Protein–RNA interactions for Protein: P58876

HIST1H2BD, Histone H2B type 1-D, humanhuman

Predictions only

Length 126 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H2BDP58876 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
HIST1H2BDP58876 HSD17B4-222ENST00000515320 2494 ntTSL 2 BASIC13□□□□□ -0.33
HIST1H2BDP58876 PDE1B-207ENST00000550620 2150 ntTSL 1 (best) BASIC13□□□□□ -0.33
HIST1H2BDP58876 TCP10-210ENST00000617120 2182 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
HIST1H2BDP58876 GDA-201ENST00000238018 2074 ntTSL 1 (best) BASIC13□□□□□ -0.33
HIST1H2BDP58876 ME2P1-201ENST00000426028 1970 ntBASIC13□□□□□ -0.33
HIST1H2BDP58876 CLEC18A-203ENST00000449317 1875 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
HIST1H2BDP58876 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
HIST1H2BDP58876 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
HIST1H2BDP58876 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
HIST1H2BDP58876 ZNF804B-201ENST00000333190 4659 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
HIST1H2BDP58876 SEPT7-201ENST00000350320 4350 ntAPPRIS P5 TSL 5 BASIC13□□□□□ -0.33
HIST1H2BDP58876 NEO1-207ENST00000560262 4315 ntTSL 1 (best) BASIC13□□□□□ -0.33
HIST1H2BDP58876 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC13□□□□□ -0.33
HIST1H2BDP58876 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC13□□□□□ -0.33
HIST1H2BDP58876 CUX1-211ENST00000546411 4212 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
HIST1H2BDP58876 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
HIST1H2BDP58876 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC13□□□□□ -0.33
HIST1H2BDP58876 EPHA2-201ENST00000358432 3964 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
HIST1H2BDP58876 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
HIST1H2BDP58876 CTAG1B-201ENST00000328435 748 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
HIST1H2BDP58876 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC13□□□□□ -0.33
HIST1H2BDP58876 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC13□□□□□ -0.33
HIST1H2BDP58876 SLC25A1P3-201ENST00000395415 828 ntBASIC13□□□□□ -0.33
HIST1H2BDP58876 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC13□□□□□ -0.33
HIST1H2BDP58876 POU5F1P3-201ENST00000428824 1078 ntBASIC13□□□□□ -0.33
HIST1H2BDP58876 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC13□□□□□ -0.33
HIST1H2BDP58876 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC13□□□□□ -0.33
HIST1H2BDP58876 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC13□□□□□ -0.33
HIST1H2BDP58876 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC13□□□□□ -0.33
HIST1H2BDP58876 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
HIST1H2BDP58876 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC13□□□□□ -0.33
HIST1H2BDP58876 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC13□□□□□ -0.33
HIST1H2BDP58876 CTAG1A-202ENST00000599837 748 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
HIST1H2BDP58876 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
HIST1H2BDP58876 UCKL1-AS1-201ENST00000623569 3602 ntBASIC13□□□□□ -0.33
HIST1H2BDP58876 RSPRY1-202ENST00000537866 3586 ntAPPRIS P1 TSL 2 BASIC13□□□□□ -0.33
HIST1H2BDP58876 MTRF1L-201ENST00000367230 3431 ntTSL 1 (best) BASIC13□□□□□ -0.33
HIST1H2BDP58876 DTX3-202ENST00000548198 3199 ntAPPRIS P3 TSL 2 BASIC13□□□□□ -0.33
HIST1H2BDP58876 BICDL1-201ENST00000397558 3055 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
HIST1H2BDP58876 CEP63-212ENST00000513612 2903 ntAPPRIS P3 TSL 2 BASIC13□□□□□ -0.33
HIST1H2BDP58876 SHROOM4-201ENST00000289292 6261 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
HIST1H2BDP58876 SYAP1-201ENST00000380155 6129 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
HIST1H2BDP58876 MCFD2-201ENST00000319466 4182 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
HIST1H2BDP58876 SERPINE3-204ENST00000524365 2293 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
HIST1H2BDP58876 RGR-202ENST00000359452 2247 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
HIST1H2BDP58876 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC13□□□□□ -0.33
HIST1H2BDP58876 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC13□□□□□ -0.33
HIST1H2BDP58876 PLPPR4-203ENST00000457765 4846 ntTSL 2 BASIC13□□□□□ -0.33
