Protein–RNA interactions for Protein: Q6PCD5

RFWD3, E3 ubiquitin-protein ligase RFWD3, humanhuman

Predictions only

Length 774 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFWD3Q6PCD5 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
RFWD3Q6PCD5 ADAMTS17-201ENST00000268070 6207 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
RFWD3Q6PCD5 TBC1D2-202ENST00000375063 2100 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
RFWD3Q6PCD5 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC18.04■□□□□ 0.48
RFWD3Q6PCD5 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
RFWD3Q6PCD5 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
RFWD3Q6PCD5 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC18.03■□□□□ 0.48
RFWD3Q6PCD5 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC18.03■□□□□ 0.48
RFWD3Q6PCD5 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC18.03■□□□□ 0.48
RFWD3Q6PCD5 OLIG2-201ENST00000333337 3262 ntAPPRIS P1 BASIC18.03■□□□□ 0.48
RFWD3Q6PCD5 IL9RP2-201ENST00000423948 1312 ntBASIC18.03■□□□□ 0.48
RFWD3Q6PCD5 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
RFWD3Q6PCD5 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
RFWD3Q6PCD5 IGSF8-201ENST00000314485 2343 ntAPPRIS P2 TSL 1 (best) BASIC18.03■□□□□ 0.48
RFWD3Q6PCD5 ZNF454-201ENST00000320129 2332 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
RFWD3Q6PCD5 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
RFWD3Q6PCD5 ZGLP1-202ENST00000403903 2303 ntAPPRIS P2 TSL 1 (best) BASIC18.03■□□□□ 0.48
RFWD3Q6PCD5 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC18.03■□□□□ 0.48
RFWD3Q6PCD5 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC18.03■□□□□ 0.48
RFWD3Q6PCD5 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
RFWD3Q6PCD5 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
RFWD3Q6PCD5 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
RFWD3Q6PCD5 TFF3-201ENST00000291525 407 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
RFWD3Q6PCD5 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC18.03■□□□□ 0.48
RFWD3Q6PCD5 AL022342.1-201ENST00000400363 863 ntBASIC18.03■□□□□ 0.48
RFWD3Q6PCD5 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC18.03■□□□□ 0.48
RFWD3Q6PCD5 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC18.03■□□□□ 0.48
RFWD3Q6PCD5 AC093909.1-201ENST00000504731 1122 ntBASIC18.03■□□□□ 0.48
RFWD3Q6PCD5 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC18.03■□□□□ 0.48
RFWD3Q6PCD5 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC18.03■□□□□ 0.48
RFWD3Q6PCD5 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC18.03■□□□□ 0.48
RFWD3Q6PCD5 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC18.03■□□□□ 0.48
RFWD3Q6PCD5 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
RFWD3Q6PCD5 AC139887.3-201ENST00000568585 713 ntBASIC18.03■□□□□ 0.48
RFWD3Q6PCD5 LITAF-211ENST00000572255 516 ntTSL 4 BASIC18.03■□□□□ 0.48
RFWD3Q6PCD5 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC18.03■□□□□ 0.48
RFWD3Q6PCD5 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC18.03■□□□□ 0.48
RFWD3Q6PCD5 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC18.03■□□□□ 0.48
RFWD3Q6PCD5 CYGB-205ENST00000590175 830 ntTSL 3 BASIC18.03■□□□□ 0.48
RFWD3Q6PCD5 AC116407.3-201ENST00000623905 1129 ntBASIC18.03■□□□□ 0.48
RFWD3Q6PCD5 AC107918.4-202ENST00000641623 219 ntBASIC18.03■□□□□ 0.48
RFWD3Q6PCD5 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
RFWD3Q6PCD5 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC18.03■□□□□ 0.48
RFWD3Q6PCD5 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
RFWD3Q6PCD5 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
RFWD3Q6PCD5 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC18.03■□□□□ 0.48
RFWD3Q6PCD5 AC009336.1-201ENST00000608941 1553 ntBASIC18.03■□□□□ 0.48
RFWD3Q6PCD5 AKIRIN1-202ENST00000432648 2741 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
RFWD3Q6PCD5 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
RFWD3Q6PCD5 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC18.03■□□□□ 0.48
