Protein–RNA interactions for Protein: Q4VXA5

KHDC1, KH homology domain-containing protein 1, humanhuman

Known RBP Predictions only

Length 237 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KHDC1Q4VXA5 ELFN2-208ENST00000430883 1970 ntTSL 2 BASIC17.52■□□□□ 0.4
KHDC1Q4VXA5 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
KHDC1Q4VXA5 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
KHDC1Q4VXA5 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
KHDC1Q4VXA5 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
KHDC1Q4VXA5 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC17.52■□□□□ 0.4
KHDC1Q4VXA5 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
KHDC1Q4VXA5 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC17.52■□□□□ 0.4
KHDC1Q4VXA5 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
KHDC1Q4VXA5 NAT6-202ENST00000417393 1163 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
KHDC1Q4VXA5 AL450487.1-201ENST00000426799 995 ntBASIC17.52■□□□□ 0.4
KHDC1Q4VXA5 AC091304.2-201ENST00000564639 760 ntBASIC17.52■□□□□ 0.4
KHDC1Q4VXA5 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
KHDC1Q4VXA5 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC17.52■□□□□ 0.4
KHDC1Q4VXA5 AL121772.3-201ENST00000610840 674 ntBASIC17.52■□□□□ 0.4
KHDC1Q4VXA5 IRF5-214ENST00000613821 595 ntTSL 5 BASIC17.52■□□□□ 0.4
KHDC1Q4VXA5 ASAH1-255ENST00000637638 699 ntTSL 2 BASIC17.52■□□□□ 0.4
KHDC1Q4VXA5 SP2-201ENST00000376741 3112 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
KHDC1Q4VXA5 GLS2-216ENST00000610413 2296 ntTSL 5 BASIC17.52■□□□□ 0.4
KHDC1Q4VXA5 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
KHDC1Q4VXA5 POLR3H-202ENST00000355209 4416 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
KHDC1Q4VXA5 MYEF2-215ENST00000610570 2591 ntTSL 5 BASIC17.52■□□□□ 0.39
KHDC1Q4VXA5 LINC02199-201ENST00000506655 2702 ntBASIC17.52■□□□□ 0.39
KHDC1Q4VXA5 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.39
KHDC1Q4VXA5 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC17.52■□□□□ 0.39
KHDC1Q4VXA5 PIAS4-201ENST00000262971 3159 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
KHDC1Q4VXA5 ZNF628-201ENST00000391718 3177 ntAPPRIS ALT2 BASIC17.52■□□□□ 0.39
KHDC1Q4VXA5 RALGDS-205ENST00000393160 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.39
KHDC1Q4VXA5 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
KHDC1Q4VXA5 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC17.52■□□□□ 0.39
KHDC1Q4VXA5 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC17.52■□□□□ 0.39
KHDC1Q4VXA5 KLHDC7B-201ENST00000395676 2991 ntAPPRIS P1 BASIC17.52■□□□□ 0.39
KHDC1Q4VXA5 HYAL1-202ENST00000320295 2324 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.39
KHDC1Q4VXA5 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
KHDC1Q4VXA5 WASF1-207ENST00000392589 3220 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
KHDC1Q4VXA5 TIGD2-202ENST00000603357 3217 ntAPPRIS P1 TSL 4 BASIC17.51■□□□□ 0.39
KHDC1Q4VXA5 IFRD1-202ENST00000403825 2290 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
KHDC1Q4VXA5 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
KHDC1Q4VXA5 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC17.51■□□□□ 0.39
KHDC1Q4VXA5 HRASLS5-206ENST00000540857 3032 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
KHDC1Q4VXA5 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
KHDC1Q4VXA5 REXO1L11P-201ENST00000620964 1927 ntBASIC17.51■□□□□ 0.39
KHDC1Q4VXA5 ATP6V0E2-AS1-201ENST00000461019 2973 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
KHDC1Q4VXA5 LRRC59-201ENST00000225972 2910 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
KHDC1Q4VXA5 SPATA22-202ENST00000355380 1216 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
KHDC1Q4VXA5 PRMT6-201ENST00000370078 2616 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
KHDC1Q4VXA5 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC17.51■□□□□ 0.39
