Protein–RNA interactions for Protein: Q6ZMN7

PDZRN4, PDZ domain-containing RING finger protein 4, humanhuman

Predicted RBP Predictions only

Length 1,036 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN4Q6ZMN7 SASH3-201ENST00000356892 2626 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
PDZRN4Q6ZMN7 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
PDZRN4Q6ZMN7 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC19.93■□□□□ 0.78
PDZRN4Q6ZMN7 CYB561D1-205ENST00000430195 5077 ntTSL 2 BASIC19.93■□□□□ 0.78
PDZRN4Q6ZMN7 MFSD1-203ENST00000415822 2423 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
PDZRN4Q6ZMN7 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
PDZRN4Q6ZMN7 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
PDZRN4Q6ZMN7 PCDHA1-203ENST00000504120 5263 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
PDZRN4Q6ZMN7 MBD4-206ENST00000507208 2194 ntAPPRIS ALT2 TSL 2 BASIC19.93■□□□□ 0.78
PDZRN4Q6ZMN7 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
PDZRN4Q6ZMN7 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
PDZRN4Q6ZMN7 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
PDZRN4Q6ZMN7 MIR564-202ENST00000385049 94 ntBASIC19.93■□□□□ 0.78
PDZRN4Q6ZMN7 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC19.93■□□□□ 0.78
PDZRN4Q6ZMN7 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC19.93■□□□□ 0.78
PDZRN4Q6ZMN7 ATP5G2P1-201ENST00000433580 426 ntBASIC19.93■□□□□ 0.78
PDZRN4Q6ZMN7 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC19.93■□□□□ 0.78
PDZRN4Q6ZMN7 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC19.93■□□□□ 0.78
PDZRN4Q6ZMN7 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC19.93■□□□□ 0.78
PDZRN4Q6ZMN7 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC19.93■□□□□ 0.78
PDZRN4Q6ZMN7 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC19.93■□□□□ 0.78
PDZRN4Q6ZMN7 NTF4-201ENST00000593537 932 ntAPPRIS P1 BASIC19.93■□□□□ 0.78
PDZRN4Q6ZMN7 AC079602.3-201ENST00000623931 403 ntBASIC19.93■□□□□ 0.78
PDZRN4Q6ZMN7 SETD3-209ENST00000630307 1281 ntTSL 5 BASIC19.93■□□□□ 0.78
PDZRN4Q6ZMN7 FAM104A-202ENST00000405159 2865 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
PDZRN4Q6ZMN7 SLC5A2-201ENST00000330498 2271 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
PDZRN4Q6ZMN7 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
PDZRN4Q6ZMN7 ARVCF-204ENST00000406522 2682 ntTSL 5 BASIC19.93■□□□□ 0.78
PDZRN4Q6ZMN7 SUSD4-204ENST00000366878 3025 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
PDZRN4Q6ZMN7 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
PDZRN4Q6ZMN7 NSMCE3-201ENST00000332303 4838 ntAPPRIS P1 BASIC19.93■□□□□ 0.78
PDZRN4Q6ZMN7 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
PDZRN4Q6ZMN7 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
PDZRN4Q6ZMN7 CES3-203ENST00000543856 3178 ntTSL 2 BASIC19.93■□□□□ 0.78
PDZRN4Q6ZMN7 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
PDZRN4Q6ZMN7 C16orf89-201ENST00000315997 1872 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
PDZRN4Q6ZMN7 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC19.92■□□□□ 0.78
PDZRN4Q6ZMN7 KRT18P55-202ENST00000578578 1546 ntBASIC19.92■□□□□ 0.78
PDZRN4Q6ZMN7 VAV2-202ENST00000371851 5101 ntAPPRIS ALT2 TSL 5 BASIC19.92■□□□□ 0.78
PDZRN4Q6ZMN7 CCDC59-201ENST00000256151 1983 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
PDZRN4Q6ZMN7 IQCE-212ENST00000476665 2400 ntAPPRIS ALT2 TSL 2 BASIC19.92■□□□□ 0.78
PDZRN4Q6ZMN7 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC19.92■□□□□ 0.78
PDZRN4Q6ZMN7 DIO3OS-208ENST00000556120 2473 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
PDZRN4Q6ZMN7 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
PDZRN4Q6ZMN7 ARNTL2-208ENST00000544915 6785 ntAPPRIS ALT2 TSL 5 BASIC19.92■□□□□ 0.78
PDZRN4Q6ZMN7 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC19.92■□□□□ 0.78
PDZRN4Q6ZMN7 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
PDZRN4Q6ZMN7 HEBP2-201ENST00000367697 844 ntTSL 2 BASIC19.92■□□□□ 0.78
PDZRN4Q6ZMN7 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC19.92■□□□□ 0.78
PDZRN4Q6ZMN7 ELOB-202ENST00000409477 997 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
