Protein–RNA interactions for Protein: P56377

AP1S2, AP-1 complex subunit sigma-2, humanhuman

Predictions only

Length 157 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S2P56377 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
AP1S2P56377 ZNF337-AS1-204ENST00000428254 817 ntTSL 5 BASIC16.82■□□□□ 0.28
AP1S2P56377 MAGI2-AS3-208ENST00000446159 670 ntTSL 3 BASIC16.82■□□□□ 0.28
AP1S2P56377 SKP2-204ENST00000508514 821 ntTSL 3 BASIC16.82■□□□□ 0.28
AP1S2P56377 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC16.82■□□□□ 0.28
AP1S2P56377 METRN-205ENST00000568415 612 ntAPPRIS ALT2 TSL 3 BASIC16.82■□□□□ 0.28
AP1S2P56377 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC16.82■□□□□ 0.28
AP1S2P56377 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC16.82■□□□□ 0.28
AP1S2P56377 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
AP1S2P56377 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
AP1S2P56377 TRAPPC11-201ENST00000334690 4552 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
AP1S2P56377 MOB3A-201ENST00000357066 3391 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
AP1S2P56377 MAGI3-201ENST00000307546 6430 ntTSL 5 BASIC16.82■□□□□ 0.28
AP1S2P56377 WNK2-201ENST00000297954 7138 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
AP1S2P56377 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
AP1S2P56377 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
AP1S2P56377 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
AP1S2P56377 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
AP1S2P56377 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC16.81■□□□□ 0.28
AP1S2P56377 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
AP1S2P56377 GPR89P-201ENST00000407924 1495 ntBASIC16.81■□□□□ 0.28
AP1S2P56377 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
AP1S2P56377 C6orf136-203ENST00000376473 1402 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
AP1S2P56377 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
AP1S2P56377 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
AP1S2P56377 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC16.81■□□□□ 0.28
AP1S2P56377 CEBPG-201ENST00000284000 4109 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
AP1S2P56377 GID4-202ENST00000376345 1391 ntTSL 3 BASIC16.81■□□□□ 0.28
AP1S2P56377 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
AP1S2P56377 GABRB2-202ENST00000353437 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
AP1S2P56377 S100A11-201ENST00000271638 594 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
AP1S2P56377 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
AP1S2P56377 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
AP1S2P56377 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
AP1S2P56377 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
AP1S2P56377 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
AP1S2P56377 TMEM33-208ENST00000513702 1092 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
AP1S2P56377 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC16.81■□□□□ 0.28
AP1S2P56377 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
AP1S2P56377 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC16.81■□□□□ 0.28
AP1S2P56377 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
AP1S2P56377 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
AP1S2P56377 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC16.81■□□□□ 0.28
AP1S2P56377 AL355877.3-201ENST00000622820 899 ntBASIC16.81■□□□□ 0.28
AP1S2P56377 AL022326.1-202ENST00000641533 845 ntBASIC16.81■□□□□ 0.28
AP1S2P56377 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
AP1S2P56377 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
AP1S2P56377 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC16.81■□□□□ 0.28
AP1S2P56377 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
AP1S2P56377 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
AP1S2P56377 ASB6-203ENST00000450050 4535 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
AP1S2P56377 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
AP1S2P56377 ADARB1-202ENST00000360697 6604 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
AP1S2P56377 AC106820.2-201ENST00000563775 3264 ntBASIC16.81■□□□□ 0.28
AP1S2P56377 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
AP1S2P56377 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC16.81■□□□□ 0.28
AP1S2P56377 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC16.81■□□□□ 0.28
AP1S2P56377 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC16.81■□□□□ 0.28
AP1S2P56377 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
AP1S2P56377 C6orf132-201ENST00000341865 6210 ntAPPRIS P2 TSL 5 BASIC16.81■□□□□ 0.28
AP1S2P56377 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC16.81■□□□□ 0.28
AP1S2P56377 ILVBL-209ENST00000534378 2067 ntTSL 5 BASIC16.81■□□□□ 0.28
AP1S2P56377 CDH23-205ENST00000398809 4533 ntTSL 5 BASIC16.8■□□□□ 0.28
AP1S2P56377 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
AP1S2P56377 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
AP1S2P56377 AC097637.2-201ENST00000624096 1997 ntBASIC16.8■□□□□ 0.28
AP1S2P56377 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
AP1S2P56377 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
AP1S2P56377 AL356309.3-201ENST00000624132 1934 ntBASIC16.8■□□□□ 0.28
AP1S2P56377 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
AP1S2P56377 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
AP1S2P56377 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
AP1S2P56377 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
AP1S2P56377 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC16.8■□□□□ 0.28
AP1S2P56377 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
AP1S2P56377 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
AP1S2P56377 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC16.8■□□□□ 0.28
AP1S2P56377 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC16.8■□□□□ 0.28
AP1S2P56377 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
AP1S2P56377 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC16.8■□□□□ 0.28
AP1S2P56377 REXO1L6P-202ENST00000619970 1078 ntBASIC16.8■□□□□ 0.28
AP1S2P56377 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
AP1S2P56377 ENC1-207ENST00000618628 5657 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
AP1S2P56377 AC080080.1-201ENST00000625121 2420 ntBASIC16.8■□□□□ 0.28
AP1S2P56377 ZNF414-202ENST00000393927 2300 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
AP1S2P56377 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
AP1S2P56377 TSPAN3-201ENST00000267970 6467 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
AP1S2P56377 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
AP1S2P56377 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC16.8■□□□□ 0.28
AP1S2P56377 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC16.8■□□□□ 0.28
AP1S2P56377 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
AP1S2P56377 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
AP1S2P56377 ZFP64-205ENST00000371518 1841 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
AP1S2P56377 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
AP1S2P56377 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
AP1S2P56377 ZDHHC8-202ENST00000334554 5046 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
AP1S2P56377 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
AP1S2P56377 PBK-201ENST00000301905 2118 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
AP1S2P56377 AC004817.3-201ENST00000602957 2129 ntBASIC16.79■□□□□ 0.28
AP1S2P56377 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 24.1 ms