KHDC1Q4VXA5 COX5BP2-201ENST00000392354 334 ntBASIC17.51■□□□□ 0.39
KHDC1Q4VXA5 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
KHDC1Q4VXA5 LSM5-204ENST00000409909 740 ntTSL 2 BASIC17.51■□□□□ 0.39
KHDC1Q4VXA5 TMEM213-202ENST00000413208 480 ntAPPRIS ALT2 TSL 3 BASIC17.51■□□□□ 0.39
KHDC1Q4VXA5 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC17.51■□□□□ 0.39
KHDC1Q4VXA5 THAP5-204ENST00000438865 868 ntTSL 2 BASIC17.51■□□□□ 0.39
KHDC1Q4VXA5 DDX43P3-201ENST00000441064 443 ntBASIC17.51■□□□□ 0.39
KHDC1Q4VXA5 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC17.51■□□□□ 0.39
KHDC1Q4VXA5 DANCR-204ENST00000444958 709 ntTSL 3 BASIC17.51■□□□□ 0.39
KHDC1Q4VXA5 KRT16P4-201ENST00000453883 522 ntBASIC17.51■□□□□ 0.39
KHDC1Q4VXA5 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
KHDC1Q4VXA5 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC17.51■□□□□ 0.39
KHDC1Q4VXA5 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC17.51■□□□□ 0.39
KHDC1Q4VXA5 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC17.51■□□□□ 0.39
KHDC1Q4VXA5 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
KHDC1Q4VXA5 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC17.51■□□□□ 0.39
KHDC1Q4VXA5 AC116407.2-201ENST00000613639 860 ntBASIC17.51■□□□□ 0.39
KHDC1Q4VXA5 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC17.51■□□□□ 0.39
KHDC1Q4VXA5 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
KHDC1Q4VXA5 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
KHDC1Q4VXA5 PCDHA1-201ENST00000378133 2726 ntBASIC17.51■□□□□ 0.39
KHDC1Q4VXA5 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
KHDC1Q4VXA5 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
KHDC1Q4VXA5 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
KHDC1Q4VXA5 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
KHDC1Q4VXA5 COPS7B-206ENST00000410017 2051 ntTSL 3 BASIC17.51■□□□□ 0.39
KHDC1Q4VXA5 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
KHDC1Q4VXA5 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
KHDC1Q4VXA5 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
KHDC1Q4VXA5 AL355312.1-201ENST00000407115 2176 ntBASIC17.5■□□□□ 0.39
KHDC1Q4VXA5 SLC39A8-201ENST00000356736 3144 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
KHDC1Q4VXA5 HAGH-202ENST00000397356 2984 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
KHDC1Q4VXA5 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
KHDC1Q4VXA5 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
KHDC1Q4VXA5 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC17.5■□□□□ 0.39
KHDC1Q4VXA5 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC17.5■□□□□ 0.39
KHDC1Q4VXA5 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
KHDC1Q4VXA5 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
KHDC1Q4VXA5 SPIN3-224ENST00000639583 2245 ntTSL 5 BASIC17.5■□□□□ 0.39
KHDC1Q4VXA5 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
KHDC1Q4VXA5 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
KHDC1Q4VXA5 AKR1C7P-201ENST00000305623 895 ntBASIC17.5■□□□□ 0.39
KHDC1Q4VXA5 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC17.5■□□□□ 0.39
KHDC1Q4VXA5 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
KHDC1Q4VXA5 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC17.5■□□□□ 0.39
KHDC1Q4VXA5 METTL21A-205ENST00000426075 1051 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
KHDC1Q4VXA5 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC17.5■□□□□ 0.39
KHDC1Q4VXA5 PON3-205ENST00000451904 1053 ntTSL 3 BASIC17.5■□□□□ 0.39
KHDC1Q4VXA5 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC17.5■□□□□ 0.39
KHDC1Q4VXA5 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC17.5■□□□□ 0.39
KHDC1Q4VXA5 CBFB-203ENST00000561924 584 ntTSL 5 BASIC17.5■□□□□ 0.39
KHDC1Q4VXA5 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
KHDC1Q4VXA5 AL591684.3-201ENST00000605187 298 ntBASIC17.5■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 23.1 ms