Protein–RNA interactions for Protein: P61009

SPCS3, Signal peptidase complex subunit 3, humanhuman

Predictions only

Length 180 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPCS3P61009 KRT18P48-201ENST00000434763 852 ntBASIC14.12□□□□□ -0.15
SPCS3P61009 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
SPCS3P61009 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC14.12□□□□□ -0.15
SPCS3P61009 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
SPCS3P61009 CD81-212ENST00000526072 1172 ntTSL 5 BASIC14.12□□□□□ -0.15
SPCS3P61009 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC14.12□□□□□ -0.15
SPCS3P61009 TEN1-204ENST00000588202 862 ntTSL 3 BASIC14.12□□□□□ -0.15
SPCS3P61009 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
SPCS3P61009 AL139327.4-201ENST00000612362 153 ntBASIC14.12□□□□□ -0.15
SPCS3P61009 EFEMP1-202ENST00000394555 3024 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
SPCS3P61009 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
SPCS3P61009 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC14.12□□□□□ -0.15
SPCS3P61009 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
SPCS3P61009 KRT8P9-201ENST00000558927 1449 ntBASIC14.12□□□□□ -0.15
SPCS3P61009 ITPR3-201ENST00000374316 9870 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
SPCS3P61009 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
SPCS3P61009 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC14.12□□□□□ -0.15
SPCS3P61009 NXN-210ENST00000575801 2681 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
SPCS3P61009 CDS1-201ENST00000295887 4461 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
SPCS3P61009 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC14.12□□□□□ -0.15
SPCS3P61009 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
SPCS3P61009 LRRC57-204ENST00000563454 2407 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
SPCS3P61009 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC14.12□□□□□ -0.15
SPCS3P61009 B3GNT4-206ENST00000546192 2749 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
SPCS3P61009 COX10-201ENST00000261643 2873 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
SPCS3P61009 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC14.12□□□□□ -0.15
SPCS3P61009 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
SPCS3P61009 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC14.12□□□□□ -0.15
SPCS3P61009 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC14.11□□□□□ -0.15
SPCS3P61009 AAK1-202ENST00000409068 2606 ntTSL 2 BASIC14.11□□□□□ -0.15
SPCS3P61009 RHBDF1P1-201ENST00000427504 1941 ntBASIC14.11□□□□□ -0.15
SPCS3P61009 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC14.11□□□□□ -0.15
SPCS3P61009 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
SPCS3P61009 HMGXB3-202ENST00000503427 5275 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
SPCS3P61009 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
SPCS3P61009 DNAAF2-202ENST00000406043 2819 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
SPCS3P61009 SRPK1-204ENST00000373825 4592 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
SPCS3P61009 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
SPCS3P61009 MICALL2-201ENST00000297508 3121 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
SPCS3P61009 OS9-205ENST00000413095 1660 ntTSL 2 BASIC14.11□□□□□ -0.15
SPCS3P61009 TTLL10-201ENST00000379288 2114 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
SPCS3P61009 ABCG5-201ENST00000260645 2740 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
SPCS3P61009 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
SPCS3P61009 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
SPCS3P61009 GPAT2-201ENST00000359548 2761 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
SPCS3P61009 CD300A-202ENST00000360141 1858 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
SPCS3P61009 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
SPCS3P61009 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
SPCS3P61009 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
SPCS3P61009 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC14.11□□□□□ -0.15
SPCS3P61009 AC060834.1-201ENST00000443027 2032 ntBASIC14.11□□□□□ -0.15
SPCS3P61009 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC14.11□□□□□ -0.15
SPCS3P61009 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC14.11□□□□□ -0.15
SPCS3P61009 GCSHP2-201ENST00000560971 527 ntBASIC14.11□□□□□ -0.15
SPCS3P61009 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
SPCS3P61009 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
SPCS3P61009 AC004263.2-201ENST00000617183 678 ntBASIC14.11□□□□□ -0.15
SPCS3P61009 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC14.11□□□□□ -0.15
SPCS3P61009 PPP1R16B-201ENST00000299824 6251 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
SPCS3P61009 MAP4K1-201ENST00000396857 2653 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
SPCS3P61009 SERPINH1-201ENST00000358171 2225 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
SPCS3P61009 DIRAS2-201ENST00000375765 4386 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
SPCS3P61009 PHGDH-208ENST00000641023 2096 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
SPCS3P61009 HYAL3-201ENST00000336307 1942 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
SPCS3P61009 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
SPCS3P61009 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
SPCS3P61009 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
SPCS3P61009 PCDHA12-201ENST00000398631 5233 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
SPCS3P61009 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC14.11□□□□□ -0.15
SPCS3P61009 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
SPCS3P61009 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
SPCS3P61009 C10orf10-201ENST00000298295 2120 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
SPCS3P61009 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
SPCS3P61009 IQSEC3-203ENST00000538872 7094 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
SPCS3P61009 TRIM67-202ENST00000444294 9320 ntAPPRIS ALT1 TSL 5 BASIC14.11□□□□□ -0.15
SPCS3P61009 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
SPCS3P61009 ZNF764-202ENST00000395091 2970 ntAPPRIS ALT1 TSL 2 BASIC14.1□□□□□ -0.15
SPCS3P61009 SLC1A6-208ENST00000598504 2987 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
SPCS3P61009 CTDSP2-201ENST00000398073 4795 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
SPCS3P61009 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC14.1□□□□□ -0.15
SPCS3P61009 ARMC5-203ENST00000457010 4844 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
SPCS3P61009 CXorf38-202ENST00000378421 2380 ntTSL 2 BASIC14.1□□□□□ -0.15
SPCS3P61009 AL391807.1-203ENST00000604392 2365 ntBASIC14.1□□□□□ -0.15
SPCS3P61009 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
SPCS3P61009 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
SPCS3P61009 MAP7D1-203ENST00000373150 3238 ntAPPRIS ALT2 TSL 2 BASIC14.1□□□□□ -0.15
SPCS3P61009 HCLS1-202ENST00000428394 1560 ntTSL 2 BASIC14.1□□□□□ -0.15
SPCS3P61009 TTBK1-201ENST00000259750 6932 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
SPCS3P61009 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
SPCS3P61009 BMI1-201ENST00000376663 3428 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
SPCS3P61009 ARL6IP1-201ENST00000304414 2409 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
SPCS3P61009 JRK-209ENST00000612905 9124 ntAPPRIS P4 TSL 2 BASIC14.1□□□□□ -0.15
SPCS3P61009 RASAL3-201ENST00000343625 3293 ntAPPRIS P2 TSL 2 BASIC14.1□□□□□ -0.15
SPCS3P61009 PNO1-201ENST00000263657 2286 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
SPCS3P61009 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC14.1□□□□□ -0.15
SPCS3P61009 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
SPCS3P61009 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC14.1□□□□□ -0.15
SPCS3P61009 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
SPCS3P61009 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC14.1□□□□□ -0.15
SPCS3P61009 PPOX-214ENST00000535223 664 ntTSL 3 BASIC14.1□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 36.2 ms