Protein–RNA interactions for Protein: P56645

PER3, Period circadian protein homolog 3, humanhuman

Predictions only

Length 1,201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PER3P56645 ZMIZ1-201ENST00000334512 7546 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
PER3P56645 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
PER3P56645 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
PER3P56645 AC135776.1-201ENST00000319817 2481 ntBASIC16.05■□□□□ 0.16
PER3P56645 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
PER3P56645 ZNF454-201ENST00000320129 2332 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
PER3P56645 KCNC1-202ENST00000379472 7965 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
PER3P56645 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC16.04■□□□□ 0.16
PER3P56645 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
PER3P56645 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
PER3P56645 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
PER3P56645 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC16.04■□□□□ 0.16
PER3P56645 ARHGAP8-201ENST00000336963 1487 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
PER3P56645 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
PER3P56645 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
PER3P56645 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
PER3P56645 LINC02138-201ENST00000378340 1326 ntTSL 2 BASIC16.04■□□□□ 0.16
PER3P56645 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
PER3P56645 ELOF1-201ENST00000252445 1019 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
PER3P56645 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
PER3P56645 PMP22-202ENST00000395936 816 ntTSL 3 BASIC16.04■□□□□ 0.16
PER3P56645 KIRREL3-AS3-201ENST00000404882 831 ntBASIC16.04■□□□□ 0.16
PER3P56645 COA5-202ENST00000409997 557 ntTSL 4 BASIC16.04■□□□□ 0.16
PER3P56645 AC004832.2-201ENST00000426397 482 ntBASIC16.04■□□□□ 0.16
PER3P56645 SRP19-202ENST00000445150 833 ntTSL 2 BASIC16.04■□□□□ 0.16
PER3P56645 MTCL1P1-201ENST00000446207 792 ntBASIC16.04■□□□□ 0.16
PER3P56645 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC16.04■□□□□ 0.16
PER3P56645 AC068472.1-201ENST00000474589 881 ntBASIC16.04■□□□□ 0.16
PER3P56645 AC112482.1-201ENST00000492080 688 ntBASIC16.04■□□□□ 0.16
PER3P56645 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC16.04■□□□□ 0.16
PER3P56645 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC16.04■□□□□ 0.16
PER3P56645 AP000763.4-201ENST00000544674 752 ntTSL 5 BASIC16.04■□□□□ 0.16
PER3P56645 SART3-203ENST00000546611 1184 ntBASIC16.04■□□□□ 0.16
PER3P56645 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC16.04■□□□□ 0.16
PER3P56645 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC16.04■□□□□ 0.16
PER3P56645 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC16.04■□□□□ 0.16
PER3P56645 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC16.04■□□□□ 0.16
PER3P56645 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC16.04■□□□□ 0.16
PER3P56645 AC005256.1-202ENST00000592934 415 ntTSL 2 BASIC16.04■□□□□ 0.16
PER3P56645 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
PER3P56645 CD24-201ENST00000606017 2180 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
PER3P56645 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
PER3P56645 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
PER3P56645 STOX1-201ENST00000298596 3377 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
PER3P56645 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
PER3P56645 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC16.04■□□□□ 0.16
PER3P56645 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC16.04■□□□□ 0.16
PER3P56645 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
PER3P56645 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC16.03■□□□□ 0.16
PER3P56645 AKIRIN1-202ENST00000432648 2741 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
PER3P56645 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
PER3P56645 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
PER3P56645 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
PER3P56645 AQP10-203ENST00000484864 2262 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
PER3P56645 PARP9-204ENST00000471785 3040 ntAPPRIS ALT2 TSL 2 BASIC16.03■□□□□ 0.16
PER3P56645 KIAA2026-202ENST00000399933 6988 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
PER3P56645 ZFP90-203ENST00000563169 2512 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
PER3P56645 ADRB1-201ENST00000369295 2853 ntAPPRIS P1 BASIC16.03■□□□□ 0.16
PER3P56645 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC16.03■□□□□ 0.16
PER3P56645 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
PER3P56645 GDF5-201ENST00000374369 2383 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
PER3P56645 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC16.03■□□□□ 0.16
PER3P56645 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
PER3P56645 HSPB1-201ENST00000248553 909 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
PER3P56645 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
PER3P56645 KRT18P65-201ENST00000439811 1286 ntBASIC16.03■□□□□ 0.16
PER3P56645 FIS1-203ENST00000442303 631 ntTSL 3 BASIC16.03■□□□□ 0.16
PER3P56645 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC16.03■□□□□ 0.16
PER3P56645 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC16.03■□□□□ 0.16
PER3P56645 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC16.03■□□□□ 0.16
PER3P56645 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
PER3P56645 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC16.03■□□□□ 0.16
PER3P56645 MTDHP5-201ENST00000598980 586 ntBASIC16.03■□□□□ 0.16
PER3P56645 AC134684.3-201ENST00000641758 218 ntBASIC16.03■□□□□ 0.16
PER3P56645 COBL-201ENST00000265136 5291 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
PER3P56645 AL118508.1-201ENST00000613502 2345 ntBASIC16.03■□□□□ 0.16
PER3P56645 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC16.03■□□□□ 0.16
PER3P56645 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC16.03■□□□□ 0.16
PER3P56645 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
PER3P56645 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
PER3P56645 VPS37C-201ENST00000301765 2865 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
PER3P56645 CDH23-205ENST00000398809 4533 ntTSL 5 BASIC16.03■□□□□ 0.16
PER3P56645 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
PER3P56645 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
PER3P56645 LINC01502-201ENST00000445997 2471 ntTSL 2 BASIC16.03■□□□□ 0.16
PER3P56645 SLC8B1-210ENST00000550047 2493 ntTSL 2 BASIC16.03■□□□□ 0.16
PER3P56645 AUNIP-201ENST00000374298 2116 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
PER3P56645 C15orf38-AP3S2-201ENST00000398333 2439 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
PER3P56645 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
PER3P56645 RECK-201ENST00000377966 4888 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
PER3P56645 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
PER3P56645 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
PER3P56645 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC16.02■□□□□ 0.16
PER3P56645 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
PER3P56645 ZNF451-203ENST00000370706 5268 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
PER3P56645 L2HGDH-202ENST00000267436 6414 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
PER3P56645 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.16
PER3P56645 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC16.02■□□□□ 0.16
PER3P56645 NFATC4-222ENST00000555590 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
PER3P56645 AC022898.2-201ENST00000616822 1312 ntBASIC16.02■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 39.8 ms