.42□□□□□ -0.42
NFE4Q86UQ8 SLC34A1-201ENST00000324417 2573 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
NFE4Q86UQ8 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
NFE4Q86UQ8 REPS1-208ENST00000450536 4537 ntAPPRIS ALT1 TSL 1 (best) BASIC12.42□□□□□ -0.42
NFE4Q86UQ8 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC12.42□□□□□ -0.42
NFE4Q86UQ8 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC12.42□□□□□ -0.42
NFE4Q86UQ8 DDX1-201ENST00000233084 2739 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
NFE4Q86UQ8 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
NFE4Q86UQ8 PLEKHN1-201ENST00000379407 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
NFE4Q86UQ8 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
NFE4Q86UQ8 MAP2K5-202ENST00000340972 1491 ntTSL 2 BASIC12.42□□□□□ -0.42
NFE4Q86UQ8 SLC2A6-201ENST00000371897 2301 ntTSL 2 BASIC12.42□□□□□ -0.42
NFE4Q86UQ8 ADD1-201ENST00000264758 4045 ntAPPRIS P3 TSL 5 BASIC12.42□□□□□ -0.42
NFE4Q86UQ8 MAN2A2-216ENST00000559717 6704 ntAPPRIS P1 TSL 2 BASIC12.42□□□□□ -0.42
NFE4Q86UQ8 PHRF1-201ENST00000264555 5523 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
NFE4Q86UQ8 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
NFE4Q86UQ8 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
NFE4Q86UQ8 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
NFE4Q86UQ8 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC12.42□□□□□ -0.42
NFE4Q86UQ8 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC12.42□□□□□ -0.42
NFE4Q86UQ8 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC12.42□□□□□ -0.42
NFE4Q86UQ8 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
NFE4Q86UQ8 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC12.42□□□□□ -0.42
NFE4Q86UQ8 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC12.42□□□□□ -0.42
NFE4Q86UQ8 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC12.42□□□□□ -0.42
NFE4Q86UQ8 RAB6A-207ENST00000541588 758 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
NFE4Q86UQ8 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC12.42□□□□□ -0.42
NFE4Q86UQ8 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC12.42□□□□□ -0.42
NFE4Q86UQ8 NAA38-203ENST00000575071 553 ntTSL 2 BASIC12.42□□□□□ -0.42
NFE4Q86UQ8 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC12.42□□□□□ -0.42
NFE4Q86UQ8 AL136038.4-201ENST00000603606 1261 ntBASIC12.42□□□□□ -0.42
NFE4Q86UQ8 AC083849.1-201ENST00000615227 514 ntBASIC12.42□□□□□ -0.42
NFE4Q86UQ8 ASAH1-201ENST00000262097 2618 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
NFE4Q86UQ8 SLC4A5-203ENST00000377632 3123 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
NFE4Q86UQ8 GRAMD2B-217ENST00000515200 3109 ntTSL 5 BASIC12.42□□□□□ -0.42
NFE4Q86UQ8 PAPD5-202ENST00000436909 4635 ntAPPRIS P1 TSL 2 BASIC12.42□□□□□ -0.42
NFE4Q86UQ8 SLC12A9-201ENST00000354161 3273 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
NFE4Q86UQ8 INPP4A-202ENST00000409016 9996 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
NFE4Q86UQ8 PPFIA3-201ENST00000334186 4733 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
NFE4Q86UQ8 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
NFE4Q86UQ8 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC12.42□□□□□ -0.42
NFE4Q86UQ8 TTYH2-206ENST00000529107 2015 ntTSL 2 BASIC12.42□□□□□ -0.42
NFE4Q86UQ8 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
NFE4Q86UQ8 AL163051.1-201ENST00000569214 1512 ntBASIC12.42□□□□□ -0.42
NFE4Q86UQ8 C20orf166-AS1-201ENST00000412495 2302 ntTSL 2 BASIC12.42□□□□□ -0.42
NFE4Q86UQ8 GLUD2-201ENST00000328078 2493 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
NFE4Q86UQ8 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
NFE4Q86UQ8 VAV2-201ENST00000371850 4837 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
NFE4Q86UQ8 CCDC120-202ENST00000496529 2415 ntAPPRIS P3 TSL 2 BASIC12.41□□□□□ -0.42
NFE4Q86UQ8 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC12.41□□□□□ -0.42
NFE4Q86UQ8 TYSND1-201ENST00000287078 3644 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
NFE4Q86UQ8 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
NFE4Q86UQ8 ZNF30-202ENST00000439785 2651 ntAPPRIS P4 TSL 5 BASIC12.41□□□□□ -0.42
NFE4Q86UQ8 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC12.41□□□□□ -0.42
NFE4Q86UQ8 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC12.41□□□□□ -0.42
Retrieved 100 of 98,524 protein–RNA pairs in 33.8 ms