Protein–RNA interactions for Protein: Q5XG99

LYSMD4, LysM and putative peptidoglycan-binding domain-containing protein 4, humanhuman

Predictions only

Length 296 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD4Q5XG99 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
LYSMD4Q5XG99 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
LYSMD4Q5XG99 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
LYSMD4Q5XG99 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
LYSMD4Q5XG99 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC16.84■□□□□ 0.29
LYSMD4Q5XG99 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
LYSMD4Q5XG99 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
LYSMD4Q5XG99 LRRC37A5P-201ENST00000374304 1103 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
LYSMD4Q5XG99 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
LYSMD4Q5XG99 C6orf52-202ENST00000379586 430 ntAPPRIS ALT2 TSL 2 BASIC16.84■□□□□ 0.29
LYSMD4Q5XG99 CXCL12-206ENST00000395795 404 ntTSL 5 BASIC16.84■□□□□ 0.29
LYSMD4Q5XG99 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC16.84■□□□□ 0.29
LYSMD4Q5XG99 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
LYSMD4Q5XG99 TSPAN32-207ENST00000451520 1236 ntAPPRIS ALT2 TSL 2 BASIC16.84■□□□□ 0.29
LYSMD4Q5XG99 UGT1A2P-201ENST00000454886 866 ntBASIC16.84■□□□□ 0.29
LYSMD4Q5XG99 AL512638.1-201ENST00000457493 794 ntBASIC16.84■□□□□ 0.29
LYSMD4Q5XG99 SLC25A39P2-201ENST00000537614 270 ntBASIC16.84■□□□□ 0.29
LYSMD4Q5XG99 AC090607.3-202ENST00000558971 383 ntTSL 3 BASIC16.84■□□□□ 0.29
LYSMD4Q5XG99 PMF1-BGLAP-204ENST00000567140 655 ntTSL 3 BASIC16.84■□□□□ 0.29
LYSMD4Q5XG99 C19orf33-202ENST00000588605 520 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
LYSMD4Q5XG99 TIMM13-202ENST00000591871 631 ntTSL 5 BASIC16.84■□□□□ 0.29
LYSMD4Q5XG99 LINC01451-201ENST00000623792 534 ntBASIC16.84■□□□□ 0.29
LYSMD4Q5XG99 RAB34-224ENST00000636513 888 ntTSL 5 BASIC16.84■□□□□ 0.29
LYSMD4Q5XG99 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
LYSMD4Q5XG99 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC16.84■□□□□ 0.29
LYSMD4Q5XG99 CORO1A-208ENST00000565497 1348 ntTSL 5 BASIC16.84■□□□□ 0.29
LYSMD4Q5XG99 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC16.84■□□□□ 0.29
LYSMD4Q5XG99 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
LYSMD4Q5XG99 LDOC1-201ENST00000370526 1381 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
LYSMD4Q5XG99 UBAC2-203ENST00000403766 1375 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
LYSMD4Q5XG99 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC16.84■□□□□ 0.29
LYSMD4Q5XG99 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
LYSMD4Q5XG99 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
LYSMD4Q5XG99 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
LYSMD4Q5XG99 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
LYSMD4Q5XG99 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
LYSMD4Q5XG99 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
LYSMD4Q5XG99 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC16.83■□□□□ 0.29
LYSMD4Q5XG99 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
LYSMD4Q5XG99 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC16.83■□□□□ 0.29
LYSMD4Q5XG99 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC16.83■□□□□ 0.29
LYSMD4Q5XG99 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
LYSMD4Q5XG99 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
LYSMD4Q5XG99 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
LYSMD4Q5XG99 CSNK1G2-AS1-201ENST00000314315 1252 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
LYSMD4Q5XG99 PRR15-201ENST00000319694 1678 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
LYSMD4Q5XG99 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
LYSMD4Q5XG99 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
LYSMD4Q5XG99 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC16.83■□□□□ 0.28