PDZRN4Q6ZMN7 HLA-F-220ENST00000434407 884 ntBASIC19.92■□□□□ 0.78
PDZRN4Q6ZMN7 ELP6-205ENST00000439305 880 ntTSL 2 BASIC19.92■□□□□ 0.78
PDZRN4Q6ZMN7 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC19.92■□□□□ 0.78
PDZRN4Q6ZMN7 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
PDZRN4Q6ZMN7 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC19.92■□□□□ 0.78
PDZRN4Q6ZMN7 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC19.92■□□□□ 0.78
PDZRN4Q6ZMN7 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC19.92■□□□□ 0.78
PDZRN4Q6ZMN7 AC010463.1-201ENST00000596542 1207 ntAPPRIS P1 TSL 2 BASIC19.92■□□□□ 0.78
PDZRN4Q6ZMN7 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC19.92■□□□□ 0.78
PDZRN4Q6ZMN7 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
PDZRN4Q6ZMN7 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC19.92■□□□□ 0.78
PDZRN4Q6ZMN7 PURB-201ENST00000395699 9069 ntAPPRIS P1 BASIC19.92■□□□□ 0.78
PDZRN4Q6ZMN7 PDE12-202ENST00000487257 3040 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
PDZRN4Q6ZMN7 CEP76-202ENST00000423709 2197 ntTSL 2 BASIC19.92■□□□□ 0.78
PDZRN4Q6ZMN7 DCST1-201ENST00000295542 2279 ntAPPRIS P3 TSL 2 BASIC19.92■□□□□ 0.78
PDZRN4Q6ZMN7 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
PDZRN4Q6ZMN7 KHDRBS1-202ENST00000327300 2757 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
PDZRN4Q6ZMN7 DIRAS2-201ENST00000375765 4386 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
PDZRN4Q6ZMN7 MAST3-201ENST00000262811 5896 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
PDZRN4Q6ZMN7 C17orf62-201ENST00000306645 2093 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
PDZRN4Q6ZMN7 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
PDZRN4Q6ZMN7 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC19.91■□□□□ 0.78
PDZRN4Q6ZMN7 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
PDZRN4Q6ZMN7 RGS7-203ENST00000366564 2295 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
PDZRN4Q6ZMN7 RHBG-204ENST00000537040 1789 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
PDZRN4Q6ZMN7 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
PDZRN4Q6ZMN7 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
PDZRN4Q6ZMN7 AL162258.2-202ENST00000469931 831 ntTSL 5 BASIC19.91■□□□□ 0.78
PDZRN4Q6ZMN7 KRT126P-201ENST00000549467 1181 ntBASIC19.91■□□□□ 0.78
PDZRN4Q6ZMN7 AC104390.1-201ENST00000555663 520 ntBASIC19.91■□□□□ 0.78
PDZRN4Q6ZMN7 AL136038.4-201ENST00000603606 1261 ntBASIC19.91■□□□□ 0.78
PDZRN4Q6ZMN7 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC19.91■□□□□ 0.78
PDZRN4Q6ZMN7 GPX4-210ENST00000611653 793 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
PDZRN4Q6ZMN7 AC068587.9-201ENST00000641814 219 ntBASIC19.91■□□□□ 0.78
PDZRN4Q6ZMN7 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC19.91■□□□□ 0.78
PDZRN4Q6ZMN7 NEO1-201ENST00000261908 7088 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
PDZRN4Q6ZMN7 ALPI-201ENST00000295463 2550 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
PDZRN4Q6ZMN7 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
PDZRN4Q6ZMN7 AC007495.1-201ENST00000501259 2678 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
PDZRN4Q6ZMN7 MYLK2-201ENST00000375985 2787 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
PDZRN4Q6ZMN7 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC19.91■□□□□ 0.78
PDZRN4Q6ZMN7 MYB-201ENST00000316528 3571 ntTSL 5 BASIC19.91■□□□□ 0.78
PDZRN4Q6ZMN7 MYB-241ENST00000616088 3573 ntTSL 5 BASIC19.91■□□□□ 0.78
PDZRN4Q6ZMN7 HDHD2-201ENST00000300605 2212 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
PDZRN4Q6ZMN7 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC19.91■□□□□ 0.78
PDZRN4Q6ZMN7 ZIC5-201ENST00000267294 4639 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
PDZRN4Q6ZMN7 FAM83C-201ENST00000374408 3145 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
PDZRN4Q6ZMN7 MAP3K20-203ENST00000409176 2572 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
PDZRN4Q6ZMN7 GALNT10-203ENST00000425427 4344 ntTSL 2 BASIC19.9■□□□□ 0.78
PDZRN4Q6ZMN7 TSC2-207ENST00000439673 5287 ntAPPRIS ALT2 TSL 2 BASIC19.9■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 70.4 ms