Protein–RNA interactions for Protein: P78395

PRAME, Melanoma antigen preferentially expressed in tumors, humanhuman

Predictions only

Length 509 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEP78395 PPP1R3G-201ENST00000405617 4907 ntAPPRIS P1 BASIC17.46■□□□□ 0.39
PRAMEP78395 RTEL1-TNFRSF6B-202ENST00000482936 4931 ntAPPRIS P5 TSL 2 BASIC17.46■□□□□ 0.39
PRAMEP78395 FICD-204ENST00000552695 3347 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
PRAMEP78395 CCDC154-202ENST00000409671 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
PRAMEP78395 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
PRAMEP78395 NEO1-202ENST00000339362 7342 ntAPPRIS P3 TSL 5 BASIC17.46■□□□□ 0.39
PRAMEP78395 MOB3A-201ENST00000357066 3391 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
PRAMEP78395 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
PRAMEP78395 PTCH1-201ENST00000331920 8057 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
PRAMEP78395 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC17.46■□□□□ 0.39
PRAMEP78395 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
PRAMEP78395 IGSF8-201ENST00000314485 2343 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.38
PRAMEP78395 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC17.46■□□□□ 0.38
PRAMEP78395 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
PRAMEP78395 MIDN-201ENST00000300952 3790 ntAPPRIS P2 TSL 5 BASIC17.45■□□□□ 0.38
PRAMEP78395 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
PRAMEP78395 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
PRAMEP78395 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
PRAMEP78395 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
PRAMEP78395 SCAF8-201ENST00000367178 5057 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
PRAMEP78395 VAV3-210ENST00000527011 4510 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
PRAMEP78395 WASHC2C-209ENST00000540872 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
PRAMEP78395 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
PRAMEP78395 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC17.45■□□□□ 0.38
PRAMEP78395 ZNF264-202ENST00000536056 2078 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
PRAMEP78395 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC17.45■□□□□ 0.38
PRAMEP78395 CORT-201ENST00000377049 1130 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
PRAMEP78395 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC17.45■□□□□ 0.38
PRAMEP78395 LENG8-AS1-201ENST00000416022 582 ntTSL 3 BASIC17.45■□□□□ 0.38
PRAMEP78395 POM121L3P-201ENST00000419331 1163 ntBASIC17.45■□□□□ 0.38
PRAMEP78395 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
PRAMEP78395 STK19B-204ENST00000512515 211 ntBASIC17.45■□□□□ 0.38
PRAMEP78395 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC17.45■□□□□ 0.38
PRAMEP78395 AC099336.1-202ENST00000602961 463 ntBASIC17.45■□□□□ 0.38
PRAMEP78395 KDM5C-202ENST00000375379 5245 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
PRAMEP78395 EPHX2-204ENST00000518379 1959 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
PRAMEP78395 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
PRAMEP78395 ANKMY1-202ENST00000361678 2499 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
PRAMEP78395 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
PRAMEP78395 APBA2-207ENST00000558402 4031 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
PRAMEP78395 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
PRAMEP78395 TDRD7-201ENST00000355295 3834 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
PRAMEP78395 AC116353.5-201ENST00000638148 1699 ntBASIC17.45■□□□□ 0.38
PRAMEP78395 ADAMTSL5-201ENST00000330475 2857 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
PRAMEP78395 BTBD3-201ENST00000254977 4686 ntAPPRIS ALT1 TSL 2 BASIC17.45■□□□□ 0.38
PRAMEP78395 INTS4P1-201ENST00000438455 1935 ntBASIC17.45■□□□□ 0.38
PRAMEP78395 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC17.45■□□□□ 0.38
PRAMEP78395 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
PRAMEP78395 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
PRAMEP78395 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
PRAMEP78395 RDH12-201ENST00000267502 1833 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
PRAMEP78395 AGBL5-202ENST00000360131 3177 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
PRAMEP78395 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
PRAMEP78395 ATP6V0E2-202ENST00000425642 1649 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
PRAMEP78395 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
PRAMEP78395 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
PRAMEP78395 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
PRAMEP78395 C6orf15-201ENST00000259870 1140 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
PRAMEP78395 AC003669.1-201ENST00000334569 611 ntBASIC17.44■□□□□ 0.38
PRAMEP78395 RCN1P2-201ENST00000398357 915 ntBASIC17.44■□□□□ 0.38
PRAMEP78395 KLF4P1-201ENST00000412782 1185 ntBASIC17.44■□□□□ 0.38
PRAMEP78395 METTL21A-205ENST00000426075 1051 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
PRAMEP78395 AL162258.2-202ENST00000469931 831 ntTSL 5 BASIC17.44■□□□□ 0.38
PRAMEP78395 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC17.44■□□□□ 0.38
PRAMEP78395 AC114341.1-201ENST00000618070 349 ntBASIC17.44■□□□□ 0.38
PRAMEP78395 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC17.44■□□□□ 0.38
PRAMEP78395 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC17.44■□□□□ 0.38
PRAMEP78395 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
PRAMEP78395 DHRS4L2-211ENST00000621761 1049 ntTSL 5 BASIC17.44■□□□□ 0.38
PRAMEP78395 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC17.44■□□□□ 0.38
PRAMEP78395 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
PRAMEP78395 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
PRAMEP78395 AK4-207ENST00000545314 6887 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
PRAMEP78395 KDM4B-211ENST00000611640 5703 ntTSL 5 BASIC17.44■□□□□ 0.38
PRAMEP78395 CLDN4-201ENST00000340958 1831 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
PRAMEP78395 DUSP8-201ENST00000331588 4455 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
PRAMEP78395 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
PRAMEP78395 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
PRAMEP78395 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
PRAMEP78395 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
PRAMEP78395 ASTN2-202ENST00000313400 4747 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
PRAMEP78395 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
PRAMEP78395 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
PRAMEP78395 ASTN2-205ENST00000361209 4622 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
PRAMEP78395 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
PRAMEP78395 PEG3-206ENST00000598410 5304 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
PRAMEP78395 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
PRAMEP78395 ADRA1A-206ENST00000380586 2304 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
PRAMEP78395 ANAPC2-201ENST00000323927 2632 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
PRAMEP78395 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
PRAMEP78395 NLRP6-203ENST00000534750 2936 ntAPPRIS ALT2 TSL 2 BASIC17.43■□□□□ 0.38
PRAMEP78395 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
PRAMEP78395 KAZN-201ENST00000361144 3838 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
PRAMEP78395 ENSA-206ENST00000361631 725 ntTSL 2 BASIC17.43■□□□□ 0.38
PRAMEP78395 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC17.43■□□□□ 0.38
PRAMEP78395 UPK3BP1-201ENST00000428678 509 ntBASIC17.43■□□□□ 0.38
PRAMEP78395 THAP5-204ENST00000438865 868 ntTSL 2 BASIC17.43■□□□□ 0.38
PRAMEP78395 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC17.43■□□□□ 0.38
PRAMEP78395 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC17.43■□□□□ 0.38
PRAMEP78395 COX5A-204ENST00000567270 579 ntTSL 3 BASIC17.43■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 30.4 ms