HIST1H2BDP58876 TBC1D17-202ENST00000535102 2025 ntTSL 2 BASIC13□□□□□ -0.33
HIST1H2BDP58876 ARHGAP4-202ENST00000370016 3095 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
HIST1H2BDP58876 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
HIST1H2BDP58876 AC093525.9-201ENST00000624961 1746 ntBASIC12.99□□□□□ -0.33
HIST1H2BDP58876 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
HIST1H2BDP58876 AL109659.2-201ENST00000606809 1674 ntBASIC12.99□□□□□ -0.33
HIST1H2BDP58876 TEAD3-202ENST00000402886 2729 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
HIST1H2BDP58876 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC12.99□□□□□ -0.33
HIST1H2BDP58876 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC12.99□□□□□ -0.33
HIST1H2BDP58876 WARS-232ENST00000556645 2508 ntTSL 5 BASIC12.99□□□□□ -0.33
HIST1H2BDP58876 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC12.99□□□□□ -0.33
HIST1H2BDP58876 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC12.99□□□□□ -0.33
HIST1H2BDP58876 ZFAND6-207ENST00000558494 1472 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
HIST1H2BDP58876 GCK-202ENST00000345378 2421 ntTSL 2 BASIC12.99□□□□□ -0.33
HIST1H2BDP58876 PHAX-201ENST00000297540 4288 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
HIST1H2BDP58876 LINC01311-201ENST00000565162 1445 ntBASIC12.99□□□□□ -0.33
HIST1H2BDP58876 FRMD5-209ENST00000484674 2319 ntTSL 2 BASIC12.99□□□□□ -0.33
HIST1H2BDP58876 CDT1-201ENST00000301019 3240 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
HIST1H2BDP58876 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC12.99□□□□□ -0.33
HIST1H2BDP58876 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
HIST1H2BDP58876 ACE-203ENST00000413513 2237 ntTSL 2 BASIC12.99□□□□□ -0.33
HIST1H2BDP58876 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC12.99□□□□□ -0.33
HIST1H2BDP58876 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
HIST1H2BDP58876 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
HIST1H2BDP58876 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
HIST1H2BDP58876 MZT2B-201ENST00000281871 933 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
HIST1H2BDP58876 MZT2A-201ENST00000309451 624 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
HIST1H2BDP58876 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
HIST1H2BDP58876 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
HIST1H2BDP58876 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC12.99□□□□□ -0.33
HIST1H2BDP58876 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
HIST1H2BDP58876 TESC-206ENST00000541210 936 ntTSL 3 BASIC12.99□□□□□ -0.33
HIST1H2BDP58876 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC12.99□□□□□ -0.33
HIST1H2BDP58876 MIR4466-201ENST00000606121 54 ntBASIC12.99□□□□□ -0.33
HIST1H2BDP58876 AL589743.5-201ENST00000616611 1050 ntBASIC12.99□□□□□ -0.33
HIST1H2BDP58876 TFG-210ENST00000620299 1289 ntTSL 5 BASIC12.99□□□□□ -0.33
HIST1H2BDP58876 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC12.99□□□□□ -0.33
HIST1H2BDP58876 FSIP1-201ENST00000350221 2805 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
HIST1H2BDP58876 TGFB1-201ENST00000221930 2769 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
HIST1H2BDP58876 TMEM189-203ENST00000371656 1973 ntTSL 2 BASIC12.99□□□□□ -0.33
HIST1H2BDP58876 ANKRD33-201ENST00000301190 1935 ntTSL 2 BASIC12.99□□□□□ -0.33
HIST1H2BDP58876 SPATS2L-209ENST00000409988 2698 ntAPPRIS P1 TSL 2 BASIC12.99□□□□□ -0.33
HIST1H2BDP58876 CHRNB4-201ENST00000261751 2623 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
HIST1H2BDP58876 UVSSA-206ENST00000507531 2597 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
HIST1H2BDP58876 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
HIST1H2BDP58876 EVA1A-205ENST00000410113 1747 ntAPPRIS P2 TSL 3 BASIC12.99□□□□□ -0.33
HIST1H2BDP58876 FGR-202ENST00000374004 2350 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
HIST1H2BDP58876 SLC30A5-202ENST00000396591 4360 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
HIST1H2BDP58876 TAPBP-238ENST00000475304 1686 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
HIST1H2BDP58876 AC067930.6-201ENST00000623257 4947 ntBASIC12.99□□□□□ -0.33
HIST1H2BDP58876 ABHD14B-201ENST00000315877 2236 ntTSL 5 BASIC12.98□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 39.3 ms