RFWD3Q6PCD5 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
RFWD3Q6PCD5 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC18.03■□□□□ 0.48
RFWD3Q6PCD5 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC18.03■□□□□ 0.48
RFWD3Q6PCD5 RBBP7-203ENST00000380087 2333 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
RFWD3Q6PCD5 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.48
RFWD3Q6PCD5 DNM2-201ENST00000355667 3541 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
RFWD3Q6PCD5 TCAF2-203ENST00000425618 2448 ntTSL 2 BASIC18.02■□□□□ 0.48
RFWD3Q6PCD5 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
RFWD3Q6PCD5 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
RFWD3Q6PCD5 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
RFWD3Q6PCD5 ADRB3-201ENST00000345060 2950 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
RFWD3Q6PCD5 ZNF710-201ENST00000268154 4617 ntAPPRIS P1 TSL 2 BASIC18.02■□□□□ 0.48
RFWD3Q6PCD5 RPS2P28-201ENST00000314255 741 ntBASIC18.02■□□□□ 0.48
RFWD3Q6PCD5 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
RFWD3Q6PCD5 TCEAL2-202ENST00000372780 1100 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
RFWD3Q6PCD5 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
RFWD3Q6PCD5 RPP38-203ENST00000378202 1030 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
RFWD3Q6PCD5 PRYP5-201ENST00000451909 266 ntBASIC18.02■□□□□ 0.48
RFWD3Q6PCD5 RCHY1-208ENST00000512706 1011 ntTSL 3 BASIC18.02■□□□□ 0.48
RFWD3Q6PCD5 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC18.02■□□□□ 0.48
RFWD3Q6PCD5 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC18.02■□□□□ 0.48
RFWD3Q6PCD5 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC18.02■□□□□ 0.48
RFWD3Q6PCD5 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC18.02■□□□□ 0.48
RFWD3Q6PCD5 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC18.02■□□□□ 0.48
RFWD3Q6PCD5 CHMP4A-211ENST00000609024 735 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
RFWD3Q6PCD5 BX640515.1-201ENST00000617215 977 ntBASIC18.02■□□□□ 0.48
RFWD3Q6PCD5 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC18.02■□□□□ 0.48
RFWD3Q6PCD5 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC18.02■□□□□ 0.48
RFWD3Q6PCD5 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.48
RFWD3Q6PCD5 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
RFWD3Q6PCD5 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC18.02■□□□□ 0.47
RFWD3Q6PCD5 AMT-250ENST00000637682 1823 ntTSL 5 BASIC18.02■□□□□ 0.47
RFWD3Q6PCD5 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC18.02■□□□□ 0.47
RFWD3Q6PCD5 MOB3A-201ENST00000357066 3391 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
RFWD3Q6PCD5 BLCAP-201ENST00000373537 2073 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
RFWD3Q6PCD5 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC18.02■□□□□ 0.47
RFWD3Q6PCD5 PLA2R1-202ENST00000392771 5160 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.47
RFWD3Q6PCD5 HLA-J-201ENST00000462773 1622 ntBASIC18.01■□□□□ 0.47
RFWD3Q6PCD5 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC18.01■□□□□ 0.47
RFWD3Q6PCD5 FBXO33-201ENST00000298097 3853 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
RFWD3Q6PCD5 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC18.01■□□□□ 0.47
RFWD3Q6PCD5 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
RFWD3Q6PCD5 NAP1L4-201ENST00000380542 2511 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
RFWD3Q6PCD5 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
RFWD3Q6PCD5 ISLR2-201ENST00000361742 4817 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
RFWD3Q6PCD5 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC18.01■□□□□ 0.47
RFWD3Q6PCD5 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
RFWD3Q6PCD5 MYCLP1-201ENST00000372451 1075 ntBASIC18.01■□□□□ 0.47
RFWD3Q6PCD5 CSF3-203ENST00000394148 622 ntTSL 3 BASIC18.01■□□□□ 0.47
RFWD3Q6PCD5 CENPM-204ENST00000402420 688 ntTSL 5 BASIC18.01■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 49.3 ms