Protein–RNA interactions for Protein: P54868

HMGCS2, Hydroxymethylglutaryl-CoA synthase, mitochondrial, humanhuman

Predictions only

Length 508 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS2P54868 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC19.81■□□□□ 0.76
HMGCS2P54868 NME9-203ENST00000383180 2133 ntTSL 2 BASIC19.81■□□□□ 0.76
HMGCS2P54868 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
HMGCS2P54868 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC19.81■□□□□ 0.76
HMGCS2P54868 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
HMGCS2P54868 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC19.81■□□□□ 0.76
HMGCS2P54868 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
HMGCS2P54868 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC19.8■□□□□ 0.76
HMGCS2P54868 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
HMGCS2P54868 ADRA1A-206ENST00000380586 2304 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
HMGCS2P54868 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
HMGCS2P54868 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC19.8■□□□□ 0.76
HMGCS2P54868 LY6G6C-201ENST00000375819 992 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
HMGCS2P54868 GRTP1-AS1-201ENST00000419199 867 ntTSL 5 BASIC19.8■□□□□ 0.76
HMGCS2P54868 AL022316.1-201ENST00000428765 572 ntTSL 4 BASIC19.8■□□□□ 0.76
HMGCS2P54868 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC19.8■□□□□ 0.76
HMGCS2P54868 CNN2P2-201ENST00000443536 909 ntBASIC19.8■□□□□ 0.76
HMGCS2P54868 CNN2P3-201ENST00000450201 906 ntBASIC19.8■□□□□ 0.76
HMGCS2P54868 GALNT9-208ENST00000541995 1001 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
HMGCS2P54868 AC108010.1-201ENST00000605862 1107 ntTSL 5 BASIC19.8■□□□□ 0.76
HMGCS2P54868 AL136317.3-201ENST00000618497 906 ntBASIC19.8■□□□□ 0.76
HMGCS2P54868 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC19.8■□□□□ 0.76
HMGCS2P54868 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
HMGCS2P54868 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
HMGCS2P54868 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
HMGCS2P54868 TSSK3-201ENST00000373534 1368 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
HMGCS2P54868 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
HMGCS2P54868 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC19.8■□□□□ 0.76
HMGCS2P54868 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC19.8■□□□□ 0.76
HMGCS2P54868 LRRC42-201ENST00000319223 1727 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
HMGCS2P54868 AKAP8P1-201ENST00000434743 1349 ntBASIC19.79■□□□□ 0.76
HMGCS2P54868 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
HMGCS2P54868 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
HMGCS2P54868 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC19.79■□□□□ 0.76
HMGCS2P54868 OCIAD1-213ENST00000508293 1423 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
HMGCS2P54868 S100A14-204ENST00000368702 1218 ntAPPRIS P1 TSL 3 BASIC19.79■□□□□ 0.76
HMGCS2P54868 AL354836.1-201ENST00000414042 681 ntTSL 2 BASIC19.79■□□□□ 0.76
HMGCS2P54868 GPS2P2-201ENST00000430745 888 ntBASIC19.79■□□□□ 0.76
HMGCS2P54868 S100A14-206ENST00000476873 1025 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
HMGCS2P54868 AC090515.4-201ENST00000558042 450 ntTSL 3 BASIC19.79■□□□□ 0.76
HMGCS2P54868 INO80E-210ENST00000567705 880 ntTSL 3 BASIC19.79■□□□□ 0.76
HMGCS2P54868 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC19.79■□□□□ 0.76
HMGCS2P54868 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
HMGCS2P54868 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
HMGCS2P54868 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC19.79■□□□□ 0.76
HMGCS2P54868 SNX1-213ENST00000561026 1374 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
HMGCS2P54868 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC19.79■□□□□ 0.76
HMGCS2P54868 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
HMGCS2P54868 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC19.79■□□□□ 0.76