LYSMD4Q5XG99 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC16.83■□□□□ 0.28
LYSMD4Q5XG99 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
LYSMD4Q5XG99 MAPK15-202ENST00000395107 834 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
LYSMD4Q5XG99 CYB5A-203ENST00000397914 619 ntTSL 3 BASIC16.83■□□□□ 0.28
LYSMD4Q5XG99 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
LYSMD4Q5XG99 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
LYSMD4Q5XG99 AC016735.2-201ENST00000438736 569 ntTSL 4 BASIC16.83■□□□□ 0.28
LYSMD4Q5XG99 SPDYE14P-201ENST00000442619 822 ntBASIC16.83■□□□□ 0.28
LYSMD4Q5XG99 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC16.83■□□□□ 0.28
LYSMD4Q5XG99 TMEM176B-205ENST00000450753 1006 ntTSL 2 BASIC16.83■□□□□ 0.28
LYSMD4Q5XG99 HNRNPRP1-201ENST00000453465 1695 ntBASIC16.83■□□□□ 0.28
LYSMD4Q5XG99 TM4SF19-204ENST00000454715 1061 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
LYSMD4Q5XG99 CAMKV-204ENST00000466940 1475 ntTSL 2 BASIC16.83■□□□□ 0.28
LYSMD4Q5XG99 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC16.83■□□□□ 0.28
LYSMD4Q5XG99 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC16.83■□□□□ 0.28
LYSMD4Q5XG99 SBK3-202ENST00000612221 1270 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
LYSMD4Q5XG99 RBP1-207ENST00000619087 516 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
LYSMD4Q5XG99 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC16.83■□□□□ 0.28
LYSMD4Q5XG99 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
LYSMD4Q5XG99 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
LYSMD4Q5XG99 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC16.82■□□□□ 0.28
LYSMD4Q5XG99 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
LYSMD4Q5XG99 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
LYSMD4Q5XG99 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC16.82■□□□□ 0.28
LYSMD4Q5XG99 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
LYSMD4Q5XG99 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
LYSMD4Q5XG99 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
LYSMD4Q5XG99 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC16.82■□□□□ 0.28
LYSMD4Q5XG99 PIP4K2A-206ENST00000545335 1436 ntTSL 2 BASIC16.82■□□□□ 0.28
LYSMD4Q5XG99 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
LYSMD4Q5XG99 HR-201ENST00000312841 5351 ntTSL 5 BASIC16.82■□□□□ 0.28
LYSMD4Q5XG99 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC16.82■□□□□ 0.28
LYSMD4Q5XG99 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
LYSMD4Q5XG99 SRP19-201ENST00000282999 937 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
LYSMD4Q5XG99 POP7-201ENST00000303151 927 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
LYSMD4Q5XG99 ALKBH6-202ENST00000378875 973 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
LYSMD4Q5XG99 MIR661-201ENST00000384842 89 ntBASIC16.82■□□□□ 0.28
LYSMD4Q5XG99 TMEM37-202ENST00000409826 794 ntTSL 3 BASIC16.82■□□□□ 0.28
LYSMD4Q5XG99 PLAC9P1-202ENST00000433290 400 ntTSL 2 BASIC16.82■□□□□ 0.28
LYSMD4Q5XG99 AL391335.1-201ENST00000504583 535 ntTSL 4 BASIC16.82■□□□□ 0.28
LYSMD4Q5XG99 AC015712.4-202ENST00000558641 1007 ntTSL 4 BASIC16.82■□□□□ 0.28
LYSMD4Q5XG99 LINC01225-203ENST00000563550 1244 ntBASIC16.82■□□□□ 0.28
LYSMD4Q5XG99 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC16.82■□□□□ 0.28
LYSMD4Q5XG99 LINC02560-201ENST00000596379 459 ntBASIC16.82■□□□□ 0.28
LYSMD4Q5XG99 AC010336.3-201ENST00000597156 667 ntTSL 2 BASIC16.82■□□□□ 0.28
LYSMD4Q5XG99 PGPEP1-209ENST00000604499 769 ntTSL 5 BASIC16.82■□□□□ 0.28
LYSMD4Q5XG99 AL158211.3-201ENST00000607385 239 ntBASIC16.82■□□□□ 0.28
LYSMD4Q5XG99 MIR6080-201ENST00000617359 66 ntBASIC16.82■□□□□ 0.28
LYSMD4Q5XG99 AC008761.3-201ENST00000624803 892 ntBASIC16.82■□□□□ 0.28
LYSMD4Q5XG99 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC16.82■□□□□ 0.28
LYSMD4Q5XG99 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 27 ms