Protein–RNA interactions for Protein: Q5M7Z0

RNFT1, E3 ubiquitin-protein ligase RNFT1, humanhuman

Predictions only

Length 435 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNFT1Q5M7Z0 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
RNFT1Q5M7Z0 MOBP-208ENST00000441980 830 ntAPPRIS P4 TSL 4 BASIC15.49■□□□□ 0.07
RNFT1Q5M7Z0 MLF1-210ENST00000484955 1247 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
RNFT1Q5M7Z0 AC107918.2-201ENST00000530817 355 ntBASIC15.49■□□□□ 0.07
RNFT1Q5M7Z0 AF131215.3-201ENST00000532453 639 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
RNFT1Q5M7Z0 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC15.49■□□□□ 0.07
RNFT1Q5M7Z0 AP002472.1-201ENST00000577490 586 ntBASIC15.49■□□□□ 0.07
RNFT1Q5M7Z0 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC15.49■□□□□ 0.07
RNFT1Q5M7Z0 RPS15-207ENST00000591032 550 ntTSL 3 BASIC15.49■□□□□ 0.07
RNFT1Q5M7Z0 AC027612.4-201ENST00000605371 583 ntBASIC15.49■□□□□ 0.07
RNFT1Q5M7Z0 AC068137.2-201ENST00000605408 478 ntBASIC15.49■□□□□ 0.07
RNFT1Q5M7Z0 STXBP2-222ENST00000612033 1188 ntTSL 5 BASIC15.49■□□□□ 0.07
RNFT1Q5M7Z0 ZNF445-205ENST00000617032 1291 ntTSL 5 BASIC15.49■□□□□ 0.07
RNFT1Q5M7Z0 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC15.49■□□□□ 0.07
RNFT1Q5M7Z0 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
RNFT1Q5M7Z0 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
RNFT1Q5M7Z0 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC15.49■□□□□ 0.07
RNFT1Q5M7Z0 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
RNFT1Q5M7Z0 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
RNFT1Q5M7Z0 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
RNFT1Q5M7Z0 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC15.49■□□□□ 0.07
RNFT1Q5M7Z0 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
RNFT1Q5M7Z0 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
RNFT1Q5M7Z0 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC15.49■□□□□ 0.07
RNFT1Q5M7Z0 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC15.48■□□□□ 0.07
RNFT1Q5M7Z0 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
RNFT1Q5M7Z0 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
RNFT1Q5M7Z0 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
RNFT1Q5M7Z0 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC15.48■□□□□ 0.07
RNFT1Q5M7Z0 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
RNFT1Q5M7Z0 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC15.48■□□□□ 0.07
RNFT1Q5M7Z0 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC15.48■□□□□ 0.07
RNFT1Q5M7Z0 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
RNFT1Q5M7Z0 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC15.48■□□□□ 0.07
RNFT1Q5M7Z0 GPX7-201ENST00000361314 1228 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
RNFT1Q5M7Z0 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC15.48■□□□□ 0.07
RNFT1Q5M7Z0 PCAT6-201ENST00000417262 748 ntTSL 2 BASIC15.48■□□□□ 0.07
RNFT1Q5M7Z0 GSTK1-207ENST00000479303 1185 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
RNFT1Q5M7Z0 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC15.48■□□□□ 0.07
RNFT1Q5M7Z0 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC15.48■□□□□ 0.07
RNFT1Q5M7Z0 AP000777.2-201ENST00000539897 501 ntTSL 4 BASIC15.48■□□□□ 0.07
RNFT1Q5M7Z0 STX10-204ENST00000587230 1136 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
RNFT1Q5M7Z0 AC010615.2-202ENST00000597444 832 ntTSL 3 BASIC15.48■□□□□ 0.07
RNFT1Q5M7Z0 AC244153.1-202ENST00000617855 482 ntTSL 3 BASIC15.48■□□□□ 0.07
RNFT1Q5M7Z0 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC15.48■□□□□ 0.07
RNFT1Q5M7Z0 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC15.48■□□□□ 0.07
RNFT1Q5M7Z0 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
RNFT1Q5M7Z0 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC15.48■□□□□ 0.07
RNFT1Q5M7Z0 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
RNFT1Q5M7Z0 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC15.48■□□□□ 0.07
