Protein–RNA interactions for Protein: Q70EL3

USP50, Inactive ubiquitin carboxyl-terminal hydrolase 50, humanhuman

Predicted RBP Predictions only

Length 339 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP50Q70EL3 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC20.13■□□□□ 0.81
USP50Q70EL3 REEP1-208ENST00000538924 1702 ntTSL 5 BASIC20.13■□□□□ 0.81
USP50Q70EL3 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
USP50Q70EL3 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC20.13■□□□□ 0.81
USP50Q70EL3 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC20.12■□□□□ 0.81
USP50Q70EL3 DTD2-202ENST00000356180 1400 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
USP50Q70EL3 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC20.12■□□□□ 0.81
USP50Q70EL3 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
USP50Q70EL3 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC20.12■□□□□ 0.81
USP50Q70EL3 SS18L2-201ENST00000011691 781 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
USP50Q70EL3 HDAC8-203ENST00000373559 632 ntTSL 2 BASIC20.12■□□□□ 0.81
USP50Q70EL3 HDAC8-208ENST00000373583 434 ntTSL 5 BASIC20.12■□□□□ 0.81
USP50Q70EL3 AL353597.1-201ENST00000414875 998 ntTSL 5 BASIC20.12■□□□□ 0.81
USP50Q70EL3 AP006294.1-201ENST00000415407 339 ntBASIC20.12■□□□□ 0.81
USP50Q70EL3 DLX2-AS1-201ENST00000448117 950 ntTSL 5 BASIC20.12■□□□□ 0.81
USP50Q70EL3 RN7SL752P-201ENST00000463779 287 ntBASIC20.12■□□□□ 0.81
USP50Q70EL3 AP001995.1-201ENST00000531784 1157 ntTSL 4 BASIC20.12■□□□□ 0.81
USP50Q70EL3 NAA38-206ENST00000576384 424 ntTSL 2 BASIC20.12■□□□□ 0.81
USP50Q70EL3 AC016727.1-204ENST00000578974 420 ntTSL 3 BASIC20.12■□□□□ 0.81
USP50Q70EL3 AL844908.2-201ENST00000609461 460 ntBASIC20.12■□□□□ 0.81
USP50Q70EL3 TEX28P1-201ENST00000613479 1221 ntBASIC20.12■□□□□ 0.81
USP50Q70EL3 TEX28P2-201ENST00000617764 1221 ntBASIC20.12■□□□□ 0.81
USP50Q70EL3 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC20.12■□□□□ 0.81
USP50Q70EL3 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC20.12■□□□□ 0.81
USP50Q70EL3 SRPK3-201ENST00000370100 1717 ntAPPRIS ALT2 TSL 5 BASIC20.12■□□□□ 0.81
USP50Q70EL3 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
USP50Q70EL3 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
USP50Q70EL3 REXO1L9P-201ENST00000604264 2108 ntBASIC20.12■□□□□ 0.81
USP50Q70EL3 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
USP50Q70EL3 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
USP50Q70EL3 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
USP50Q70EL3 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC20.12■□□□□ 0.81
USP50Q70EL3 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC20.12■□□□□ 0.81
USP50Q70EL3 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
USP50Q70EL3 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
USP50Q70EL3 HFE2-205ENST00000497365 1419 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
USP50Q70EL3 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
USP50Q70EL3 BCL2L2-PABPN1-203ENST00000557008 1366 ntAPPRIS P1 TSL 5 BASIC20.11■□□□□ 0.81
USP50Q70EL3 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
USP50Q70EL3 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
USP50Q70EL3 ETV2-205ENST00000479824 1342 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
USP50Q70EL3 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
USP50Q70EL3 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC20.11■□□□□ 0.81
USP50Q70EL3 STK4-201ENST00000372801 2038 ntTSL 2 BASIC20.11■□□□□ 0.81
USP50Q70EL3 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
USP50Q70EL3 IDH3B-202ENST00000380851 1230 ntAPPRIS ALT1 TSL 1 (best) BASIC20.11■□□□□ 0.81
USP50Q70EL3 ASMT-201ENST00000381229 1087 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
USP50Q70EL3 MAGEC1-202ENST00000406005 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
USP50Q70EL3 AC008278.1-201ENST00000431117 568 ntTSL 4 BASIC20.11■□□□□ 0.81