HMGCS2P54868 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC19.79■□□□□ 0.76
HMGCS2P54868 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
HMGCS2P54868 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
HMGCS2P54868 SFN-201ENST00000339276 1320 ntAPPRIS P1 BASIC19.78■□□□□ 0.76
HMGCS2P54868 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC19.78■□□□□ 0.76
HMGCS2P54868 ANXA8-203ENST00000583874 1860 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
HMGCS2P54868 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC19.78■□□□□ 0.76
HMGCS2P54868 CABP5-201ENST00000293255 1257 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
HMGCS2P54868 PRRT3-AS1-201ENST00000431558 614 ntTSL 2 BASIC19.78■□□□□ 0.76
HMGCS2P54868 SPCS2P4-201ENST00000436160 681 ntBASIC19.78■□□□□ 0.76
HMGCS2P54868 TSPAN32-207ENST00000451520 1236 ntAPPRIS ALT2 TSL 2 BASIC19.78■□□□□ 0.76
HMGCS2P54868 PRICKLE2-AS1-203ENST00000476308 623 ntTSL 2 BASIC19.78■□□□□ 0.76
HMGCS2P54868 AC069262.1-201ENST00000539058 672 ntBASIC19.78■□□□□ 0.76
HMGCS2P54868 FAM177A1-207ENST00000554052 540 ntAPPRIS ALT2 TSL 2 BASIC19.78■□□□□ 0.76
HMGCS2P54868 AC009053.3-201ENST00000567148 574 ntTSL 4 BASIC19.78■□□□□ 0.76
HMGCS2P54868 AC005412.3-201ENST00000580309 715 ntBASIC19.78■□□□□ 0.76
HMGCS2P54868 AC138761.1-201ENST00000584393 385 ntBASIC19.78■□□□□ 0.76
HMGCS2P54868 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC19.78■□□□□ 0.76
HMGCS2P54868 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC19.78■□□□□ 0.76
HMGCS2P54868 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC19.78■□□□□ 0.76
HMGCS2P54868 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC19.78■□□□□ 0.76
HMGCS2P54868 AL355312.1-201ENST00000407115 2176 ntBASIC19.78■□□□□ 0.76
HMGCS2P54868 CLDN4-201ENST00000340958 1831 ntAPPRIS P1 BASIC19.78■□□□□ 0.76
HMGCS2P54868 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC19.78■□□□□ 0.76
HMGCS2P54868 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
HMGCS2P54868 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
HMGCS2P54868 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC19.78■□□□□ 0.76
HMGCS2P54868 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC19.78■□□□□ 0.76
HMGCS2P54868 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC19.78■□□□□ 0.76
HMGCS2P54868 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
HMGCS2P54868 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
HMGCS2P54868 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
HMGCS2P54868 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC19.77■□□□□ 0.76
HMGCS2P54868 AC012569.1-201ENST00000591191 1524 ntBASIC19.77■□□□□ 0.76
HMGCS2P54868 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC19.77■□□□□ 0.76
HMGCS2P54868 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.76
HMGCS2P54868 OSTC-201ENST00000361564 1077 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
HMGCS2P54868 HDAC8-202ENST00000373556 704 ntTSL 2 BASIC19.77■□□□□ 0.76
HMGCS2P54868 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC19.77■□□□□ 0.76
HMGCS2P54868 FAM221A-202ENST00000409192 888 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
HMGCS2P54868 AL022068.1-202ENST00000432171 794 ntTSL 3 BASIC19.77■□□□□ 0.76
HMGCS2P54868 AC021744.1-201ENST00000518354 453 ntTSL 3 BASIC19.77■□□□□ 0.76
HMGCS2P54868 AQP6-203ENST00000551733 849 ntTSL 3 BASIC19.77■□□□□ 0.76
HMGCS2P54868 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
HMGCS2P54868 AC051619.7-201ENST00000568314 623 ntBASIC19.77■□□□□ 0.76
HMGCS2P54868 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
HMGCS2P54868 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC19.77■□□□□ 0.76
HMGCS2P54868 FSTL3-202ENST00000588773 746 ntTSL 2 BASIC19.77■□□□□ 0.76
HMGCS2P54868 AC243571.2-201ENST00000615265 628 ntTSL 3 BASIC19.77■□□□□ 0.76
HMGCS2P54868 AP001059.3-201ENST00000619053 235 ntBASIC19.77■□□□□ 0.76
HMGCS2P54868 AL161645.1-201ENST00000622716 1255 ntBASIC19.77■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 51.8 ms