RNFT1Q5M7Z0 LYPLAL1-201ENST00000366927 1819 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
RNFT1Q5M7Z0 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC15.47■□□□□ 0.07
RNFT1Q5M7Z0 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
RNFT1Q5M7Z0 AC129492.6-201ENST00000611383 1305 ntBASIC15.47■□□□□ 0.07
RNFT1Q5M7Z0 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC15.47■□□□□ 0.07
RNFT1Q5M7Z0 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC15.47■□□□□ 0.07
RNFT1Q5M7Z0 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
RNFT1Q5M7Z0 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
RNFT1Q5M7Z0 NMRK2-201ENST00000168977 1126 ntAPPRIS P3 TSL 2 BASIC15.47■□□□□ 0.07
RNFT1Q5M7Z0 CLTA-201ENST00000242285 1152 ntAPPRIS P4 TSL 1 (best) BASIC15.47■□□□□ 0.07
RNFT1Q5M7Z0 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
RNFT1Q5M7Z0 ATP23-201ENST00000300145 1245 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
RNFT1Q5M7Z0 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC15.47■□□□□ 0.07
RNFT1Q5M7Z0 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
RNFT1Q5M7Z0 BAX-203ENST00000354470 433 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
RNFT1Q5M7Z0 NEK7-201ENST00000367383 586 ntTSL 2 BASIC15.47■□□□□ 0.07
RNFT1Q5M7Z0 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
RNFT1Q5M7Z0 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
RNFT1Q5M7Z0 ACTG1P14-201ENST00000446382 1122 ntBASIC15.47■□□□□ 0.07
RNFT1Q5M7Z0 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
RNFT1Q5M7Z0 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
RNFT1Q5M7Z0 NECAP2-208ENST00000504551 768 ntTSL 5 BASIC15.47■□□□□ 0.07
RNFT1Q5M7Z0 FAM118B-206ENST00000529731 1028 ntTSL 5 BASIC15.47■□□□□ 0.07
RNFT1Q5M7Z0 CYB561D1-209ENST00000533024 913 ntTSL 2 BASIC15.47■□□□□ 0.07
RNFT1Q5M7Z0 CCND1-203ENST00000536559 553 ntTSL 3 BASIC15.47■□□□□ 0.07
RNFT1Q5M7Z0 RIMS4-202ENST00000541604 1036 ntAPPRIS ALT1 TSL 1 (best) BASIC15.47■□□□□ 0.07
RNFT1Q5M7Z0 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC15.47■□□□□ 0.07
RNFT1Q5M7Z0 AL157832.3-201ENST00000635764 1005 ntTSL 5 BASIC15.47■□□□□ 0.07
RNFT1Q5M7Z0 ESR2-201ENST00000267525 1518 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
RNFT1Q5M7Z0 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC15.47■□□□□ 0.07
RNFT1Q5M7Z0 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC15.47■□□□□ 0.07
RNFT1Q5M7Z0 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC15.47■□□□□ 0.07
RNFT1Q5M7Z0 R3HDML-201ENST00000217043 1377 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
RNFT1Q5M7Z0 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
RNFT1Q5M7Z0 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
RNFT1Q5M7Z0 AC008764.6-201ENST00000595909 2069 ntBASIC15.47■□□□□ 0.07
RNFT1Q5M7Z0 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC15.47■□□□□ 0.07
RNFT1Q5M7Z0 OPCML-202ENST00000374778 1302 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
RNFT1Q5M7Z0 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
RNFT1Q5M7Z0 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
RNFT1Q5M7Z0 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
RNFT1Q5M7Z0 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.07
RNFT1Q5M7Z0 PDHX-203ENST00000448838 2653 ntTSL 5 BASIC15.46■□□□□ 0.07
RNFT1Q5M7Z0 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC15.46■□□□□ 0.07
RNFT1Q5M7Z0 TECR-201ENST00000215567 1171 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
RNFT1Q5M7Z0 STOM-202ENST00000347359 870 ntTSL 2 BASIC15.46■□□□□ 0.07
RNFT1Q5M7Z0 CRLF2-202ENST00000381567 1013 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
RNFT1Q5M7Z0 FALEC-201ENST00000416894 566 ntTSL 3 BASIC15.46■□□□□ 0.07
RNFT1Q5M7Z0 IQCF3-204ENST00000446775 1241 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
RNFT1Q5M7Z0 TMEM205-202ENST00000447337 916 ntAPPRIS P1 TSL 2 BASIC15.46■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 53.9 ms