USP50Q70EL3 C8orf46-205ENST00000480005 865 ntTSL 2 BASIC20.11■□□□□ 0.81
USP50Q70EL3 ARL6IP1-202ENST00000546206 1107 ntTSL 2 BASIC20.11■□□□□ 0.81
USP50Q70EL3 MAPKAPK5-203ENST00000547305 494 ntTSL 2 BASIC20.11■□□□□ 0.81
USP50Q70EL3 AC091167.2-201ENST00000579581 588 ntBASIC20.11■□□□□ 0.81
USP50Q70EL3 TRAPPC6A-204ENST00000588062 695 ntTSL 2 BASIC20.11■□□□□ 0.81
USP50Q70EL3 AC073389.1-201ENST00000595595 795 ntBASIC20.11■□□□□ 0.81
USP50Q70EL3 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
USP50Q70EL3 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC20.11■□□□□ 0.81
USP50Q70EL3 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
USP50Q70EL3 ANKRD2-203ENST00000370655 1451 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
USP50Q70EL3 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
USP50Q70EL3 TBXAS1-202ENST00000411653 1792 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
USP50Q70EL3 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
USP50Q70EL3 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC20.1■□□□□ 0.81
USP50Q70EL3 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
USP50Q70EL3 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC20.1■□□□□ 0.81
USP50Q70EL3 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
USP50Q70EL3 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC20.1■□□□□ 0.81
USP50Q70EL3 AL391825.1-201ENST00000457671 1364 ntBASIC20.1■□□□□ 0.81
USP50Q70EL3 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC20.1■□□□□ 0.81
USP50Q70EL3 ACTA1-201ENST00000366683 1122 ntTSL 5 BASIC20.1■□□□□ 0.81
USP50Q70EL3 SNRPB-201ENST00000381342 1154 ntAPPRIS ALT1 TSL 1 (best) BASIC20.1■□□□□ 0.81
USP50Q70EL3 NPM2-202ENST00000381530 925 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
USP50Q70EL3 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC20.1■□□□□ 0.81
USP50Q70EL3 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC20.1■□□□□ 0.81
USP50Q70EL3 AL451069.2-201ENST00000428814 297 ntTSL 3 BASIC20.1■□□□□ 0.81
USP50Q70EL3 DFFBP1-201ENST00000433250 979 ntBASIC20.1■□□□□ 0.81
USP50Q70EL3 LCN10-203ENST00000474369 564 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
USP50Q70EL3 AC011495.1-201ENST00000498085 584 ntBASIC20.1■□□□□ 0.81
USP50Q70EL3 RPL10P19-202ENST00000520582 722 ntTSL 3 BASIC20.1■□□□□ 0.81
USP50Q70EL3 AP001107.2-202ENST00000528650 480 ntTSL 3 BASIC20.1■□□□□ 0.81
USP50Q70EL3 AC008969.1-205ENST00000553254 876 ntTSL 2 BASIC20.1■□□□□ 0.81
USP50Q70EL3 RNA5-8SN1-201ENST00000610460 153 ntBASIC20.1■□□□□ 0.81
USP50Q70EL3 RNA5-8SN5-202ENST00000612463 153 ntBASIC20.1■□□□□ 0.81
USP50Q70EL3 RNA5-8SN4-201ENST00000613359 153 ntBASIC20.1■□□□□ 0.81
USP50Q70EL3 RNA5-8SN5-201ENST00000619471 153 ntBASIC20.1■□□□□ 0.81
USP50Q70EL3 CFAP77-201ENST00000343036 1818 ntAPPRIS P3 TSL 2 BASIC20.1■□□□□ 0.81
USP50Q70EL3 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC20.1■□□□□ 0.81
USP50Q70EL3 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC20.1■□□□□ 0.81
USP50Q70EL3 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
USP50Q70EL3 TEAD2-203ENST00000539846 1444 ntTSL 2 BASIC20.1■□□□□ 0.81
USP50Q70EL3 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
USP50Q70EL3 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
USP50Q70EL3 UBAP1L-201ENST00000502113 1381 ntAPPRIS P1 TSL 5 BASIC20.09■□□□□ 0.81
USP50Q70EL3 EIF5A-206ENST00000571955 1366 ntAPPRIS P1 TSL 5 BASIC20.09■□□□□ 0.81
USP50Q70EL3 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC20.09■□□□□ 0.81
USP50Q70EL3 RABEPK-201ENST00000259460 1313 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
USP50Q70EL3 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC20.09■□□□□ 0.81
USP50Q70EL3 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC20.09■□□□□ 0.81
USP50Q70EL3 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC20.09■□□□□ 0.81
USP50Q70EL3 DDTL-201ENST00000215770 1545 ntAPPRIS P1 TSL 2 BASIC20.09■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 54.3 ms